RNA–Protein interactions for RNA: ENST00000299238.6

HPS6-201, Transcript of HPS6, biogenesis of lysosomal organelles complex 2 subunit 3, humanhuman

APPRIS P1 BASIC

Gene HPS6, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6-201ENST00000299238 INTS4Q96HW7 963 aaKnown RBP24.17■■□□□ 1.46
HPS6-201ENST00000299238 SLC52A2Q9HAB3 445 aa24.17■■□□□ 1.46
HPS6-201ENST00000299238 DDX21Q9NR30 783 aaKnown RBP eCLIP24.17■■□□□ 1.46
HPS6-201ENST00000299238 SLC39A6Q13433 755 aa24.17■■□□□ 1.46
HPS6-201ENST00000299238 ZNF790Q6PG37 636 aa24.17■■□□□ 1.46
HPS6-201ENST00000299238 USP42Q9H9J4 1324 aaKnown RBP24.17■■□□□ 1.46
HPS6-201ENST00000299238 SPG7Q9UQ90 795 aa24.16■■□□□ 1.46
HPS6-201ENST00000299238 SGSM2O43147 1006 aa24.16■■□□□ 1.46
HPS6-201ENST00000299238 BRD1O95696 1058 aa24.16■■□□□ 1.46
HPS6-201ENST00000299238 ZNF771Q7L3S4 317 aaPredicted RBP24.16■■□□□ 1.46
HPS6-201ENST00000299238 PKD1L3Q7Z443 1732 aa24.16■■□□□ 1.46
HPS6-201ENST00000299238 CSB-PGBD3P0DP91 1061 aa24.15■■□□□ 1.46
HPS6-201ENST00000299238 CDK11BP21127 795 aaKnown RBP24.15■■□□□ 1.46
HPS6-201ENST00000299238 GTF2F1P35269 517 aaKnown RBP eCLIP24.15■■□□□ 1.46
HPS6-201ENST00000299238 PDIA6Q15084 440 aa24.15■■□□□ 1.46
HPS6-201ENST00000299238 KIF3AQ9Y496 699 aa24.15■■□□□ 1.46
HPS6-201ENST00000299238 RAD50Q92878 1312 aa24.15■■□□□ 1.46
HPS6-201ENST00000299238 CADPS2Q86UW7 1296 aa24.15■■□□□ 1.46
HPS6-201ENST00000299238 PDCL2Q8N4E4 241 aa24.15■■□□□ 1.46
HPS6-201ENST00000299238 OS9Q13438 667 aaPredicted RBP24.14■■□□□ 1.46
HPS6-201ENST00000299238 PRIMPOLQ96LW4 560 aa24.14■■□□□ 1.46
HPS6-201ENST00000299238 TMEM63CQ9P1W3 806 aa24.14■■□□□ 1.46
HPS6-201ENST00000299238 MRC1P22897 1456 aa24.14■■□□□ 1.46
HPS6-201ENST00000299238 DDX58O95786 925 aaKnown RBP24.14■■□□□ 1.45
HPS6-201ENST00000299238 CHRNA2Q15822 529 aa24.14■■□□□ 1.45
HPS6-201ENST00000299238 LINS1Q8NG48 757 aa24.14■■□□□ 1.45
HPS6-201ENST00000299238 LARP6Q9BRS8 491 aaKnown RBP24.14■■□□□ 1.45
HPS6-201ENST00000299238 AIMP1Q12904 312 aaKnown RBP24.14■■□□□ 1.45
HPS6-201ENST00000299238 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.14■■□□□ 1.45
HPS6-201ENST00000299238 IRX5P78411 483 aaPredicted RBP24.13■■□□□ 1.45
HPS6-201ENST00000299238 HMGN5P82970 282 aaKnown RBP24.13■■□□□ 1.45
HPS6-201ENST00000299238 CNTROBQ8N137 903 aa24.13■■□□□ 1.45
HPS6-201ENST00000299238 NFATC2IPQ8NCF5 419 aa24.13■■□□□ 1.45
HPS6-201ENST00000299238 LSG1Q9H089 658 aaKnown RBP24.13■■□□□ 1.45
HPS6-201ENST00000299238 XIRP1Q702N8 1843 aaKnown RBP24.12■■□□□ 1.45
HPS6-201ENST00000299238 IFNL2Q8IZJ0 200 aa24.12■■□□□ 1.45
HPS6-201ENST00000299238 TTC41PQ6P2S7 1318 aa24.12■■□□□ 1.45
HPS6-201ENST00000299238 LRSAM1Q6UWE0 723 aa24.12■■□□□ 1.45
HPS6-201ENST00000299238 HDAC5Q9UQL6 1122 aa24.12■■□□□ 1.45
HPS6-201ENST00000299238 GRM8O00222 908 aa24.11■■□□□ 1.45
HPS6-201ENST00000299238 SPATA31A3Q5VYP0 1347 aa24.11■■□□□ 1.45
HPS6-201ENST00000299238 DTNBO60941 627 aa24.11■■□□□ 1.45
HPS6-201ENST00000299238 TAF3Q5VWG9 929 aa24.11■■□□□ 1.45
HPS6-201ENST00000299238 GDPD2Q9HCC8 539 aa24.11■■□□□ 1.45
HPS6-201ENST00000299238 PLEKHG2Q9H7P9 1386 aa24.1■■□□□ 1.45
HPS6-201ENST00000299238 UTYO14607 1347 aa24.1■■□□□ 1.45
HPS6-201ENST00000299238 NOLC1Q14978 699 aaKnown RBP eCLIP24.1■■□□□ 1.45
HPS6-201ENST00000299238 SUCLG2Q96I99 432 aa24.1■■□□□ 1.45
HPS6-201ENST00000299238 PA2G4Q9UQ80 394 aaKnown RBP24.1■■□□□ 1.45
HPS6-201ENST00000299238 SNX14Q9Y5W7 946 aa24.1■■□□□ 1.45
HPS6-201ENST00000299238 GLRX3O76003 335 aaKnown RBP24.09■■□□□ 1.45
HPS6-201ENST00000299238 CWC27Q6UX04 472 aaKnown RBP24.09■■□□□ 1.45
HPS6-201ENST00000299238 MYL6BP14649 208 aa24.09■■□□□ 1.45
HPS6-201ENST00000299238 ZNF496Q96IT1 587 aaPredicted RBP24.09■■□□□ 1.45
HPS6-201ENST00000299238 CYP27B1O15528 508 aa24.08■■□□□ 1.45
HPS6-201ENST00000299238 KCNJ4P48050 445 aa24.08■■□□□ 1.45
HPS6-201ENST00000299238 CLASRPQ8N2M8 674 aaKnown RBP24.08■■□□□ 1.45
HPS6-201ENST00000299238 KAZALD1Q96I82 304 aa24.08■■□□□ 1.45
HPS6-201ENST00000299238 CPDO75976 1380 aa24.08■■□□□ 1.45
HPS6-201ENST00000299238 TPRNQ4KMQ1 711 aa24.08■■□□□ 1.44
HPS6-201ENST00000299238 RIC3Q7Z5B4 369 aa24.08■■□□□ 1.44
HPS6-201ENST00000299238 IGKV5-2P06315 115 aa24.07■■□□□ 1.44
HPS6-201ENST00000299238 ERC1Q8IUD2 1116 aa24.07■■□□□ 1.44
HPS6-201ENST00000299238 RASEFQ8IZ41 740 aa24.07■■□□□ 1.44
HPS6-201ENST00000299238 DCAF5Q96JK2 942 aa24.07■■□□□ 1.44
HPS6-201ENST00000299238 TTC14Q96N46 770 aa24.07■■□□□ 1.44
HPS6-201ENST00000299238 BICC1Q9H694 974 aaKnown RBP24.07■■□□□ 1.44
HPS6-201ENST00000299238 TTC12Q9H892 705 aaPredicted RBP24.07■■□□□ 1.44
HPS6-201ENST00000299238 PARP4Q9UKK3 1724 aaKnown RBP24.07■■□□□ 1.44
HPS6-201ENST00000299238 PIBF1Q8WXW3 757 aa24.07■■□□□ 1.44
HPS6-201ENST00000299238 CPA1P15085 419 aa24.06■■□□□ 1.44
HPS6-201ENST00000299238 HSPA2P54652 639 aa24.06■■□□□ 1.44
HPS6-201ENST00000299238 LARP1Q6PKG0 1096 aaKnown RBP24.06■■□□□ 1.44
HPS6-201ENST00000299238 XAGE3Q8WTP9 111 aa24.06■■□□□ 1.44
HPS6-201ENST00000299238 TTC5Q8N0Z6 440 aa24.05■■□□□ 1.44
HPS6-201ENST00000299238 ECHDC1Q9NTX5 307 aa24.05■■□□□ 1.44
HPS6-201ENST00000299238 LAMB4A4D0S4 1761 aa24.05■■□□□ 1.44
HPS6-201ENST00000299238 GLI3P10071 1580 aa24.04■■□□□ 1.44
HPS6-201ENST00000299238 AFDNP55196 1824 aaKnown RBP24.04■■□□□ 1.44
HPS6-201ENST00000299238 NEURL1BA8MQ27 555 aa24.03■■□□□ 1.44
HPS6-201ENST00000299238 NEXNQ0ZGT2 675 aa24.03■■□□□ 1.44
HPS6-201ENST00000299238 COPS6Q7L5N1 327 aa24.03■■□□□ 1.44
HPS6-201ENST00000299238 MBD3O95983 291 aa24.03■■□□□ 1.44
HPS6-201ENST00000299238 SNRPA1P09661 255 aaKnown RBP24.03■■□□□ 1.44
HPS6-201ENST00000299238 GPATCH3Q96I76 525 aa24.03■■□□□ 1.44
HPS6-201ENST00000299238 ARFGEF2Q9Y6D5 1785 aa24.02■■□□□ 1.44
HPS6-201ENST00000299238 IFIT2P09913 472 aaKnown RBP24.02■■□□□ 1.44
HPS6-201ENST00000299238 GADD45BO75293 160 aaPredicted RBP24.02■■□□□ 1.44
HPS6-201ENST00000299238 USP16Q9Y5T5 823 aa24.02■■□□□ 1.44
HPS6-201ENST00000299238 RPAP1Q9BWH6 1393 aaPredicted RBP24.01■■□□□ 1.43
HPS6-201ENST00000299238 LRP10Q7Z4F1 713 aa24.01■■□□□ 1.43
HPS6-201ENST00000299238 AACSQ86V21 672 aa24.01■■□□□ 1.43
HPS6-201ENST00000299238 MYD88Q99836 296 aa24.01■■□□□ 1.43
HPS6-201ENST00000299238 METTL22Q9BUU2 404 aaPredicted RBP24.01■■□□□ 1.43
HPS6-201ENST00000299238 DIAPH3Q9NSV4 1193 aa24.01■■□□□ 1.43
HPS6-201ENST00000299238 AK2P54819 239 aa24.01■■□□□ 1.43
HPS6-201ENST00000299238 BRINP3Q76B58 766 aa24.01■■□□□ 1.43
HPS6-201ENST00000299238 DDX54Q8TDD1 881 aaKnown RBP24.01■■□□□ 1.43
HPS6-201ENST00000299238 FMNL2Q96PY5 1086 aa24.01■■□□□ 1.43
HPS6-201ENST00000299238 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms