RNA–Protein interactions for RNA: ENST00000292408.8

FGFR4-201, Transcript of fibroblast growth factor receptor 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene FGFR4, Length 3,122 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-201ENST00000292408 BICD2Q8TD16 824 aa19.54■□□□□ 0.72
FGFR4-201ENST00000292408 EAF2Q96CJ1 260 aaPredicted RBP19.54■□□□□ 0.72
FGFR4-201ENST00000292408 FUCA2Q9BTY2 467 aa19.54■□□□□ 0.72
FGFR4-201ENST00000292408 USP31Q70CQ4 1352 aa19.54■□□□□ 0.72
FGFR4-201ENST00000292408 TMEM2Q9UHN6 1383 aa19.54■□□□□ 0.72
FGFR4-201ENST00000292408 ERCC4Q92889 916 aaPredicted RBP19.54■□□□□ 0.72
FGFR4-201ENST00000292408 TYRO3Q06418 890 aa19.53■□□□□ 0.72
FGFR4-201ENST00000292408 TNMDQ9H2S6 317 aa19.53■□□□□ 0.72
FGFR4-201ENST00000292408 TNRQ92752 1358 aa19.53■□□□□ 0.72
FGFR4-201ENST00000292408 CCDC94Q9BW85 323 aaPredicted RBP19.53■□□□□ 0.72
FGFR4-201ENST00000292408 LETM1O95202 739 aaPredicted RBP19.52■□□□□ 0.72
FGFR4-201ENST00000292408 U2AF2P26368 475 aaKnown RBP eCLIP19.52■□□□□ 0.721e-5■□□□□ 9.3
FGFR4-201ENST00000292408 KRT85P78386 507 aa19.52■□□□□ 0.72
FGFR4-201ENST00000292408 MAP3K11Q16584 847 aa19.52■□□□□ 0.72
FGFR4-201ENST00000292408 KIAA1524Q8TCG1 905 aa19.52■□□□□ 0.72
FGFR4-201ENST00000292408 KDRP35968 1356 aa19.52■□□□□ 0.72
FGFR4-201ENST00000292408 NRXN3Q9Y4C0 1643 aa19.52■□□□□ 0.72
FGFR4-201ENST00000292408 CCDC171Q6TFL3 1326 aa19.52■□□□□ 0.72
FGFR4-201ENST00000292408 MYL6BP14649 208 aa19.52■□□□□ 0.72
FGFR4-201ENST00000292408 VPS53Q5VIR6 699 aa19.52■□□□□ 0.72
FGFR4-201ENST00000292408 ZNF589Q86UQ0 364 aaPredicted RBP19.52■□□□□ 0.72
FGFR4-201ENST00000292408 SPATA32Q96LK8 384 aa19.52■□□□□ 0.72
FGFR4-201ENST00000292408 DNAJC25Q9H1X3 360 aa19.52■□□□□ 0.72
FGFR4-201ENST00000292408 ZSWIM6Q9HCJ5 1215 aa19.52■□□□□ 0.72
FGFR4-201ENST00000292408 CCDC129Q6ZRS4 1044 aa19.51■□□□□ 0.71
FGFR4-201ENST00000292408 AOX1Q06278 1338 aa19.51■□□□□ 0.71
FGFR4-201ENST00000292408 SLFNL1Q499Z3 407 aa19.51■□□□□ 0.71
FGFR4-201ENST00000292408 EID1Q9Y6B2 187 aa19.51■□□□□ 0.71
FGFR4-201ENST00000292408 MRVI1Q9Y6F6 885 aa19.51■□□□□ 0.71
FGFR4-201ENST00000292408 MON2Q7Z3U7 1717 aa19.51■□□□□ 0.71
FGFR4-201ENST00000292408 SLC27A2O14975 620 aa19.51■□□□□ 0.71
FGFR4-201ENST00000292408 HSP90B1P14625 803 aaKnown RBP19.51■□□□□ 0.71
FGFR4-201ENST00000292408 G3BP1Q13283 466 aaKnown RBP eCLIP19.51■□□□□ 0.71
FGFR4-201ENST00000292408 BLOC1S2Q6QNY1 142 aa19.51■□□□□ 0.71
FGFR4-201ENST00000292408 SIRT1Q96EB6 747 aa19.51■□□□□ 0.71
FGFR4-201ENST00000292408 SUCLG2Q96I99 432 aa19.51■□□□□ 0.71
FGFR4-201ENST00000292408 HMGN5P82970 282 aaKnown RBP19.5■□□□□ 0.71
FGFR4-201ENST00000292408 CHAF1AQ13111 956 aaPredicted RBP19.5■□□□□ 0.71
FGFR4-201ENST00000292408 FTOQ9C0B1 505 aaKnown RBP eCLIP19.5■□□□□ 0.71
FGFR4-201ENST00000292408 BICC1Q9H694 974 aaKnown RBP19.5■□□□□ 0.71
FGFR4-201ENST00000292408 NECTIN1Q15223 517 aa19.5■□□□□ 0.71
FGFR4-201ENST00000292408 PRIMPOLQ96LW4 560 aa19.5■□□□□ 0.71
FGFR4-201ENST00000292408 CBX8Q9HC52 389 aa19.5■□□□□ 0.71
FGFR4-201ENST00000292408 ITSN1Q15811 1721 aa19.5■□□□□ 0.71
FGFR4-201ENST00000292408 NR1I2O75469 434 aa19.49■□□□□ 0.71
FGFR4-201ENST00000292408 GPATCH3Q96I76 525 aa19.49■□□□□ 0.71
FGFR4-201ENST00000292408 PTPRUQ92729 1446 aa19.49■□□□□ 0.71
FGFR4-201ENST00000292408 TTC21AQ8NDW8 1320 aa19.49■□□□□ 0.71
FGFR4-201ENST00000292408 SASH1O94885 1247 aa19.49■□□□□ 0.71
FGFR4-201ENST00000292408 SLC39A6Q13433 755 aa19.49■□□□□ 0.71
FGFR4-201ENST00000292408 ARID5BQ14865 1188 aa19.49■□□□□ 0.71
FGFR4-201ENST00000292408 ADAMTS13Q76LX8 1427 aa19.49■□□□□ 0.71
FGFR4-201ENST00000292408 SEC62Q99442 399 aaKnown RBP19.49■□□□□ 0.71
FGFR4-201ENST00000292408 HTATSF1O43719 755 aaKnown RBP19.49■□□□□ 0.71
FGFR4-201ENST00000292408 HSP90AB4PQ58FF6 505 aa19.49■□□□□ 0.71
FGFR4-201ENST00000292408 PDCL2Q8N4E4 241 aa19.49■□□□□ 0.71
FGFR4-201ENST00000292408 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.48■□□□□ 0.71
FGFR4-201ENST00000292408 V9GYY5 206 aaPredicted RBP19.48■□□□□ 0.71
FGFR4-201ENST00000292408 SETD1AO15047 1707 aaKnown RBP19.48■□□□□ 0.71
FGFR4-201ENST00000292408 ADCY9O60503 1353 aa19.48■□□□□ 0.71
FGFR4-201ENST00000292408 KCNA6P17658 529 aa19.48■□□□□ 0.71
FGFR4-201ENST00000292408 GUCY1B3Q02153 619 aa19.48■□□□□ 0.71
FGFR4-201ENST00000292408 FAM200AQ8TCP9 573 aa19.48■□□□□ 0.71
FGFR4-201ENST00000292408 DNAJC2Q99543 621 aaKnown RBP19.48■□□□□ 0.71
FGFR4-201ENST00000292408 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.48■□□□□ 0.71
FGFR4-201ENST00000292408 ZSCAN31Q96LW9 406 aaPredicted RBP19.47■□□□□ 0.71
FGFR4-201ENST00000292408 NPHP1O15259 732 aa19.47■□□□□ 0.71
FGFR4-201ENST00000292408 MTERF4Q7Z6M4 381 aaKnown RBP19.47■□□□□ 0.71
FGFR4-201ENST00000292408 EVI5LQ96CN4 794 aa19.47■□□□□ 0.71
FGFR4-201ENST00000292408 SH2B1Q9NRF2 756 aaPredicted RBP19.47■□□□□ 0.71
FGFR4-201ENST00000292408 SPTLC3Q9NUV7 552 aa19.46■□□□□ 0.71
FGFR4-201ENST00000292408 PPP6R1Q9UPN7 881 aa19.46■□□□□ 0.71
FGFR4-201ENST00000292408 NRKQ7Z2Y5 1582 aa19.46■□□□□ 0.71
FGFR4-201ENST00000292408 GOLGA6L6A8MZA4 724 aa19.45■□□□□ 0.7
FGFR4-201ENST00000292408 SYTL4Q96C24 671 aaPredicted RBP19.45■□□□□ 0.7
FGFR4-201ENST00000292408 TTC41PQ6P2S7 1318 aa19.45■□□□□ 0.7
FGFR4-201ENST00000292408 H3BQV1 296 aa19.45■□□□□ 0.7
FGFR4-201ENST00000292408 IFFO2Q5TF58 517 aa19.45■□□□□ 0.7
FGFR4-201ENST00000292408 ZNF165P49910 485 aa19.45■□□□□ 0.7
FGFR4-201ENST00000292408 LEO1Q8WVC0 666 aaPredicted RBP19.45■□□□□ 0.7
FGFR4-201ENST00000292408 RIC3Q7Z5B4 369 aa19.44■□□□□ 0.7
FGFR4-201ENST00000292408 BRF1Q92994 677 aa19.44■□□□□ 0.7
FGFR4-201ENST00000292408 PGBD1Q96JS3 809 aa19.44■□□□□ 0.7
FGFR4-201ENST00000292408 DBF4Q9UBU7 674 aaPredicted RBP19.44■□□□□ 0.7
FGFR4-201ENST00000292408 TOB2Q14106 344 aaPredicted RBP19.44■□□□□ 0.7
FGFR4-201ENST00000292408 CHST3Q7LGC8 479 aa19.44■□□□□ 0.7
FGFR4-201ENST00000292408 FILIP1Q7Z7B0 1213 aa19.44■□□□□ 0.7
FGFR4-201ENST00000292408 MAP4K1Q92918 833 aa19.44■□□□□ 0.7
FGFR4-201ENST00000292408 KAZALD1Q96I82 304 aa19.44■□□□□ 0.7
FGFR4-201ENST00000292408 TRMT1Q9NXH9 659 aaKnown RBP19.44■□□□□ 0.7
FGFR4-201ENST00000292408 TECPR2O15040 1411 aa19.44■□□□□ 0.7
FGFR4-201ENST00000292408 SPATA31D1Q6ZQQ2 1576 aa19.43■□□□□ 0.7
FGFR4-201ENST00000292408 CCT2P78371 535 aaKnown RBP19.43■□□□□ 0.7
FGFR4-201ENST00000292408 IL17RAQ96F46 866 aa19.43■□□□□ 0.7
FGFR4-201ENST00000292408 AKAP12Q02952 1782 aa19.43■□□□□ 0.7
FGFR4-201ENST00000292408 CCDC144BQ3MJ40 725 aa19.42■□□□□ 0.7
FGFR4-201ENST00000292408 EPHA10Q5JZY3 1008 aa19.42■□□□□ 0.7
FGFR4-201ENST00000292408 CCDC144CPQ8IYA2 1237 aa19.42■□□□□ 0.7
FGFR4-201ENST00000292408 TNNT1P13805 278 aa19.42■□□□□ 0.7
FGFR4-201ENST00000292408 TPD52L1Q16890 204 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms