RNA–Protein interactions for RNA: ENST00000296142.3

RTP3-201, Transcript of receptor transporter protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTP3, Length 1,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3-201ENST00000296142 ZNF652Q9Y2D9 606 aa11.16□□□□□ -0.62
RTP3-201ENST00000296142 TRAF5O00463 557 aa11.15□□□□□ -0.62
RTP3-201ENST00000296142 EPS15P42566 896 aa11.15□□□□□ -0.62
RTP3-201ENST00000296142 DEFB115Q30KQ5 88 aa11.15□□□□□ -0.62
RTP3-201ENST00000296142 WBP1LQ9NX94 342 aa11.15□□□□□ -0.62
RTP3-201ENST00000296142 RRP7AQ9Y3A4 280 aaKnown RBP11.15□□□□□ -0.62
RTP3-201ENST00000296142 LAMB4A4D0S4 1761 aa11.15□□□□□ -0.62
RTP3-201ENST00000296142 HSPA8P11142 646 aaKnown RBP11.14□□□□□ -0.63
RTP3-201ENST00000296142 MYL6BP14649 208 aa11.14□□□□□ -0.63
RTP3-201ENST00000296142 CLEC4GQ6UXB4 293 aa11.14□□□□□ -0.63
RTP3-201ENST00000296142 TTLL7Q6ZT98 887 aa11.14□□□□□ -0.63
RTP3-201ENST00000296142 RTKN2Q8IZC4 609 aa11.14□□□□□ -0.63
RTP3-201ENST00000296142 THUMPD2Q9BTF0 503 aaKnown RBP11.14□□□□□ -0.63
RTP3-201ENST00000296142 PRKRIP1Q9H875 184 aaPredicted RBP11.14□□□□□ -0.63
RTP3-201ENST00000296142 PRDM10Q9NQV6 1147 aa11.14□□□□□ -0.63
RTP3-201ENST00000296142 WDR33Q9C0J8 1336 aaKnown RBP11.14□□□□□ -0.63
RTP3-201ENST00000296142 KLRG2A4D1S0 409 aaPredicted RBP11.13□□□□□ -0.63
RTP3-201ENST00000296142 FZD9O00144 591 aa11.13□□□□□ -0.63
RTP3-201ENST00000296142 FAM161AQ3B820 660 aa11.13□□□□□ -0.63
RTP3-201ENST00000296142 CYP4F22Q6NT55 531 aa11.13□□□□□ -0.63
RTP3-201ENST00000296142 C3orf67Q6ZVT6 689 aa11.13□□□□□ -0.63
RTP3-201ENST00000296142 ZBTB3Q9H5J0 574 aa11.13□□□□□ -0.63
RTP3-201ENST00000296142 LAMB2P55268 1798 aa11.13□□□□□ -0.63
RTP3-201ENST00000296142 LARGE2Q8N3Y3 721 aa11.12□□□□□ -0.63
RTP3-201ENST00000296142 JDP2Q8WYK2 163 aa11.12□□□□□ -0.63
RTP3-201ENST00000296142 RPGRQ92834 1020 aaKnown RBP11.12□□□□□ -0.63
RTP3-201ENST00000296142 ABHD8Q96I13 439 aa11.12□□□□□ -0.63
RTP3-201ENST00000296142 CFAP53Q96M91 514 aa11.12□□□□□ -0.63
RTP3-201ENST00000296142 KDM3BQ7LBC6 1761 aa11.12□□□□□ -0.63
RTP3-201ENST00000296142 RASSF10A6NK89 507 aa11.11□□□□□ -0.63
RTP3-201ENST00000296142 AOC2O75106 756 aa11.11□□□□□ -0.63
RTP3-201ENST00000296142 ALDH1B1P30837 517 aa11.11□□□□□ -0.63
RTP3-201ENST00000296142 EIF6P56537 245 aaKnown RBP11.11□□□□□ -0.63
RTP3-201ENST00000296142 RALBP1Q15311 655 aa11.11□□□□□ -0.63
RTP3-201ENST00000296142 TAF7Q15545 349 aaPredicted RBP11.11□□□□□ -0.63
RTP3-201ENST00000296142 SUSD4Q5VX71 490 aa11.11□□□□□ -0.63
RTP3-201ENST00000296142 PNMA8AQ86V59 439 aaPredicted RBP11.11□□□□□ -0.63
RTP3-201ENST00000296142 GPC2Q8N158 579 aa11.11□□□□□ -0.63
RTP3-201ENST00000296142 CAPNS2Q96L46 248 aa11.11□□□□□ -0.63
RTP3-201ENST00000296142 MRS2Q9HD23 443 aa11.11□□□□□ -0.63
RTP3-201ENST00000296142 DDX21Q9NR30 783 aaKnown RBP eCLIP11.11□□□□□ -0.63
RTP3-201ENST00000296142 UBN2Q6ZU65 1347 aa11.11□□□□□ -0.63
RTP3-201ENST00000296142 PDE4DIPQ5VU43 2346 aa11.11□□□□□ -0.63
RTP3-201ENST00000296142 SNED1Q8TER0 1413 aa11.11□□□□□ -0.63
RTP3-201ENST00000296142 CCDC85CA6NKD9 419 aa11.1□□□□□ -0.63
RTP3-201ENST00000296142 ANXA1P04083 346 aa11.1□□□□□ -0.63
RTP3-201ENST00000296142 LMOD1P29536 600 aaPredicted RBP11.1□□□□□ -0.63
RTP3-201ENST00000296142 PPP2R1AP30153 589 aa11.1□□□□□ -0.63
RTP3-201ENST00000296142 SCNN1DP51172 638 aa11.1□□□□□ -0.63
