RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 RWDD1Q9H446 243 aaPredicted RBP11.99□□□□□ -0.49
LRTOMT-201ENST00000289488 TNS1Q9HBL0 1735 aaKnown RBP11.99□□□□□ -0.49
LRTOMT-201ENST00000289488 CNTNAP4Q9C0A0 1308 aa11.98□□□□□ -0.49
LRTOMT-201ENST00000289488 HDAC1Q13547 482 aaPredicted RBP11.98□□□□□ -0.49
LRTOMT-201ENST00000289488 CAMTA2O94983 1202 aa11.98□□□□□ -0.49
LRTOMT-201ENST00000289488 TCIRG1Q13488 830 aa11.98□□□□□ -0.49
LRTOMT-201ENST00000289488 EPHA10Q5JZY3 1008 aa11.98□□□□□ -0.49
LRTOMT-201ENST00000289488 ANKRD44Q8N8A2 993 aa11.98□□□□□ -0.49
LRTOMT-201ENST00000289488 SUCLG2Q96I99 432 aa11.98□□□□□ -0.49
LRTOMT-201ENST00000289488 SRP68Q9UHB9 627 aaKnown RBP11.98□□□□□ -0.49
LRTOMT-201ENST00000289488 FAM177BA6PVY3 158 aa11.97□□□□□ -0.49
LRTOMT-201ENST00000289488 APBB1O00213 710 aa11.97□□□□□ -0.49
LRTOMT-201ENST00000289488 CLCN1P35523 988 aa11.97□□□□□ -0.49
LRTOMT-201ENST00000289488 BICC1Q9H694 974 aaKnown RBP11.97□□□□□ -0.49
LRTOMT-201ENST00000289488 UBN2Q6ZU65 1347 aa11.97□□□□□ -0.49
LRTOMT-201ENST00000289488 FAM89AQ96GI7 184 aa11.97□□□□□ -0.49
LRTOMT-201ENST00000289488 ISCA1Q9BUE6 129 aa11.97□□□□□ -0.49
LRTOMT-201ENST00000289488 ANTXR1Q9H6X2 564 aa11.97□□□□□ -0.49
LRTOMT-201ENST00000289488 CWC25Q9NXE8 425 aaPredicted RBP11.97□□□□□ -0.49
LRTOMT-201ENST00000289488 ANKRD36CQ5JPF3 1778 aa11.96□□□□□ -0.49
LRTOMT-201ENST00000289488 RPS6KA4O75676 772 aa11.96□□□□□ -0.49
LRTOMT-201ENST00000289488 EN1Q05925 392 aaPredicted RBP11.96□□□□□ -0.49
LRTOMT-201ENST00000289488 PPP1R42Q7Z4L9 355 aa11.96□□□□□ -0.49
LRTOMT-201ENST00000289488 ARHGEF1Q92888 912 aaKnown RBP11.96□□□□□ -0.49
LRTOMT-201ENST00000289488 AK7Q96M32 723 aa11.96□□□□□ -0.49
LRTOMT-201ENST00000289488 RTCBQ9Y3I0 505 aaKnown RBP11.96□□□□□ -0.49
LRTOMT-201ENST00000289488 UBR3Q6ZT12 1888 aa11.96□□□□□ -0.5
LRTOMT-201ENST00000289488 RC3H1Q5TC82 1133 aaKnown RBP11.95□□□□□ -0.5
LRTOMT-201ENST00000289488 RPAP2Q8IXW5 612 aaPredicted RBP11.95□□□□□ -0.5
LRTOMT-201ENST00000289488 C4AP0C0L4 1744 aa11.95□□□□□ -0.5
LRTOMT-201ENST00000289488 UTYO14607 1347 aa11.95□□□□□ -0.5
LRTOMT-201ENST00000289488 FSD2A1L4K1 749 aa11.95□□□□□ -0.5
LRTOMT-201ENST00000289488 ERVV-1B6SEH8 477 aa11.95□□□□□ -0.5
LRTOMT-201ENST00000289488 PLSCR1O15162 318 aa11.95□□□□□ -0.5
LRTOMT-201ENST00000289488 SRGAP3O43295 1099 aa11.95□□□□□ -0.5
LRTOMT-201ENST00000289488 RRP9O43818 475 aaKnown RBP11.95□□□□□ -0.5
LRTOMT-201ENST00000289488 CASP7P55210 303 aa11.95□□□□□ -0.5
LRTOMT-201ENST00000289488 SLC27A3Q5K4L6 730 aa11.95□□□□□ -0.5
LRTOMT-201ENST00000289488 USPL1Q5W0Q7 1092 aa11.95□□□□□ -0.5
LRTOMT-201ENST00000289488 BICDL1Q6ZP65 573 aa11.95□□□□□ -0.5
LRTOMT-201ENST00000289488 NLRP10Q86W26 655 aa11.95□□□□□ -0.5
LRTOMT-201ENST00000289488 CCDC191Q8NCU4 936 aa11.95□□□□□ -0.5
LRTOMT-201ENST00000289488 NAP1L5Q96NT1 182 aaPredicted RBP11.95□□□□□ -0.5
LRTOMT-201ENST00000289488 SLKQ9H2G2 1235 aaPredicted RBP11.95□□□□□ -0.5
LRTOMT-201ENST00000289488 PDZRN3Q9UPQ7 1066 aa11.95□□□□□ -0.5
LRTOMT-201ENST00000289488 EXOC6BQ9Y2D4 811 aa11.95□□□□□ -0.5
LRTOMT-201ENST00000289488 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.94□□□□□ -0.5
LRTOMT-201ENST00000289488 GOLGA6L3A6NEY3 463 aa11.94□□□□□ -0.5
LRTOMT-201ENST00000289488 ATP8B2P98198 1209 aa11.94□□□□□ -0.5
LRTOMT-201ENST00000289488 EZH2Q15910 746 aaKnown RBP11.94□□□□□ -0.5
LRTOMT-201ENST00000289488 ZNF827Q17R98 1081 aa11.94□□□□□ -0.5
LRTOMT-201ENST00000289488 DEFB132Q7Z7B7 95 aa11.94□□□□□ -0.5
LRTOMT-201ENST00000289488 SMC5Q8IY18 1101 aa11.94□□□□□ -0.5
LRTOMT-201ENST00000289488 BCL2L12Q9HB09 334 aa11.94□□□□□ -0.5
LRTOMT-201ENST00000289488 H7C1W4 665 aa11.94□□□□□ -0.5
LRTOMT-201ENST00000289488 XRCC6P12956 609 aaKnown RBP eCLIP11.94□□□□□ -0.5
LRTOMT-201ENST00000289488 KLHDC4Q8TBB5 520 aa11.94□□□□□ -0.5
LRTOMT-201ENST00000289488 BCORQ6W2J9 1755 aa11.94□□□□□ -0.5
LRTOMT-201ENST00000289488 ZNF34Q8IZ26 560 aa11.93□□□□□ -0.5
LRTOMT-201ENST00000289488 CCDC85AQ96PX6 553 aaPredicted RBP11.93□□□□□ -0.5
LRTOMT-201ENST00000289488 LNPKQ9C0E8 428 aa11.93□□□□□ -0.5
LRTOMT-201ENST00000289488 PA2G4Q9UQ80 394 aaKnown RBP11.93□□□□□ -0.5
LRTOMT-201ENST00000289488 NIP7Q9Y221 180 aaKnown RBP eCLIP11.93□□□□□ -0.5
LRTOMT-201ENST00000289488 SMARCA5O60264 1052 aaPredicted RBP11.93□□□□□ -0.5
LRTOMT-201ENST00000289488 HSP90AA1P07900 732 aaKnown RBP11.93□□□□□ -0.5
LRTOMT-201ENST00000289488 HSP90AA2PQ14568 343 aaPredicted RBP11.93□□□□□ -0.5
LRTOMT-201ENST00000289488 TRAPPC3LQ5T215 181 aa11.93□□□□□ -0.5
LRTOMT-201ENST00000289488 ANKRD45Q5TZF3 282 aa11.93□□□□□ -0.5
LRTOMT-201ENST00000289488 SUSD4Q5VX71 490 aa11.93□□□□□ -0.5
LRTOMT-201ENST00000289488 DCTPP1Q9H773 170 aa11.93□□□□□ -0.5
LRTOMT-201ENST00000289488 SEC24BO95487 1268 aa11.92□□□□□ -0.5
LRTOMT-201ENST00000289488 RFC4P35249 363 aa11.92□□□□□ -0.5
LRTOMT-201ENST00000289488 TRIM28Q13263 835 aaKnown RBP11.92□□□□□ -0.5
LRTOMT-201ENST00000289488 TBC1D9BQ66K14 1250 aa11.92□□□□□ -0.5
LRTOMT-201ENST00000289488 NUTM1Q86Y26 1132 aa11.92□□□□□ -0.5
LRTOMT-201ENST00000289488 NARFQ9UHQ1 456 aa11.92□□□□□ -0.5
LRTOMT-201ENST00000289488 TRMT112Q9UI30 125 aaKnown RBP11.92□□□□□ -0.5
LRTOMT-201ENST00000289488 ZPR1O75312 459 aa11.92□□□□□ -0.5
LRTOMT-201ENST00000289488 FOXO4P98177 505 aa11.92□□□□□ -0.5
LRTOMT-201ENST00000289488 SSH3Q8TE77 659 aa11.92□□□□□ -0.5
LRTOMT-201ENST00000289488 TFCP2L1Q9NZI6 479 aa11.92□□□□□ -0.5
LRTOMT-201ENST00000289488 TUBGCP6Q96RT7 1819 aa11.92□□□□□ -0.5
LRTOMT-201ENST00000289488 HSP90AB3PQ58FF7 597 aa11.91□□□□□ -0.5
LRTOMT-201ENST00000289488 LMBR1LQ6UX01 489 aa11.91□□□□□ -0.5
LRTOMT-201ENST00000289488 CCDC24Q8N4L8 307 aa11.91□□□□□ -0.5
LRTOMT-201ENST00000289488 ZBTB38Q8NAP3 1195 aaPredicted RBP11.91□□□□□ -0.5
LRTOMT-201ENST00000289488 CAMKK2Q96RR4 588 aa11.91□□□□□ -0.5
LRTOMT-201ENST00000289488 CHMP3Q9Y3E7 222 aa11.91□□□□□ -0.5
LRTOMT-201ENST00000289488 SCN7AQ01118 1682 aa11.91□□□□□ -0.5
LRTOMT-201ENST00000289488 HMMRO75330 724 aa11.91□□□□□ -0.5
LRTOMT-201ENST00000289488 NUCB1Q02818 461 aa11.91□□□□□ -0.5
LRTOMT-201ENST00000289488 POLA2Q14181 598 aa11.91□□□□□ -0.5
LRTOMT-201ENST00000289488 C16orf71Q8IYS4 520 aaPredicted RBP11.91□□□□□ -0.5
LRTOMT-201ENST00000289488 ZMYND15Q9H091 742 aa11.91□□□□□ -0.5
LRTOMT-201ENST00000289488 SIL1Q9H173 461 aa11.91□□□□□ -0.5
LRTOMT-201ENST00000289488 SURF6O75683 361 aaKnown RBP11.9□□□□□ -0.5
LRTOMT-201ENST00000289488 HCLS1P14317 486 aaPredicted RBP11.9□□□□□ -0.5
LRTOMT-201ENST00000289488 GCC1Q96CN9 775 aa11.9□□□□□ -0.5
LRTOMT-201ENST00000289488 UPF2Q9HAU5 1272 aaKnown RBP11.9□□□□□ -0.5
LRTOMT-201ENST00000289488 USP42Q9H9J4 1324 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms