RNA–Protein interactions for RNA: ENST00000299299.3

PCBD1-201, Transcript of pterin-4 alpha-carbinolamine dehydratase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCBD1, Length 1,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBD1-201ENST00000299299 DDX21Q9NR30 783 aaKnown RBP eCLIP17.37■□□□□ 0.37
PCBD1-201ENST00000299299 ZC3H4Q9UPT8 1303 aaKnown RBP17.37■□□□□ 0.37
PCBD1-201ENST00000299299 ELL2O00472 640 aaPredicted RBP17.36■□□□□ 0.37
PCBD1-201ENST00000299299 AIMP1Q12904 312 aaKnown RBP17.36■□□□□ 0.37
PCBD1-201ENST00000299299 TWISTNBQ3B726 338 aaPredicted RBP17.36■□□□□ 0.37
PCBD1-201ENST00000299299 STYK1Q6J9G0 422 aa17.36■□□□□ 0.37
PCBD1-201ENST00000299299 GIGYF2Q6Y7W6 1299 aaKnown RBP17.36■□□□□ 0.37
PCBD1-201ENST00000299299 NUTM1Q86Y26 1132 aa17.36■□□□□ 0.37
PCBD1-201ENST00000299299 NYXQ9GZU5 481 aa17.36■□□□□ 0.37
PCBD1-201ENST00000299299 VAMP4O75379 141 aa17.35■□□□□ 0.37
PCBD1-201ENST00000299299 GTF2E1P29083 439 aaPredicted RBP17.35■□□□□ 0.37
PCBD1-201ENST00000299299 COL13A1Q5TAT6 717 aaPredicted RBP17.35■□□□□ 0.37
PCBD1-201ENST00000299299 PRPF40BQ6NWY9 871 aaKnown RBP17.35■□□□□ 0.37
PCBD1-201ENST00000299299 COPS6Q7L5N1 327 aa17.35■□□□□ 0.37
PCBD1-201ENST00000299299 ZNF34Q8IZ26 560 aa17.35■□□□□ 0.37
PCBD1-201ENST00000299299 MASTLQ96GX5 879 aa17.35■□□□□ 0.37
PCBD1-201ENST00000299299 TIAM2Q8IVF5 1701 aa17.35■□□□□ 0.37
PCBD1-201ENST00000299299 NFKBIEO00221 500 aa17.34■□□□□ 0.37
PCBD1-201ENST00000299299 NTSR2O95665 410 aa17.34■□□□□ 0.37
PCBD1-201ENST00000299299 CCDC88AQ3V6T2 1871 aa17.34■□□□□ 0.37
PCBD1-201ENST00000299299 RIC1Q4ADV7 1423 aa17.34■□□□□ 0.37
PCBD1-201ENST00000299299 ERFEQ4G0M1 354 aa17.34■□□□□ 0.37
PCBD1-201ENST00000299299 SUSD4Q5VX71 490 aa17.34■□□□□ 0.37
PCBD1-201ENST00000299299 CNKSR1Q969H4 720 aa17.34■□□□□ 0.37
PCBD1-201ENST00000299299 ZNF219Q9P2Y4 722 aaPredicted RBP17.34■□□□□ 0.37
PCBD1-201ENST00000299299 KLRG2A4D1S0 409 aaPredicted RBP17.33■□□□□ 0.36
PCBD1-201ENST00000299299 C21orf2O43822 256 aa17.33■□□□□ 0.36
PCBD1-201ENST00000299299 CAPN15O75808 1086 aa17.33■□□□□ 0.36
PCBD1-201ENST00000299299 CT47B1P0C2W7 299 aaPredicted RBP17.33■□□□□ 0.36
PCBD1-201ENST00000299299 TNS4Q8IZW8 715 aa17.33■□□□□ 0.36
PCBD1-201ENST00000299299 DBF4Q9UBU7 674 aaPredicted RBP17.33■□□□□ 0.36
PCBD1-201ENST00000299299 NPR1P16066 1061 aa17.32■□□□□ 0.36
PCBD1-201ENST00000299299 LMNB1P20700 586 aa17.32■□□□□ 0.36
PCBD1-201ENST00000299299 PARP10Q53GL7 1025 aa17.32■□□□□ 0.36
PCBD1-201ENST00000299299 NUP98P52948 1817 aa17.31■□□□□ 0.36
PCBD1-201ENST00000299299 VEGFAP15692 232 aaPredicted RBP17.31■□□□□ 0.36
PCBD1-201ENST00000299299 PRELPP51888 382 aa17.31■□□□□ 0.36
PCBD1-201ENST00000299299 HSP90AB3PQ58FF7 597 aa17.31■□□□□ 0.36
PCBD1-201ENST00000299299 CRY2Q49AN0 593 aa17.3■□□□□ 0.36
PCBD1-201ENST00000299299 PPP1R42Q7Z4L9 355 aa17.3■□□□□ 0.36
PCBD1-201ENST00000299299 ARFGEF2Q9Y6D5 1785 aa17.3■□□□□ 0.36
PCBD1-201ENST00000299299 GLTPD2A6NH11 291 aa17.29■□□□□ 0.36
PCBD1-201ENST00000299299 ZNF428Q96B54 188 aa17.29■□□□□ 0.36
PCBD1-201ENST00000299299 UTP14AQ9BVJ6 771 aaKnown RBP17.29■□□□□ 0.36
PCBD1-201ENST00000299299 HYPKQ9NX55 129 aa17.29■□□□□ 0.36
PCBD1-201ENST00000299299 SOGA3Q5TF21 947 aa17.28■□□□□ 0.36
PCBD1-201ENST00000299299 CCDC30Q5VVM6 783 aa17.28■□□□□ 0.36
PCBD1-201ENST00000299299 C3orf67Q6ZVT6 689 aa17.28■□□□□ 0.36
PCBD1-201ENST00000299299 NLRP10Q86W26 655 aa17.28■□□□□ 0.36
PCBD1-201ENST00000299299 PLBD2Q8NHP8 589 aa17.28■□□□□ 0.36
PCBD1-201ENST00000299299 TAOK3Q9H2K8 898 aa17.28■□□□□ 0.36
PCBD1-201ENST00000299299 ANKRD36CQ5JPF3 1778 aa17.28■□□□□ 0.36
PCBD1-201ENST00000299299 RNF123Q5XPI4 1314 aa17.27■□□□□ 0.36
PCBD1-201ENST00000299299 SLX4Q8IY92 1834 aa17.27■□□□□ 0.36
PCBD1-201ENST00000299299 TCERG1O14776 1098 aaKnown RBP17.27■□□□□ 0.36
PCBD1-201ENST00000299299 RARSP54136 660 aaKnown RBP17.27■□□□□ 0.36
PCBD1-201ENST00000299299 TCIRG1Q13488 830 aa17.27■□□□□ 0.36
PCBD1-201ENST00000299299 CCDC93Q567U6 631 aa17.27■□□□□ 0.36
PCBD1-201ENST00000299299 RPGRQ92834 1020 aaKnown RBP17.27■□□□□ 0.36
PCBD1-201ENST00000299299 LTBP3Q9NS15 1303 aa17.26■□□□□ 0.35
PCBD1-201ENST00000299299 HSPA1AP0DMV8 641 aaKnown RBP17.26■□□□□ 0.35
PCBD1-201ENST00000299299 HSPA1BP0DMV9 641 aaKnown RBP17.26■□□□□ 0.35
PCBD1-201ENST00000299299 ALDH1L2Q3SY69 923 aa17.26■□□□□ 0.35
PCBD1-201ENST00000299299 DPY19L2Q6NUT2 758 aa17.26■□□□□ 0.35
PCBD1-201ENST00000299299 OLFM4Q6UX06 510 aa17.26■□□□□ 0.35
PCBD1-201ENST00000299299 ANKRD13DQ6ZTN6 518 aa17.26■□□□□ 0.35
PCBD1-201ENST00000299299 C7orf43Q8WVR3 580 aa17.26■□□□□ 0.35
PCBD1-201ENST00000299299 SSH1Q8WYL5 1049 aa17.26■□□□□ 0.35
PCBD1-201ENST00000299299 CHMP4AQ9BY43 222 aa17.26■□□□□ 0.35
PCBD1-201ENST00000299299 CACNA1SQ13698 1873 aa17.25■□□□□ 0.35
PCBD1-201ENST00000299299 PHAXQ9H814 394 aaKnown RBP17.25■□□□□ 0.35
PCBD1-201ENST00000299299 RCAN3Q9UKA8 241 aa17.25■□□□□ 0.35
PCBD1-201ENST00000299299 DICER1Q9UPY3 1922 aaKnown RBP17.25■□□□□ 0.35
PCBD1-201ENST00000299299 SH3TC1Q8TE82 1336 aa17.24■□□□□ 0.35
PCBD1-201ENST00000299299 SNED1Q8TER0 1413 aa17.24■□□□□ 0.35
PCBD1-201ENST00000299299 ATP5J2-PTCD1G3V325 749 aa17.24■□□□□ 0.35
PCBD1-201ENST00000299299 ALDH1B1P30837 517 aa17.24■□□□□ 0.35
PCBD1-201ENST00000299299 SLC51AQ86UW1 340 aa17.24■□□□□ 0.35
PCBD1-201ENST00000299299 ISCA1Q9BUE6 129 aa17.24■□□□□ 0.35
PCBD1-201ENST00000299299 STK31Q9BXU1 1019 aa17.24■□□□□ 0.35
PCBD1-201ENST00000299299 TRMT112Q9UI30 125 aaKnown RBP17.24■□□□□ 0.35
PCBD1-201ENST00000299299 FER1L6Q2WGJ9 1857 aa17.23■□□□□ 0.35
PCBD1-201ENST00000299299 HCLS1P14317 486 aaPredicted RBP17.23■□□□□ 0.35
PCBD1-201ENST00000299299 RIC3Q7Z5B4 369 aa17.23■□□□□ 0.35
PCBD1-201ENST00000299299 SYNE4Q8N205 404 aa17.23■□□□□ 0.35
PCBD1-201ENST00000299299 MRPL50Q8N5N7 158 aaKnown RBP17.23■□□□□ 0.35
PCBD1-201ENST00000299299 BCL2L13Q9BXK5 485 aa17.23■□□□□ 0.35
PCBD1-201ENST00000299299 PPEF1O14829 653 aaPredicted RBP17.22■□□□□ 0.35
PCBD1-201ENST00000299299 BCAR3O75815 825 aa17.22■□□□□ 0.35
PCBD1-201ENST00000299299 SLC4A2P04920 1241 aa17.22■□□□□ 0.35
PCBD1-201ENST00000299299 HOXA10P31260 410 aaPredicted RBP17.22■□□□□ 0.35
PCBD1-201ENST00000299299 BRPF1P55201 1214 aaPredicted RBP17.22■□□□□ 0.35
PCBD1-201ENST00000299299 RBM17Q96I25 401 aaKnown RBP17.22■□□□□ 0.35
PCBD1-201ENST00000299299 NLRP3Q96P20 1036 aa17.22■□□□□ 0.35
PCBD1-201ENST00000299299 SMC4Q9NTJ3 1288 aa17.22■□□□□ 0.35
PCBD1-201ENST00000299299 FKBP4Q02790 459 aaKnown RBP eCLIP17.21■□□□□ 0.35
PCBD1-201ENST00000299299 SLC10A5Q5PT55 438 aa17.21■□□□□ 0.35
PCBD1-201ENST00000299299 G2E3Q7L622 706 aa17.21■□□□□ 0.35
PCBD1-201ENST00000299299 ABCC4O15439 1325 aa17.21■□□□□ 0.34
PCBD1-201ENST00000299299 CENPBP07199 599 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms