RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 SURF6O75683 361 aaKnown RBP11.35□□□□□ -0.59
CLRN1-201ENST00000295911 ANXA1P04083 346 aa11.35□□□□□ -0.59
CLRN1-201ENST00000295911 NBPF7P0C2Y1 421 aaPredicted RBP11.35□□□□□ -0.59
CLRN1-201ENST00000295911 DEKP35659 375 aaKnown RBP11.35□□□□□ -0.59
CLRN1-201ENST00000295911 EMP3P54852 163 aa11.35□□□□□ -0.59
CLRN1-201ENST00000295911 CABP4P57796 275 aa11.35□□□□□ -0.59
CLRN1-201ENST00000295911 NEXNQ0ZGT2 675 aa11.35□□□□□ -0.59
CLRN1-201ENST00000295911 RABEP1Q15276 862 aa11.35□□□□□ -0.59
CLRN1-201ENST00000295911 HS6ST3Q8IZP7 471 aa11.35□□□□□ -0.59
CLRN1-201ENST00000295911 USP26Q9BXU7 913 aa11.35□□□□□ -0.59
CLRN1-201ENST00000295911 CHMP5Q9NZZ3 219 aa11.35□□□□□ -0.59
CLRN1-201ENST00000295911 UBR2Q8IWV8 1755 aa11.34□□□□□ -0.59
CLRN1-201ENST00000295911 ERVV-2B6SEH9 535 aa11.34□□□□□ -0.59
CLRN1-201ENST00000295911 SLC39A6Q13433 755 aa11.34□□□□□ -0.59
CLRN1-201ENST00000295911 PDIA6Q15084 440 aa11.34□□□□□ -0.59
CLRN1-201ENST00000295911 PROSER3Q2NL68 480 aa11.34□□□□□ -0.59
CLRN1-201ENST00000295911 TOM1L2Q6ZVM7 507 aa11.34□□□□□ -0.59
CLRN1-201ENST00000295911 ERC1Q8IUD2 1116 aa11.34□□□□□ -0.59
CLRN1-201ENST00000295911 IL27Q8NEV9 243 aa11.34□□□□□ -0.59
CLRN1-201ENST00000295911 ZCRB1Q8TBF4 217 aaKnown RBP11.34□□□□□ -0.59
CLRN1-201ENST00000295911 KIF2CQ99661 725 aa11.34□□□□□ -0.59
CLRN1-201ENST00000295911 CARD10Q9BWT7 1032 aa11.34□□□□□ -0.59
CLRN1-201ENST00000295911 BCL11AQ9H165 835 aa11.34□□□□□ -0.59
CLRN1-201ENST00000295911 SLKQ9H2G2 1235 aaPredicted RBP11.34□□□□□ -0.59
CLRN1-201ENST00000295911 ARFGEF2Q9Y6D5 1785 aa11.33□□□□□ -0.6
CLRN1-201ENST00000295911 ERBB4Q15303 1308 aa11.33□□□□□ -0.6
CLRN1-201ENST00000295911 SHANK3Q9BYB0 1731 aa11.33□□□□□ -0.6
CLRN1-201ENST00000295911 POTEB3A0JP26 581 aa11.33□□□□□ -0.6
CLRN1-201ENST00000295911 GRM8O00222 908 aa11.33□□□□□ -0.6
CLRN1-201ENST00000295911 POTEBQ6S5H4 581 aa11.33□□□□□ -0.6
CLRN1-201ENST00000295911 RIC3Q7Z5B4 369 aa11.33□□□□□ -0.6
CLRN1-201ENST00000295911 RHPN1Q8TCX5 695 aa11.33□□□□□ -0.6
CLRN1-201ENST00000295911 ZNF496Q96IT1 587 aaPredicted RBP11.33□□□□□ -0.6
CLRN1-201ENST00000295911 PAPPAQ13219 1627 aa11.32□□□□□ -0.6
CLRN1-201ENST00000295911 PRAMEF22A3QJZ6 481 aa11.32□□□□□ -0.6
CLRN1-201ENST00000295911 EPB41L2O43491 1005 aaKnown RBP11.32□□□□□ -0.6
CLRN1-201ENST00000295911 IL2RBP14784 551 aa11.32□□□□□ -0.6
CLRN1-201ENST00000295911 EVA1CP58658 441 aa11.32□□□□□ -0.6
CLRN1-201ENST00000295911 NKX1-1Q15270 411 aaPredicted RBP11.32□□□□□ -0.6
CLRN1-201ENST00000295911 K7ELQ4 463 aaPredicted RBP11.31□□□□□ -0.6
CLRN1-201ENST00000295911 FRAT2O75474 233 aaPredicted RBP11.31□□□□□ -0.6
CLRN1-201ENST00000295911 AIMP1Q12904 312 aaKnown RBP11.31□□□□□ -0.6
CLRN1-201ENST00000295911 DOK7Q18PE1 504 aa11.31□□□□□ -0.6
CLRN1-201ENST00000295911 METTL22Q9BUU2 404 aaPredicted RBP11.31□□□□□ -0.6
CLRN1-201ENST00000295911 TTC41PQ6P2S7 1318 aa11.3□□□□□ -0.6
CLRN1-201ENST00000295911 USP42Q9H9J4 1324 aaKnown RBP11.3□□□□□ -0.6
CLRN1-201ENST00000295911 TRIM6-TRIM34B2RNG4 842 aa11.3□□□□□ -0.6
CLRN1-201ENST00000295911 MCCP23508 829 aa11.3□□□□□ -0.6
CLRN1-201ENST00000295911 OS9Q13438 667 aaPredicted RBP11.3□□□□□ -0.6
CLRN1-201ENST00000295911 ANKRD13DQ6ZTN6 518 aa11.3□□□□□ -0.6
CLRN1-201ENST00000295911 COPS6Q7L5N1 327 aa11.3□□□□□ -0.6
CLRN1-201ENST00000295911 ZNF710Q8N1W2 664 aa11.3□□□□□ -0.6
CLRN1-201ENST00000295911 XAGE3Q8WTP9 111 aa11.3□□□□□ -0.6
CLRN1-201ENST00000295911 GPATCH3Q96I76 525 aa11.3□□□□□ -0.6
CLRN1-201ENST00000295911 COL14A1Q05707 1796 aaKnown RBP11.3□□□□□ -0.6
CLRN1-201ENST00000295911 FAM205CA6NFA0 338 aa11.29□□□□□ -0.6
CLRN1-201ENST00000295911 MYL6BP14649 208 aa11.29□□□□□ -0.6
CLRN1-201ENST00000295911 CWF19L2Q2TBE0 894 aaKnown RBP11.29□□□□□ -0.6
CLRN1-201ENST00000295911 CLASRPQ8N2M8 674 aaKnown RBP11.29□□□□□ -0.6
CLRN1-201ENST00000295911 RILPL2Q969X0 211 aa11.29□□□□□ -0.6
CLRN1-201ENST00000295911 ESYT1Q9BSJ8 1104 aa11.29□□□□□ -0.6
CLRN1-201ENST00000295911 GLI3P10071 1580 aa11.28□□□□□ -0.6
CLRN1-201ENST00000295911 COL15A1P39059 1388 aa11.28□□□□□ -0.6
CLRN1-201ENST00000295911 NEURL1BA8MQ27 555 aa11.28□□□□□ -0.6
CLRN1-201ENST00000295911 HSP90AA1P07900 732 aaKnown RBP11.28□□□□□ -0.6
CLRN1-201ENST00000295911 CHMLP26374 656 aa11.28□□□□□ -0.6
CLRN1-201ENST00000295911 GCKRQ14397 625 aa11.28□□□□□ -0.6
CLRN1-201ENST00000295911 HS3ST6Q96QI5 342 aa11.28□□□□□ -0.6
CLRN1-201ENST00000295911 IL1RAPL2Q9NP60 686 aa11.28□□□□□ -0.6
CLRN1-201ENST00000295911 USP16Q9Y5T5 823 aa11.28□□□□□ -0.6
CLRN1-201ENST00000295911 ITGB4P16144 1822 aa11.28□□□□□ -0.6
CLRN1-201ENST00000295911 NUP188Q5SRE5 1749 aa11.28□□□□□ -0.6
CLRN1-201ENST00000295911 COL22A1Q8NFW1 1626 aaPredicted RBP11.27□□□□□ -0.6
CLRN1-201ENST00000295911 GLRX3O76003 335 aaKnown RBP11.27□□□□□ -0.6
CLRN1-201ENST00000295911 IGKV5-2P06315 115 aa11.27□□□□□ -0.6
CLRN1-201ENST00000295911 HOXB1P14653 301 aaPredicted RBP11.27□□□□□ -0.6
CLRN1-201ENST00000295911 DDIT3P35638 169 aa11.27□□□□□ -0.6
CLRN1-201ENST00000295911 ANAPC15P60006 121 aa11.27□□□□□ -0.6
CLRN1-201ENST00000295911 G3BP1Q13283 466 aaKnown RBP eCLIP11.27□□□□□ -0.6
CLRN1-201ENST00000295911 LRP10Q7Z4F1 713 aa11.27□□□□□ -0.6
CLRN1-201ENST00000295911 NUTM1Q86Y26 1132 aa11.27□□□□□ -0.6
CLRN1-201ENST00000295911 CNTROBQ8N137 903 aa11.27□□□□□ -0.6
CLRN1-201ENST00000295911 PLBD2Q8NHP8 589 aa11.27□□□□□ -0.6
CLRN1-201ENST00000295911 PPP1R37O75864 691 aa11.26□□□□□ -0.61
CLRN1-201ENST00000295911 IFIT2P09913 472 aaKnown RBP11.26□□□□□ -0.61
CLRN1-201ENST00000295911 PI4K2BQ8TCG2 481 aa11.26□□□□□ -0.61
CLRN1-201ENST00000295911 SUCLG2Q96I99 432 aa11.26□□□□□ -0.61
CLRN1-201ENST00000295911 MYD88Q99836 296 aa11.26□□□□□ -0.61
CLRN1-201ENST00000295911 BICC1Q9H694 974 aaKnown RBP11.26□□□□□ -0.61
CLRN1-201ENST00000295911 STRN4Q9NRL3 753 aa11.26□□□□□ -0.61
CLRN1-201ENST00000295911 KCPQ6ZWJ8 1503 aa11.26□□□□□ -0.61
CLRN1-201ENST00000295911 MCM2P49736 904 aa11.26□□□□□ -0.61
CLRN1-201ENST00000295911 TSHZ3Q63HK5 1081 aa11.26□□□□□ -0.61
CLRN1-201ENST00000295911 TEX13AQ9BXU3 409 aaPredicted RBP11.26□□□□□ -0.61
CLRN1-201ENST00000295911 ECHDC1Q9NTX5 307 aa11.26□□□□□ -0.61
CLRN1-201ENST00000295911 AHDC1Q5TGY3 1603 aaPredicted RBP11.25□□□□□ -0.61
CLRN1-201ENST00000295911 PLCH1Q4KWH8 1693 aa11.25□□□□□ -0.61
CLRN1-201ENST00000295911 ROBO1Q9Y6N7 1651 aa11.25□□□□□ -0.61
CLRN1-201ENST00000295911 TOGARAM1Q9Y4F4 1720 aa11.25□□□□□ -0.61
CLRN1-201ENST00000295911 PTMSP20962 102 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms