RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 ZSCAN22P10073 491 aaPredicted RBP14.8□□□□□ -0.04
PTCD1-201ENST00000292478 EIF4A2Q14240 407 aaKnown RBP14.8□□□□□ -0.04
PTCD1-201ENST00000292478 ZRSR2Q15696 482 aaKnown RBP14.8□□□□□ -0.04
PTCD1-201ENST00000292478 VPS36Q86VN1 386 aa14.8□□□□□ -0.04
PTCD1-201ENST00000292478 TMX3Q96JJ7 454 aa14.8□□□□□ -0.04
PTCD1-201ENST00000292478 TSPYL1Q9H0U9 437 aa14.8□□□□□ -0.04
PTCD1-201ENST00000292478 ABCC1P33527 1531 aa14.8□□□□□ -0.04
PTCD1-201ENST00000292478 DNMT1P26358 1616 aaKnown RBP14.8□□□□□ -0.04
PTCD1-201ENST00000292478 DCAF8L1A6NGE4 600 aa14.8□□□□□ -0.04
PTCD1-201ENST00000292478 KIAA0754O94854 1291 aa14.8□□□□□ -0.04
PTCD1-201ENST00000292478 MFSD6Q6ZSS7 791 aa14.8□□□□□ -0.04
PTCD1-201ENST00000292478 CUL5Q93034 780 aa14.8□□□□□ -0.04
PTCD1-201ENST00000292478 GOLGA6L9A6NEM1 432 aa14.8□□□□□ -0.04
PTCD1-201ENST00000292478 TMTC2Q8N394 836 aa14.8□□□□□ -0.04
PTCD1-201ENST00000292478 ORC3Q9UBD5 711 aaPredicted RBP14.8□□□□□ -0.04
PTCD1-201ENST00000292478 METAP2P50579 478 aaKnown RBP eCLIP14.8□□□□□ -0.04
PTCD1-201ENST00000292478 CCT2P78371 535 aaKnown RBP14.8□□□□□ -0.04
PTCD1-201ENST00000292478 TMCO3Q6UWJ1 677 aa14.8□□□□□ -0.04
PTCD1-201ENST00000292478 CHPF2Q9P2E5 772 aa14.8□□□□□ -0.04
PTCD1-201ENST00000292478 BMP15O95972 392 aa14.79□□□□□ -0.04
PTCD1-201ENST00000292478 GRM8O00222 908 aa14.79□□□□□ -0.04
PTCD1-201ENST00000292478 CASQ1P31415 396 aa14.79□□□□□ -0.04
PTCD1-201ENST00000292478 CETN2P41208 172 aa14.79□□□□□ -0.04
PTCD1-201ENST00000292478 GUCY1B3Q02153 619 aa14.79□□□□□ -0.04
PTCD1-201ENST00000292478 MAP9Q49MG5 647 aa14.79□□□□□ -0.04
PTCD1-201ENST00000292478 KRT23Q9C075 422 aa14.79□□□□□ -0.04
PTCD1-201ENST00000292478 SEPT11Q9NVA2 429 aaKnown RBP14.79□□□□□ -0.04
PTCD1-201ENST00000292478 TRPM2O94759 1503 aa14.79□□□□□ -0.04
PTCD1-201ENST00000292478 NPHP3Q7Z494 1330 aa14.79□□□□□ -0.04
PTCD1-201ENST00000292478 IL15P40933 162 aaPredicted RBP14.79□□□□□ -0.04
PTCD1-201ENST00000292478 LRRC27Q9C0I9 530 aa14.79□□□□□ -0.04
PTCD1-201ENST00000292478 YEATS4O95619 227 aa14.79□□□□□ -0.04
PTCD1-201ENST00000292478 SEPT7Q16181 437 aaKnown RBP14.79□□□□□ -0.04
PTCD1-201ENST00000292478 CCDC152Q4G0S7 254 aa14.79□□□□□ -0.04
PTCD1-201ENST00000292478 C8orf58Q8NAV2 365 aa14.79□□□□□ -0.04
PTCD1-201ENST00000292478 MSH6P52701 1360 aa14.79□□□□□ -0.04
PTCD1-201ENST00000292478 COL17A1Q9UMD9 1497 aaPredicted RBP14.79□□□□□ -0.04
PTCD1-201ENST00000292478 ATP5J2-PTCD1G3V325 749 aa14.78□□□□□ -0.04
PTCD1-201ENST00000292478 GSTO1P78417 241 aa14.78□□□□□ -0.04
PTCD1-201ENST00000292478 DCTPP1Q9H773 170 aa14.78□□□□□ -0.04
PTCD1-201ENST00000292478 CNNM2Q9H8M5 875 aa14.78□□□□□ -0.04
PTCD1-201ENST00000292478 INSRP06213 1382 aa14.78□□□□□ -0.04
PTCD1-201ENST00000292478 GPTP24298 496 aa14.78□□□□□ -0.04
PTCD1-201ENST00000292478 DNAI2Q9GZS0 605 aa14.78□□□□□ -0.04
PTCD1-201ENST00000292478 GOLGA6L7A0A1B0GV03 622 aa14.78□□□□□ -0.04
PTCD1-201ENST00000292478 ZCRB1Q8TBF4 217 aaKnown RBP14.78□□□□□ -0.04
PTCD1-201ENST00000292478 USO1O60763 962 aaKnown RBP14.78□□□□□ -0.04
PTCD1-201ENST00000292478 SKIDA1Q1XH10 827 aa14.78□□□□□ -0.04
PTCD1-201ENST00000292478 DDX46Q7L014 1031 aaKnown RBP14.77□□□□□ -0.04
PTCD1-201ENST00000292478 CACNA2D4Q7Z3S7 1137 aa14.77□□□□□ -0.04
PTCD1-201ENST00000292478 FAM114A1Q8IWE2 563 aa14.77□□□□□ -0.04
PTCD1-201ENST00000292478 TCP11L1Q9NUJ3 509 aa14.77□□□□□ -0.04
PTCD1-201ENST00000292478 USP25Q9UHP3 1055 aa14.77□□□□□ -0.04
PTCD1-201ENST00000292478 ADGRL2O95490 1459 aa14.77□□□□□ -0.04
PTCD1-201ENST00000292478 CKAP2LQ8IYA6 745 aa14.77□□□□□ -0.04
PTCD1-201ENST00000292478 BABAM1Q9NWV8 329 aa14.77□□□□□ -0.04
PTCD1-201ENST00000292478 VAMP4O75379 141 aa14.77□□□□□ -0.05
PTCD1-201ENST00000292478 NEFHP12036 1026 aa14.77□□□□□ -0.05
PTCD1-201ENST00000292478 MCMDC2Q4G0Z9 681 aa14.77□□□□□ -0.05
PTCD1-201ENST00000292478 CCDC102BQ68D86 513 aa14.77□□□□□ -0.05
PTCD1-201ENST00000292478 KLHL10Q6JEL2 608 aa14.77□□□□□ -0.05
PTCD1-201ENST00000292478 LRSAM1Q6UWE0 723 aa14.77□□□□□ -0.05
PTCD1-201ENST00000292478 CALML4Q96GE6 196 aa14.77□□□□□ -0.05
PTCD1-201ENST00000292478 LINS1Q8NG48 757 aa14.77□□□□□ -0.05
PTCD1-201ENST00000292478 POTEB2H3BUK9 544 aa14.76□□□□□ -0.05
PTCD1-201ENST00000292478 TRIM21P19474 475 aaKnown RBP14.76□□□□□ -0.05
PTCD1-201ENST00000292478 CCDC96Q2M329 555 aa14.76□□□□□ -0.05
PTCD1-201ENST00000292478 PPP4R3BQ5MIZ7 849 aa14.76□□□□□ -0.05
PTCD1-201ENST00000292478 XAGE3Q8WTP9 111 aa14.76□□□□□ -0.05
PTCD1-201ENST00000292478 KAT14Q9H8E8 782 aa14.76□□□□□ -0.05
PTCD1-201ENST00000292478 CRNKL1Q9BZJ0 848 aaKnown RBP14.76□□□□□ -0.05
PTCD1-201ENST00000292478 CCDC150Q8NCX0 1101 aa14.76□□□□□ -0.05
PTCD1-201ENST00000292478 MAP3K5Q99683 1374 aa14.76□□□□□ -0.05
PTCD1-201ENST00000292478 CGNQ9P2M7 1197 aaKnown RBP14.76□□□□□ -0.05
PTCD1-201ENST00000292478 ZNF165P49910 485 aa14.76□□□□□ -0.05
PTCD1-201ENST00000292478 KCNG4Q8TDN1 519 aa14.76□□□□□ -0.05
PTCD1-201ENST00000292478 PPP1R1BQ9UD71 204 aaPredicted RBP14.76□□□□□ -0.05
PTCD1-201ENST00000292478 ZGPATQ8N5A5 531 aaKnown RBP14.75□□□□□ -0.05
PTCD1-201ENST00000292478 CRACR2AQ9BSW2 395 aa14.75□□□□□ -0.05
PTCD1-201ENST00000292478 TFIP11Q9UBB9 837 aaKnown RBP14.75□□□□□ -0.05
PTCD1-201ENST00000292478 ADCY5O95622 1261 aa14.75□□□□□ -0.05
PTCD1-201ENST00000292478 SMC5Q8IY18 1101 aa14.75□□□□□ -0.05
PTCD1-201ENST00000292478 RBM8AQ9Y5S9 174 aaKnown RBP14.75□□□□□ -0.05
PTCD1-201ENST00000292478 RBM25P49756 843 aaKnown RBP14.75□□□□□ -0.05
PTCD1-201ENST00000292478 KIF4BQ2VIQ3 1234 aa14.75□□□□□ -0.05
PTCD1-201ENST00000292478 ZSCAN23Q3MJ62 389 aa14.75□□□□□ -0.05
PTCD1-201ENST00000292478 C8orf34Q49A92 452 aa14.75□□□□□ -0.05
PTCD1-201ENST00000292478 COPS6Q7L5N1 327 aa14.75□□□□□ -0.05
PTCD1-201ENST00000292478 MTHFSDQ2M296 383 aaKnown RBP14.75□□□□□ -0.05
PTCD1-201ENST00000292478 PPP4R3AQ6IN85 833 aa14.75□□□□□ -0.05
PTCD1-201ENST00000292478 CCDC102AQ96A19 550 aa14.75□□□□□ -0.05
PTCD1-201ENST00000292478 RMND1Q9NWS8 449 aa14.75□□□□□ -0.05
PTCD1-201ENST00000292478 PZPP20742 1482 aa14.75□□□□□ -0.05
PTCD1-201ENST00000292478 RAD50Q92878 1312 aa14.74□□□□□ -0.05
PTCD1-201ENST00000292478 ZBTB40Q9NUA8 1239 aa14.74□□□□□ -0.05
PTCD1-201ENST00000292478 TNNT1P13805 278 aa14.74□□□□□ -0.05
PTCD1-201ENST00000292478 MATR3P43243 847 aaKnown RBP eCLIP14.74□□□□□ -0.05
PTCD1-201ENST00000292478 TSPY2A6NKD2 308 aa14.74□□□□□ -0.05
PTCD1-201ENST00000292478 CEP85Q6P2H3 762 aa14.74□□□□□ -0.05
PTCD1-201ENST00000292478 NUP88Q99567 741 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms