RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 CCDC160A6NGH7 325 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 CIB2O75838 187 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 SESN3P58005 492 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 SMC1BQ8NDV3 1235 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 RILPL2Q969X0 211 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 MAML3Q96JK9 1138 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 SPATA32Q96LK8 384 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 TSNARE1Q96NA8 513 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 GBP5Q96PP8 586 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 NCAPGQ9BPX3 1015 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 HAUS8Q9BT25 410 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 SEPT10Q9P0V9 454 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 AKAP2Q9Y2D5 859 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 ANAPC15P60006 121 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 ZSCAN16Q9H4T2 348 aaPredicted RBP5.53□□□□□ -1.52
CSMD3-201ENST00000297405 LRRD1A4D1F6 860 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 ATP2A2P16615 1042 aaKnown RBP5.53□□□□□ -1.52
CSMD3-201ENST00000297405 DYNC1I2Q13409 638 aaKnown RBP5.53□□□□□ -1.52
CSMD3-201ENST00000297405 CCDC129Q6ZRS4 1044 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 TRIM4Q9C037 500 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 CHMP2AO43633 222 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 ZNF131P52739 623 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 TMED1Q13445 227 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 CPLX4Q7Z7G2 160 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 FAM210AQ96ND0 272 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 SH3GL3Q99963 347 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 SAFB2Q14151 953 aaKnown RBP eCLIP5.53□□□□□ -1.52
CSMD3-201ENST00000297405 TNIP1Q15025 636 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 NBPF3Q9H094 633 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.53□□□□□ -1.52
CSMD3-201ENST00000297405 PRRC2BQ5JSZ5 2229 aaKnown RBP5.53□□□□□ -1.52
CSMD3-201ENST00000297405 DCAF11Q8TEB1 546 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 HYPKQ9NX55 129 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 DOCK8Q8NF50 2099 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 CACNA1DQ01668 2161 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 SPECC1L-ADORA2AF8WAN1 911 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 PEX19P40855 299 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 LMBR1Q8WVP7 490 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 BICD1Q96G01 975 aa5.53□□□□□ -1.52
CSMD3-201ENST00000297405 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.53□□□□□ -1.52
CSMD3-201ENST00000297405 KRT86O43790 486 aa5.52□□□□□ -1.53
CSMD3-201ENST00000297405 NBPF10Q6P3W6 841 aaKnown RBP5.52□□□□□ -1.53
CSMD3-201ENST00000297405 MYRIPQ8NFW9 859 aa5.52□□□□□ -1.53
CSMD3-201ENST00000297405 KIF5AQ12840 1032 aa5.52□□□□□ -1.53
CSMD3-201ENST00000297405 CCHCR1Q8TD31 782 aa5.52□□□□□ -1.53
CSMD3-201ENST00000297405 CCDC97Q96F63 343 aaPredicted RBP5.52□□□□□ -1.53
CSMD3-201ENST00000297405 PPP1R12CQ9BZL4 782 aa5.52□□□□□ -1.53
CSMD3-201ENST00000297405 CTNNA3Q9UI47 895 aa5.52□□□□□ -1.53
CSMD3-201ENST00000297405 NKTRP30414 1462 aaKnown RBP5.52□□□□□ -1.53
CSMD3-201ENST00000297405 NOP14P78316 857 aaKnown RBP5.52□□□□□ -1.53
CSMD3-201ENST00000297405 HIP1RO75146 1068 aa5.52□□□□□ -1.53
CSMD3-201ENST00000297405 DMTNQ08495 405 aa5.52□□□□□ -1.53
CSMD3-201ENST00000297405 LRRC27Q9C0I9 530 aa5.52□□□□□ -1.53
CSMD3-201ENST00000297405 PFDN1O60925 122 aa5.52□□□□□ -1.53
CSMD3-201ENST00000297405 CCDC170Q8IYT3 715 aa5.52□□□□□ -1.53
CSMD3-201ENST00000297405 GNAI1P63096 354 aa5.52□□□□□ -1.53
CSMD3-201ENST00000297405 LMNB2Q03252 620 aa5.52□□□□□ -1.53
CSMD3-201ENST00000297405 HNRNPMP52272 730 aaKnown RBP eCLIP5.52□□□□□ -1.53
CSMD3-201ENST00000297405 KRT83P78385 493 aa5.52□□□□□ -1.53
CSMD3-201ENST00000297405 FSD1Q9BTV5 496 aa5.52□□□□□ -1.53
CSMD3-201ENST00000297405 NEBLO76041 1014 aa5.52□□□□□ -1.53
CSMD3-201ENST00000297405 IMPACTQ9P2X3 320 aa5.52□□□□□ -1.53
CSMD3-201ENST00000297405 PRR16Q569H4 304 aa5.52□□□□□ -1.53
CSMD3-201ENST00000297405 RSPH3Q86UC2 560 aa5.52□□□□□ -1.53
CSMD3-201ENST00000297405 RASEFQ8IZ41 740 aa5.52□□□□□ -1.53
CSMD3-201ENST00000297405 CENPKQ9BS16 269 aa5.52□□□□□ -1.53
CSMD3-201ENST00000297405 C9orf78Q9NZ63 289 aaPredicted RBP5.52□□□□□ -1.53
CSMD3-201ENST00000297405 CCDC141Q6ZP82 1450 aa5.52□□□□□ -1.53
CSMD3-201ENST00000297405 SOGA1O94964 1423 aa5.51□□□□□ -1.53
CSMD3-201ENST00000297405 AFAP1L2Q8N4X5 818 aa5.51□□□□□ -1.53
CSMD3-201ENST00000297405 CHIC2Q9UKJ5 165 aa5.51□□□□□ -1.53
CSMD3-201ENST00000297405 CCDC62Q6P9F0 684 aa5.51□□□□□ -1.53
CSMD3-201ENST00000297405 USP37Q86T82 979 aa5.51□□□□□ -1.53
CSMD3-201ENST00000297405 CTAGE15A4D2H0 777 aa5.51□□□□□ -1.53
CSMD3-201ENST00000297405 CTAGE8P0CG41 777 aa5.51□□□□□ -1.53
CSMD3-201ENST00000297405 CTAGE4Q8IX94 777 aa5.51□□□□□ -1.53
CSMD3-201ENST00000297405 CETN3O15182 167 aa5.51□□□□□ -1.53
CSMD3-201ENST00000297405 EIF2S2P20042 333 aaKnown RBP5.51□□□□□ -1.53
CSMD3-201ENST00000297405 LMNB1P20700 586 aa5.51□□□□□ -1.53
CSMD3-201ENST00000297405 SCLT1Q96NL6 688 aa5.51□□□□□ -1.53
CSMD3-201ENST00000297405 RRP7BPQ9NSQ0 103 aa5.51□□□□□ -1.53
CSMD3-201ENST00000297405 RSPH14Q9UHP6 348 aa5.51□□□□□ -1.53
CSMD3-201ENST00000297405 MAN1A2O60476 641 aa5.51□□□□□ -1.53
CSMD3-201ENST00000297405 NEK4P51957 841 aa5.51□□□□□ -1.53
CSMD3-201ENST00000297405 APBA1Q02410 837 aa5.51□□□□□ -1.53
CSMD3-201ENST00000297405 KIAA0753Q2KHM9 967 aa5.51□□□□□ -1.53
CSMD3-201ENST00000297405 DAPK1P53355 1430 aa5.51□□□□□ -1.53
CSMD3-201ENST00000297405 CYLC1P35663 651 aaPredicted RBP5.51□□□□□ -1.53
CSMD3-201ENST00000297405 RNASELQ05823 741 aaKnown RBP5.51□□□□□ -1.53
CSMD3-201ENST00000297405 G3BP1Q13283 466 aaKnown RBP eCLIP5.51□□□□□ -1.53
CSMD3-201ENST00000297405 AMOTQ4VCS5 1084 aa5.51□□□□□ -1.53
CSMD3-201ENST00000297405 GPR161Q8N6U8 529 aaKnown RBP5.51□□□□□ -1.53
CSMD3-201ENST00000297405 AFAP1L1Q8TED9 768 aa5.51□□□□□ -1.53
CSMD3-201ENST00000297405 HOMER2Q9NSB8 354 aa5.51□□□□□ -1.53
CSMD3-201ENST00000297405 MTRF1LQ9UGC7 380 aaKnown RBP5.51□□□□□ -1.53
CSMD3-201ENST00000297405 IBTKQ9P2D0 1353 aaPredicted RBP5.51□□□□□ -1.53
CSMD3-201ENST00000297405 ZBTB16Q05516 673 aa5.51□□□□□ -1.53
CSMD3-201ENST00000297405 NOLC1Q14978 699 aaKnown RBP eCLIP5.51□□□□□ -1.53
CSMD3-201ENST00000297405 FYB2Q5VWT5 728 aa5.51□□□□□ -1.53
CSMD3-201ENST00000297405 ZSCAN25Q6NSZ9 544 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 375.2 ms