RTP3-201ENST00000296142 AOC3Q16853 763 aa11.1□□□□□ -0.63
RTP3-201ENST00000296142 CST9Q5W186 159 aa11.1□□□□□ -0.63
RTP3-201ENST00000296142 NUDCQ9Y266 331 aa11.1□□□□□ -0.63
RTP3-201ENST00000296142 DLK2Q6UY11 383 aa11.09□□□□□ -0.63
RTP3-201ENST00000296142 CFAP44Q96MT7 982 aa11.09□□□□□ -0.63
RTP3-201ENST00000296142 SHTN1A0MZ66 631 aa11.09□□□□□ -0.63
RTP3-201ENST00000296142 PPEF1O14829 653 aaPredicted RBP11.09□□□□□ -0.63
RTP3-201ENST00000296142 PPIP5K2O43314 1243 aa11.09□□□□□ -0.63
RTP3-201ENST00000296142 HNRNPUQ00839 825 aaKnown RBP eCLIP11.09□□□□□ -0.63
RTP3-201ENST00000296142 CRY2Q49AN0 593 aa11.09□□□□□ -0.63
RTP3-201ENST00000296142 NECTIN2Q92692 538 aa11.09□□□□□ -0.63
RTP3-201ENST00000296142 GPR101Q96P66 508 aaPredicted RBP11.09□□□□□ -0.63
RTP3-201ENST00000296142 PSMD1Q99460 953 aa11.09□□□□□ -0.63
RTP3-201ENST00000296142 ZNF408Q9H9D4 720 aa11.09□□□□□ -0.63
RTP3-201ENST00000296142 MAP3K15Q6ZN16 1313 aa11.08□□□□□ -0.64
RTP3-201ENST00000296142 NPC1L1Q9UHC9 1359 aa11.08□□□□□ -0.64
RTP3-201ENST00000296142 SLC34A2O95436 690 aa11.08□□□□□ -0.64
RTP3-201ENST00000296142 MAP2K1Q02750 393 aaPredicted RBP11.08□□□□□ -0.64
RTP3-201ENST00000296142 KIF6Q6ZMV9 814 aa11.08□□□□□ -0.64
RTP3-201ENST00000296142 NIM1KQ8IY84 436 aa11.08□□□□□ -0.64
RTP3-201ENST00000296142 GLIS2Q9BZE0 524 aaPredicted RBP11.08□□□□□ -0.64
RTP3-201ENST00000296142 NYXQ9GZU5 481 aa11.08□□□□□ -0.64
RTP3-201ENST00000296142 NTSR2O95665 410 aa11.07□□□□□ -0.64
RTP3-201ENST00000296142 EIF2S2P20042 333 aaKnown RBP11.07□□□□□ -0.64
RTP3-201ENST00000296142 EIF4A1P60842 406 aaKnown RBP11.07□□□□□ -0.64
RTP3-201ENST00000296142 RBM17Q96I25 401 aaKnown RBP11.07□□□□□ -0.64
RTP3-201ENST00000296142 ZIC5Q96T25 663 aa11.07□□□□□ -0.64
RTP3-201ENST00000296142 RAD17O75943 681 aa11.06□□□□□ -0.64
RTP3-201ENST00000296142 CELF2O95319 508 aaKnown RBP11.06□□□□□ -0.64
RTP3-201ENST00000296142 HCLS1P14317 486 aaPredicted RBP11.06□□□□□ -0.64
RTP3-201ENST00000296142 GMPSP49915 693 aaPredicted RBP11.06□□□□□ -0.64
RTP3-201ENST00000296142 CXCL9Q07325 125 aa11.06□□□□□ -0.64
RTP3-201ENST00000296142 PROSER3Q2NL68 480 aa11.06□□□□□ -0.64
RTP3-201ENST00000296142 BEGAINQ9BUH8 593 aa11.06□□□□□ -0.64
RTP3-201ENST00000296142 THSD7BQ9C0I4 1608 aa11.05□□□□□ -0.64
RTP3-201ENST00000296142 ANKRD36CQ5JPF3 1778 aa11.05□□□□□ -0.64
RTP3-201ENST00000296142 ERVV-1B6SEH8 477 aa11.05□□□□□ -0.64
RTP3-201ENST00000296142 HOXA10P31260 410 aaPredicted RBP11.05□□□□□ -0.64
RTP3-201ENST00000296142 AIMP1Q12904 312 aaKnown RBP11.05□□□□□ -0.64
RTP3-201ENST00000296142 ZNF34Q8IZ26 560 aa11.05□□□□□ -0.64
RTP3-201ENST00000296142 GPRC5DQ9NZD1 345 aa11.05□□□□□ -0.64
RTP3-201ENST00000296142 TLL2Q9Y6L7 1015 aa11.05□□□□□ -0.64
RTP3-201ENST00000296142 MYBBP1AQ9BQG0 1328 aaKnown RBP11.05□□□□□ -0.64
RTP3-201ENST00000296142 AKAP11Q9UKA4 1901 aa11.04□□□□□ -0.64
RTP3-201ENST00000296142 ABCC4O15439 1325 aa11.04□□□□□ -0.64
RTP3-201ENST00000296142 HTATSF1O43719 755 aaKnown RBP11.04□□□□□ -0.64
RTP3-201ENST00000296142 ECE1P42892 770 aa11.04□□□□□ -0.64
RTP3-201ENST00000296142 HIRAP54198 1017 aaPredicted RBP11.04□□□□□ -0.64
RTP3-201ENST00000296142 GIGYF2Q6Y7W6 1299 aaKnown RBP11.04□□□□□ -0.64
RTP3-201ENST00000296142 USP50Q70EL3 339 aaPredicted RBP11.04□□□□□ -0.64
RTP3-201ENST00000296142 FAM9BQ8IZU0 186 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms