RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 NECAB1Q8N987 351 aa7.29□□□□□ -1.24
TNFSF4-201ENST00000281834 PLBD2Q8NHP8 589 aa7.29□□□□□ -1.24
TNFSF4-201ENST00000281834 RUFY2Q8WXA3 655 aa7.29□□□□□ -1.24
TNFSF4-201ENST00000281834 CWC25Q9NXE8 425 aaPredicted RBP7.29□□□□□ -1.24
TNFSF4-201ENST00000281834 RBM27Q9P2N5 1060 aaKnown RBP7.29□□□□□ -1.24
TNFSF4-201ENST00000281834 DBNLQ9UJU6 430 aaKnown RBP7.29□□□□□ -1.24
TNFSF4-201ENST00000281834 SNX14Q9Y5W7 946 aa7.29□□□□□ -1.24
TNFSF4-201ENST00000281834 DDIT3P35638 169 aa7.29□□□□□ -1.24
TNFSF4-201ENST00000281834 FGD1P98174 961 aa7.29□□□□□ -1.24
TNFSF4-201ENST00000281834 FKBP4Q02790 459 aaKnown RBP eCLIP7.29□□□□□ -1.24
TNFSF4-201ENST00000281834 PTPN12Q05209 780 aaKnown RBP7.29□□□□□ -1.24
TNFSF4-201ENST00000281834 LRRC24Q50LG9 513 aa7.29□□□□□ -1.24
TNFSF4-201ENST00000281834 HSP90AB3PQ58FF7 597 aa7.29□□□□□ -1.24
TNFSF4-201ENST00000281834 CCDC83Q8IWF9 413 aa7.29□□□□□ -1.24
TNFSF4-201ENST00000281834 PIGBQ92521 554 aa7.29□□□□□ -1.24
TNFSF4-201ENST00000281834 PUS3Q9BZE2 481 aaKnown RBP7.29□□□□□ -1.24
TNFSF4-201ENST00000281834 FAM208AQ9UK61 1670 aaKnown RBP7.29□□□□□ -1.24
TNFSF4-201ENST00000281834 GOLIM4O00461 696 aa7.28□□□□□ -1.24
TNFSF4-201ENST00000281834 FOSBP53539 338 aa7.28□□□□□ -1.24
TNFSF4-201ENST00000281834 AK2P54819 239 aa7.28□□□□□ -1.24
TNFSF4-201ENST00000281834 EVI5LQ96CN4 794 aa7.28□□□□□ -1.24
TNFSF4-201ENST00000281834 LRRC2Q9BYS8 371 aa7.28□□□□□ -1.24
TNFSF4-201ENST00000281834 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.28□□□□□ -1.24
TNFSF4-201ENST00000281834 TAF6LQ9Y6J9 622 aa7.28□□□□□ -1.24
TNFSF4-201ENST00000281834 HEG1Q9ULI3 1381 aa7.28□□□□□ -1.24
TNFSF4-201ENST00000281834 RAD50Q92878 1312 aa7.28□□□□□ -1.24
TNFSF4-201ENST00000281834 XRCC6P12956 609 aaKnown RBP eCLIP7.28□□□□□ -1.24
TNFSF4-201ENST00000281834 ZKSCAN1P17029 563 aaPredicted RBP7.28□□□□□ -1.24
TNFSF4-201ENST00000281834 KCNQ4P56696 695 aa7.28□□□□□ -1.24
TNFSF4-201ENST00000281834 MTX1Q13505 466 aa7.28□□□□□ -1.24
TNFSF4-201ENST00000281834 ZNF589Q86UQ0 364 aaPredicted RBP7.28□□□□□ -1.24
TNFSF4-201ENST00000281834 CARD10Q9BWT7 1032 aa7.28□□□□□ -1.24
TNFSF4-201ENST00000281834 LSG1Q9H089 658 aaKnown RBP7.28□□□□□ -1.24
TNFSF4-201ENST00000281834 RBM8AQ9Y5S9 174 aaKnown RBP7.28□□□□□ -1.24
TNFSF4-201ENST00000281834 LRRC37A3O60309 1634 aa7.28□□□□□ -1.24
TNFSF4-201ENST00000281834 SOS2Q07890 1332 aaPredicted RBP7.28□□□□□ -1.24
TNFSF4-201ENST00000281834 TTC41PQ6P2S7 1318 aa7.28□□□□□ -1.24
TNFSF4-201ENST00000281834 HSPA4P34932 840 aa7.28□□□□□ -1.24
TNFSF4-201ENST00000281834 PRIM1P49642 420 aaKnown RBP7.28□□□□□ -1.24
TNFSF4-201ENST00000281834 TNNI3KQ59H18 835 aa7.28□□□□□ -1.24
TNFSF4-201ENST00000281834 FPGT-TNNI3KV9GXZ4 949 aa7.28□□□□□ -1.24
TNFSF4-201ENST00000281834 CAMTA1Q9Y6Y1 1673 aa7.28□□□□□ -1.24
TNFSF4-201ENST00000281834 PXDNLA1KZ92 1463 aa7.27□□□□□ -1.25
TNFSF4-201ENST00000281834 VPS37CA5D8V6 355 aaPredicted RBP7.27□□□□□ -1.25
TNFSF4-201ENST00000281834 LARGE1O95461 756 aa7.27□□□□□ -1.25
TNFSF4-201ENST00000281834 EXOC5O00471 708 aa7.27□□□□□ -1.25
TNFSF4-201ENST00000281834 CCDC57Q2TAC2 916 aa7.27□□□□□ -1.25
TNFSF4-201ENST00000281834 KIF6Q6ZMV9 814 aa7.27□□□□□ -1.25
TNFSF4-201ENST00000281834 LRP10Q7Z4F1 713 aa7.27□□□□□ -1.25
TNFSF4-201ENST00000281834 FERMT3Q86UX7 667 aa7.27□□□□□ -1.25
TNFSF4-201ENST00000281834 GAS2L3Q86XJ1 694 aa7.27□□□□□ -1.25
TNFSF4-201ENST00000281834 PDRG1Q9NUG6 133 aa7.27□□□□□ -1.25
TNFSF4-201ENST00000281834 L1TD1Q5T7N2 865 aaKnown RBP7.26□□□□□ -1.25
TNFSF4-201ENST00000281834 ZDHHC9Q9Y397 364 aa7.26□□□□□ -1.25
TNFSF4-201ENST00000281834 ERVV-2B6SEH9 535 aa7.26□□□□□ -1.25
TNFSF4-201ENST00000281834 HLFQ16534 295 aa7.26□□□□□ -1.25
TNFSF4-201ENST00000281834 RNF214Q8ND24 703 aa7.26□□□□□ -1.25
TNFSF4-201ENST00000281834 HELBQ8NG08 1087 aaPredicted RBP7.26□□□□□ -1.25
TNFSF4-201ENST00000281834 CWC22Q9HCG8 908 aaKnown RBP7.26□□□□□ -1.25
TNFSF4-201ENST00000281834 SMC3Q9UQE7 1217 aa7.26□□□□□ -1.25
TNFSF4-201ENST00000281834 CYP46A1Q9Y6A2 500 aa7.26□□□□□ -1.25
TNFSF4-201ENST00000281834 STRCP1A6NGW2 1772 aa7.26□□□□□ -1.25
TNFSF4-201ENST00000281834 AOX1Q06278 1338 aa7.26□□□□□ -1.25
TNFSF4-201ENST00000281834 CCDC171Q6TFL3 1326 aa7.26□□□□□ -1.25
TNFSF4-201ENST00000281834 NCOA3Q9Y6Q9 1424 aa7.26□□□□□ -1.25
TNFSF4-201ENST00000281834 FIBPO43427 364 aa7.26□□□□□ -1.25
TNFSF4-201ENST00000281834 STARD3NLO95772 234 aa7.26□□□□□ -1.25
TNFSF4-201ENST00000281834 HSP90B1P14625 803 aaKnown RBP7.26□□□□□ -1.25
TNFSF4-201ENST00000281834 WASHC4Q2M389 1173 aa7.26□□□□□ -1.25
TNFSF4-201ENST00000281834 SMIM5Q71RC9 77 aa7.26□□□□□ -1.25
TNFSF4-201ENST00000281834 ZBTB1Q9Y2K1 713 aa7.26□□□□□ -1.25
TNFSF4-201ENST00000281834 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.25□□□□□ -1.25
TNFSF4-201ENST00000281834 CREB3L3Q68CJ9 461 aa7.25□□□□□ -1.25
TNFSF4-201ENST00000281834 PI16Q6UXB8 463 aa7.25□□□□□ -1.25
TNFSF4-201ENST00000281834 RUFY3Q7L099 469 aa7.25□□□□□ -1.25
TNFSF4-201ENST00000281834 GRPEL1Q9HAV7 217 aa7.25□□□□□ -1.25
TNFSF4-201ENST00000281834 CEP126Q9P2H0 1117 aa7.25□□□□□ -1.25
TNFSF4-201ENST00000281834 NSFL1CQ9UNZ2 370 aaKnown RBP7.25□□□□□ -1.25
TNFSF4-201ENST00000281834 OVOS2A0A0G2JMS6 1433 aa7.25□□□□□ -1.25
TNFSF4-201ENST00000281834 TRPM3Q9HCF6 1732 aaPredicted RBP7.25□□□□□ -1.25
TNFSF4-201ENST00000281834 CPDO75976 1380 aa7.25□□□□□ -1.25
TNFSF4-201ENST00000281834 SNAP23O00161 211 aa7.25□□□□□ -1.25
TNFSF4-201ENST00000281834 ANAPC15P60006 121 aa7.25□□□□□ -1.25
TNFSF4-201ENST00000281834 FAM182BQ5T319 152 aa7.25□□□□□ -1.25
TNFSF4-201ENST00000281834 CHST3Q7LGC8 479 aa7.25□□□□□ -1.25
TNFSF4-201ENST00000281834 COPRSQ9NQ92 184 aa7.25□□□□□ -1.25
TNFSF4-201ENST00000281834 ATG3Q9NT62 314 aa7.25□□□□□ -1.25
TNFSF4-201ENST00000281834 TRMT112Q9UI30 125 aaKnown RBP7.25□□□□□ -1.25
TNFSF4-201ENST00000281834 DCCP43146 1447 aa7.25□□□□□ -1.25
TNFSF4-201ENST00000281834 COL5A2P05997 1499 aaPredicted RBP7.25□□□□□ -1.25
TNFSF4-201ENST00000281834 A0A1B0GUL7 405 aa7.25□□□□□ -1.25
TNFSF4-201ENST00000281834 IFIT1P09914 478 aaKnown RBP7.25□□□□□ -1.25
TNFSF4-201ENST00000281834 MCM2P49736 904 aa7.25□□□□□ -1.25
TNFSF4-201ENST00000281834 FAM173BQ6P4H8 233 aa7.25□□□□□ -1.25
TNFSF4-201ENST00000281834 KDM4AO75164 1064 aa7.24□□□□□ -1.25
TNFSF4-201ENST00000281834 ADORA1P30542 326 aa7.24□□□□□ -1.25
TNFSF4-201ENST00000281834 RFX5P48382 616 aaPredicted RBP7.24□□□□□ -1.25
TNFSF4-201ENST00000281834 HAND2P61296 217 aa7.24□□□□□ -1.25
TNFSF4-201ENST00000281834 FOXO4P98177 505 aa7.24□□□□□ -1.25
TNFSF4-201ENST00000281834 BLOC1S2Q6QNY1 142 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms