RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 RANBP6O60518 1105 aaKnown RBP12.09□□□□□ -0.47
GABRB3-201ENST00000299267 DTNBO60941 627 aa12.09□□□□□ -0.47
GABRB3-201ENST00000299267 TBC1D2Q9BYX2 928 aa12.09□□□□□ -0.47
GABRB3-201ENST00000299267 GOLGA6L6A8MZA4 724 aa12.09□□□□□ -0.47
GABRB3-201ENST00000299267 TAF5LO75529 589 aa12.09□□□□□ -0.47
GABRB3-201ENST00000299267 IL15P40933 162 aaPredicted RBP12.09□□□□□ -0.47
GABRB3-201ENST00000299267 GUCY1B3Q02153 619 aa12.09□□□□□ -0.47
GABRB3-201ENST00000299267 GSE1Q14687 1217 aa12.09□□□□□ -0.47
GABRB3-201ENST00000299267 CCDC34Q96HJ3 373 aa12.09□□□□□ -0.47
GABRB3-201ENST00000299267 CDCA7Q9BWT1 371 aaPredicted RBP12.09□□□□□ -0.47
GABRB3-201ENST00000299267 APBA3O96018 575 aa12.09□□□□□ -0.47
GABRB3-201ENST00000299267 CCT2P78371 535 aaKnown RBP12.09□□□□□ -0.47
GABRB3-201ENST00000299267 CCDC87Q9NVE4 849 aa12.09□□□□□ -0.47
GABRB3-201ENST00000299267 CCDC69A6NI79 296 aa12.08□□□□□ -0.48
GABRB3-201ENST00000299267 ERVV-2B6SEH9 535 aa12.08□□□□□ -0.48
GABRB3-201ENST00000299267 MCM2P49736 904 aa12.08□□□□□ -0.48
GABRB3-201ENST00000299267 POLR3DP05423 398 aaPredicted RBP12.08□□□□□ -0.48
GABRB3-201ENST00000299267 MSNP26038 577 aaKnown RBP12.08□□□□□ -0.48
GABRB3-201ENST00000299267 CAVIN1Q6NZI2 390 aaKnown RBP12.08□□□□□ -0.48
GABRB3-201ENST00000299267 U3KPZ7 1027 aaPredicted RBP12.08□□□□□ -0.48
GABRB3-201ENST00000299267 SOS1Q07889 1333 aaPredicted RBP12.08□□□□□ -0.48
GABRB3-201ENST00000299267 SYNMO15061 1565 aa12.08□□□□□ -0.48
GABRB3-201ENST00000299267 RIMBP2O15034 1052 aa12.08□□□□□ -0.48
GABRB3-201ENST00000299267 ITGA6P23229 1130 aa12.08□□□□□ -0.48
GABRB3-201ENST00000299267 CCDC144CPQ8IYA2 1237 aa12.08□□□□□ -0.48
GABRB3-201ENST00000299267 DBNDD2Q9BQY9 259 aa12.08□□□□□ -0.48
GABRB3-201ENST00000299267 ZNF521Q96K83 1311 aa12.08□□□□□ -0.48
GABRB3-201ENST00000299267 BECN2A8MW95 431 aa12.07□□□□□ -0.48
GABRB3-201ENST00000299267 SLC9C2Q5TAH2 1124 aa12.07□□□□□ -0.48
GABRB3-201ENST00000299267 ZBTB1Q9Y2K1 713 aa12.07□□□□□ -0.48
GABRB3-201ENST00000299267 SH3TC1Q8TE82 1336 aa12.07□□□□□ -0.48
GABRB3-201ENST00000299267 ZNF213O14771 459 aa12.07□□□□□ -0.48
GABRB3-201ENST00000299267 NRDCO43847 1150 aa12.07□□□□□ -0.48
GABRB3-201ENST00000299267 ST5P78524 1137 aa12.07□□□□□ -0.48
GABRB3-201ENST00000299267 CAMSAP1Q5T5Y3 1602 aa12.07□□□□□ -0.48
GABRB3-201ENST00000299267 TRIM37O94972 964 aa12.07□□□□□ -0.48
GABRB3-201ENST00000299267 LOC102724428A0A0B4J2F2 783 aa12.07□□□□□ -0.48
GABRB3-201ENST00000299267 MPHOSPH10O00566 681 aaKnown RBP12.07□□□□□ -0.48
GABRB3-201ENST00000299267 HOXB7P09629 217 aa12.07□□□□□ -0.48
GABRB3-201ENST00000299267 SIK1P57059 783 aa12.07□□□□□ -0.48
GABRB3-201ENST00000299267 C8orf34Q49A92 452 aa12.07□□□□□ -0.48
GABRB3-201ENST00000299267 MSL1Q68DK7 614 aa12.07□□□□□ -0.48
GABRB3-201ENST00000299267 EDC3Q96F86 508 aaKnown RBP12.07□□□□□ -0.48
GABRB3-201ENST00000299267 NAP1L5Q96NT1 182 aaPredicted RBP12.07□□□□□ -0.48
GABRB3-201ENST00000299267 MKNK2Q9HBH9 465 aa12.07□□□□□ -0.48
GABRB3-201ENST00000299267 ADAMTS13Q76LX8 1427 aa12.07□□□□□ -0.48
GABRB3-201ENST00000299267 SDF4Q9BRK5 362 aa12.06□□□□□ -0.48
GABRB3-201ENST00000299267 BABAM1Q9NWV8 329 aa12.06□□□□□ -0.48
GABRB3-201ENST00000299267 TRAK2O60296 914 aa12.06□□□□□ -0.48
GABRB3-201ENST00000299267 TRMT2AQ8IZ69 625 aaKnown RBP12.06□□□□□ -0.48
GABRB3-201ENST00000299267 LMTK2Q8IWU2 1503 aa12.06□□□□□ -0.48
GABRB3-201ENST00000299267 MIGA1Q8NAN2 632 aa12.06□□□□□ -0.48
GABRB3-201ENST00000299267 PIGBQ92521 554 aa12.06□□□□□ -0.48
GABRB3-201ENST00000299267 NEURL1BA8MQ27 555 aa12.05□□□□□ -0.48
GABRB3-201ENST00000299267 CHST3Q7LGC8 479 aa12.05□□□□□ -0.48
GABRB3-201ENST00000299267 CCDC191Q8NCU4 936 aa12.05□□□□□ -0.48
GABRB3-201ENST00000299267 PDCP20941 246 aa12.05□□□□□ -0.48
GABRB3-201ENST00000299267 A0A1B0GUL7 405 aa12.05□□□□□ -0.48
GABRB3-201ENST00000299267 SKOR2Q2VWA4 1001 aaPredicted RBP12.05□□□□□ -0.48
GABRB3-201ENST00000299267 CCDC73Q6ZRK6 1079 aa12.05□□□□□ -0.48
GABRB3-201ENST00000299267 ANO8Q9HCE9 1232 aaPredicted RBP12.05□□□□□ -0.48
GABRB3-201ENST00000299267 CYP7A1P22680 504 aa12.04□□□□□ -0.48
GABRB3-201ENST00000299267 KRT32Q14532 448 aa12.04□□□□□ -0.48
GABRB3-201ENST00000299267 ANKRD1Q15327 319 aa12.04□□□□□ -0.48
GABRB3-201ENST00000299267 NECAB1Q8N987 351 aa12.04□□□□□ -0.48
GABRB3-201ENST00000299267 CNBD1Q8NA66 436 aa12.04□□□□□ -0.48
GABRB3-201ENST00000299267 CPA1P15085 419 aa12.04□□□□□ -0.48
GABRB3-201ENST00000299267 NMIQ13287 307 aaPredicted RBP12.04□□□□□ -0.48
GABRB3-201ENST00000299267 TPD52L1Q16890 204 aaPredicted RBP12.04□□□□□ -0.48
GABRB3-201ENST00000299267 TBC1D32Q96NH3 1257 aa12.04□□□□□ -0.48
GABRB3-201ENST00000299267 ESYT1Q9BSJ8 1104 aa12.04□□□□□ -0.48
GABRB3-201ENST00000299267 PTPRUQ92729 1446 aa12.04□□□□□ -0.48
GABRB3-201ENST00000299267 GOLGA6L19H0YKK7 550 aa12.03□□□□□ -0.48
GABRB3-201ENST00000299267 EYA2O00167 538 aa12.03□□□□□ -0.48
GABRB3-201ENST00000299267 XBP1P17861 261 aa12.03□□□□□ -0.48
GABRB3-201ENST00000299267 TRIM22Q8IYM9 498 aa12.03□□□□□ -0.48
GABRB3-201ENST00000299267 PAG1Q9NWQ8 432 aa12.03□□□□□ -0.48
GABRB3-201ENST00000299267 TCIRG1Q13488 830 aa12.03□□□□□ -0.48
GABRB3-201ENST00000299267 SMIM5Q71RC9 77 aa12.03□□□□□ -0.48
GABRB3-201ENST00000299267 CRACR2BQ8N4Y2 399 aaPredicted RBP12.03□□□□□ -0.48
GABRB3-201ENST00000299267 TCEAL9Q9UHQ7 104 aa12.03□□□□□ -0.48
GABRB3-201ENST00000299267 PTPRMP28827 1452 aa12.03□□□□□ -0.48
GABRB3-201ENST00000299267 TULP4Q9NRJ4 1543 aa12.03□□□□□ -0.48
GABRB3-201ENST00000299267 ZNF853P0CG23 659 aa12.03□□□□□ -0.48
GABRB3-201ENST00000299267 STK38Q15208 465 aa12.03□□□□□ -0.48
GABRB3-201ENST00000299267 BEND3Q5T5X7 828 aa12.03□□□□□ -0.48
GABRB3-201ENST00000299267 CCDC129Q6ZRS4 1044 aa12.03□□□□□ -0.48
GABRB3-201ENST00000299267 GDPD2Q9HCC8 539 aa12.03□□□□□ -0.48
GABRB3-201ENST00000299267 RBM8AQ9Y5S9 174 aaKnown RBP12.03□□□□□ -0.48
GABRB3-201ENST00000299267 PIK3C2BO00750 1634 aa12.03□□□□□ -0.48
GABRB3-201ENST00000299267 KDM4FA0A1W2PPD8 638 aa12.03□□□□□ -0.48
GABRB3-201ENST00000299267 IFIT3O14879 490 aaKnown RBP12.03□□□□□ -0.48
GABRB3-201ENST00000299267 MPNDQ8N594 471 aa12.02□□□□□ -0.48
GABRB3-201ENST00000299267 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.02□□□□□ -0.48
GABRB3-201ENST00000299267 NEXMIFQ5QGS0 1516 aa12.02□□□□□ -0.48
GABRB3-201ENST00000299267 MICU3Q86XE3 530 aa12.02□□□□□ -0.49
GABRB3-201ENST00000299267 PARP3Q9Y6F1 533 aa12.02□□□□□ -0.49
GABRB3-201ENST00000299267 RNF123Q5XPI4 1314 aa12.02□□□□□ -0.49
GABRB3-201ENST00000299267 ME1P48163 572 aa12.02□□□□□ -0.49
GABRB3-201ENST00000299267 ZC3H12CQ9C0D7 883 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms