RNA–Protein interactions for RNA: ENST00000299259.10

COPS2-201, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 1 (best) BASIC

Gene COPS2, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-201ENST00000299259 GIGYF2Q6Y7W6 1299 aaKnown RBP12.93□□□□□ -0.34
COPS2-201ENST00000299259 TBC1D9Q6ZT07 1266 aa12.93□□□□□ -0.34
COPS2-201ENST00000299259 ARXQ96QS3 562 aa12.93□□□□□ -0.34
COPS2-201ENST00000299259 MSH5O43196 834 aa12.93□□□□□ -0.34
COPS2-201ENST00000299259 CRKLP46109 303 aaKnown RBP12.93□□□□□ -0.34
COPS2-201ENST00000299259 ITPK1Q13572 414 aa12.93□□□□□ -0.34
COPS2-201ENST00000299259 HSP90AB3PQ58FF7 597 aa12.93□□□□□ -0.34
COPS2-201ENST00000299259 STAP2Q9UGK3 403 aa12.93□□□□□ -0.34
COPS2-201ENST00000299259 SDSP20132 328 aa12.92□□□□□ -0.34
COPS2-201ENST00000299259 TRIM28Q13263 835 aaKnown RBP12.92□□□□□ -0.34
COPS2-201ENST00000299259 TSHZ3Q63HK5 1081 aa12.92□□□□□ -0.34
COPS2-201ENST00000299259 DZIP3Q86Y13 1208 aaKnown RBP12.92□□□□□ -0.34
COPS2-201ENST00000299259 G3BP1Q13283 466 aaKnown RBP eCLIP12.91□□□□□ -0.34
COPS2-201ENST00000299259 INTS5Q6P9B9 1019 aaKnown RBP12.91□□□□□ -0.34
COPS2-201ENST00000299259 NUTM1Q86Y26 1132 aa12.91□□□□□ -0.34
COPS2-201ENST00000299259 CLASRPQ8N2M8 674 aaKnown RBP12.91□□□□□ -0.34
COPS2-201ENST00000299259 ERVV-1B6SEH8 477 aa12.91□□□□□ -0.34
COPS2-201ENST00000299259 EIF5P55010 431 aaKnown RBP12.91□□□□□ -0.34
COPS2-201ENST00000299259 FOXO4P98177 505 aa12.91□□□□□ -0.34
COPS2-201ENST00000299259 RTL5Q5HYW3 569 aaPredicted RBP12.91□□□□□ -0.34
COPS2-201ENST00000299259 CASC1Q6TDU7 716 aa12.91□□□□□ -0.34
COPS2-201ENST00000299259 SIL1Q9H173 461 aa12.91□□□□□ -0.34
COPS2-201ENST00000299259 COPRSQ9NQ92 184 aa12.91□□□□□ -0.34
COPS2-201ENST00000299259 EIF5BO60841 1220 aaKnown RBP12.9□□□□□ -0.34
COPS2-201ENST00000299259 RFX5P48382 616 aaPredicted RBP12.9□□□□□ -0.34
COPS2-201ENST00000299259 HLFQ16534 295 aa12.9□□□□□ -0.34
COPS2-201ENST00000299259 LMBR1LQ6UX01 489 aa12.9□□□□□ -0.34
COPS2-201ENST00000299259 CASZ1Q86V15 1759 aa12.9□□□□□ -0.34
COPS2-201ENST00000299259 ONECUT3O60422 494 aaPredicted RBP12.89□□□□□ -0.35
COPS2-201ENST00000299259 PCCAP05165 728 aaPredicted RBP12.89□□□□□ -0.35
COPS2-201ENST00000299259 KLHDC4Q8TBB5 520 aa12.89□□□□□ -0.35
COPS2-201ENST00000299259 C22orf23Q9BZE7 217 aa12.89□□□□□ -0.35
COPS2-201ENST00000299259 TBC1D2BQ9UPU7 963 aa12.89□□□□□ -0.35
COPS2-201ENST00000299259 CHMP3Q9Y3E7 222 aa12.89□□□□□ -0.35
COPS2-201ENST00000299259 USP42Q9H9J4 1324 aaKnown RBP12.89□□□□□ -0.35
COPS2-201ENST00000299259 DDX60Q8IY21 1712 aaKnown RBP12.89□□□□□ -0.35
COPS2-201ENST00000299259 SASH1O94885 1247 aa12.89□□□□□ -0.35
COPS2-201ENST00000299259 GPTP24298 496 aa12.89□□□□□ -0.35
COPS2-201ENST00000299259 SEPT12Q8IYM1 358 aa12.89□□□□□ -0.35
COPS2-201ENST00000299259 ZBTB38Q8NAP3 1195 aaPredicted RBP12.89□□□□□ -0.35
COPS2-201ENST00000299259 GPATCH3Q96I76 525 aa12.89□□□□□ -0.35
COPS2-201ENST00000299259 TTC41PQ6P2S7 1318 aa12.89□□□□□ -0.35
COPS2-201ENST00000299259 PTPN12Q05209 780 aaKnown RBP12.88□□□□□ -0.35
COPS2-201ENST00000299259 FAM182BQ5T319 152 aa12.88□□□□□ -0.35
COPS2-201ENST00000299259 NLRP10Q86W26 655 aa12.88□□□□□ -0.35
COPS2-201ENST00000299259 C4AP0C0L4 1744 aa12.88□□□□□ -0.35
COPS2-201ENST00000299259 C4BP0C0L5 1744 aa12.88□□□□□ -0.35
COPS2-201ENST00000299259 CDHR2Q9BYE9 1310 aa12.88□□□□□ -0.35
COPS2-201ENST00000299259 IFIT2P09913 472 aaKnown RBP12.88□□□□□ -0.35
COPS2-201ENST00000299259 PTF1AQ7RTS3 328 aa12.88□□□□□ -0.35
COPS2-201ENST00000299259 AACSQ86V21 672 aa12.88□□□□□ -0.35
COPS2-201ENST00000299259 LINC00116Q8NCU8 138 aa12.88□□□□□ -0.35
COPS2-201ENST00000299259 PI4K2BQ8TCG2 481 aa12.88□□□□□ -0.35
COPS2-201ENST00000299259 CNTNAP4Q9C0A0 1308 aa12.87□□□□□ -0.35
COPS2-201ENST00000299259 ERICH6Q7L0X2 663 aa12.87□□□□□ -0.35
COPS2-201ENST00000299259 PLA2G12BQ9BX93 195 aa12.87□□□□□ -0.35
COPS2-201ENST00000299259 QTRT2Q9H974 415 aaKnown RBP12.87□□□□□ -0.35
COPS2-201ENST00000299259 TRIM6-TRIM34B2RNG4 842 aa12.86□□□□□ -0.35
COPS2-201ENST00000299259 FAM89AQ96GI7 184 aa12.86□□□□□ -0.35
COPS2-201ENST00000299259 UBN2Q6ZU65 1347 aa12.86□□□□□ -0.35
COPS2-201ENST00000299259 SPEF2Q9C093 1822 aa12.86□□□□□ -0.35
COPS2-201ENST00000299259 LRP5O75197 1615 aa12.86□□□□□ -0.35
COPS2-201ENST00000299259 COL24A1Q17RW2 1714 aa12.86□□□□□ -0.35
COPS2-201ENST00000299259 ERC2O15083 957 aa12.86□□□□□ -0.35
COPS2-201ENST00000299259 GLRX3O76003 335 aaKnown RBP12.86□□□□□ -0.35
COPS2-201ENST00000299259 CAMTA2O94983 1202 aa12.86□□□□□ -0.35
COPS2-201ENST00000299259 RBM25P49756 843 aaKnown RBP12.86□□□□□ -0.35
COPS2-201ENST00000299259 ECHDC1Q9NTX5 307 aa12.86□□□□□ -0.35
COPS2-201ENST00000299259 ZNF34Q8IZ26 560 aa12.85□□□□□ -0.35
COPS2-201ENST00000299259 RILPL2Q969X0 211 aa12.85□□□□□ -0.35
COPS2-201ENST00000299259 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.85□□□□□ -0.35
COPS2-201ENST00000299259 EAF2Q96CJ1 260 aaPredicted RBP12.84□□□□□ -0.35
COPS2-201ENST00000299259 DAXXQ9UER7 740 aaPredicted RBP12.84□□□□□ -0.35
COPS2-201ENST00000299259 TRMT112Q9UI30 125 aaKnown RBP12.84□□□□□ -0.35
COPS2-201ENST00000299259 ZNF652Q9Y2D9 606 aa12.84□□□□□ -0.35
COPS2-201ENST00000299259 CNTROBQ8N137 903 aa12.84□□□□□ -0.35
COPS2-201ENST00000299259 CCNL1Q9UK58 526 aaPredicted RBP12.84□□□□□ -0.35
COPS2-201ENST00000299259 UBR3Q6ZT12 1888 aa12.84□□□□□ -0.35
COPS2-201ENST00000299259 ZNF609O15014 1411 aa12.83□□□□□ -0.36
COPS2-201ENST00000299259 REC8O95072 547 aa12.83□□□□□ -0.36
COPS2-201ENST00000299259 KCNQ4P56696 695 aa12.83□□□□□ -0.36
COPS2-201ENST00000299259 TFCP2Q12800 502 aa12.83□□□□□ -0.36
COPS2-201ENST00000299259 CCDC57Q2TAC2 916 aa12.83□□□□□ -0.36
COPS2-201ENST00000299259 TNNI3KQ59H18 835 aa12.83□□□□□ -0.36
COPS2-201ENST00000299259 CCDC8Q9H0W5 538 aaPredicted RBP12.83□□□□□ -0.36
COPS2-201ENST00000299259 TLR7Q9NYK1 1049 aaKnown RBP12.83□□□□□ -0.36
COPS2-201ENST00000299259 FPGT-TNNI3KV9GXZ4 949 aa12.83□□□□□ -0.36
COPS2-201ENST00000299259 IRS4O14654 1257 aaPredicted RBP12.83□□□□□ -0.36
COPS2-201ENST00000299259 CIAO1O76071 339 aa12.83□□□□□ -0.36
COPS2-201ENST00000299259 IL15P40933 162 aaPredicted RBP12.83□□□□□ -0.36
COPS2-201ENST00000299259 CTSWP56202 376 aa12.83□□□□□ -0.36
COPS2-201ENST00000299259 BECN1Q14457 450 aa12.83□□□□□ -0.36
COPS2-201ENST00000299259 PARP10Q53GL7 1025 aa12.83□□□□□ -0.36
COPS2-201ENST00000299259 EYA2O00167 538 aa12.82□□□□□ -0.36
COPS2-201ENST00000299259 MAP4K4O95819 1239 aaPredicted RBP12.82□□□□□ -0.36
COPS2-201ENST00000299259 CSF1RP07333 972 aa12.82□□□□□ -0.36
COPS2-201ENST00000299259 RC3H1Q5TC82 1133 aaKnown RBP12.82□□□□□ -0.36
COPS2-201ENST00000299259 ATG9AQ7Z3C6 839 aa12.82□□□□□ -0.36
COPS2-201ENST00000299259 SYNE4Q8N205 404 aa12.82□□□□□ -0.36
COPS2-201ENST00000299259 ARAP2Q8WZ64 1704 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms