RNA–Protein interactions for RNA: ENST00000281043.3

MYCN-201, Transcript of MYCN proto-oncogene, bHLH transcription factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MYCN, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYCN-201ENST00000281043 ST3GAL1Q11201 340 aa25.36■■□□□ 1.65
MYCN-201ENST00000281043 LARP1BQ659C4 914 aaKnown RBP25.36■■□□□ 1.65
MYCN-201ENST00000281043 ANKLE2Q86XL3 938 aa25.36■■□□□ 1.65
MYCN-201ENST00000281043 ZNF592Q92610 1267 aa25.36■■□□□ 1.65
MYCN-201ENST00000281043 EYA1Q99502 592 aa25.36■■□□□ 1.65
MYCN-201ENST00000281043 ME3Q16798 604 aa25.35■■□□□ 1.65
MYCN-201ENST00000281043 KIF1BPQ96EK5 621 aa25.35■■□□□ 1.65
MYCN-201ENST00000281043 ELP1O95163 1332 aa25.35■■□□□ 1.65
MYCN-201ENST00000281043 PRPF40BQ6NWY9 871 aaKnown RBP25.35■■□□□ 1.65
MYCN-201ENST00000281043 FERMT3Q86UX7 667 aa25.35■■□□□ 1.65
MYCN-201ENST00000281043 ABTB2Q8N961 1025 aa25.35■■□□□ 1.65
MYCN-201ENST00000281043 NECAB1Q8N987 351 aa25.35■■□□□ 1.65
MYCN-201ENST00000281043 CACTINQ8WUQ7 758 aaKnown RBP25.35■■□□□ 1.65
MYCN-201ENST00000281043 ZSWIM6Q9HCJ5 1215 aa25.35■■□□□ 1.65
MYCN-201ENST00000281043 DACT1Q9NYF0 836 aa25.35■■□□□ 1.65
MYCN-201ENST00000281043 NALCNQ8IZF0 1738 aa25.35■■□□□ 1.65
MYCN-201ENST00000281043 LTV1Q96GA3 475 aaPredicted RBP25.34■■□□□ 1.65
MYCN-201ENST00000281043 FAM53CQ9NYF3 392 aa25.34■■□□□ 1.65
MYCN-201ENST00000281043 RGPD1P0DJD0 1748 aa25.34■■□□□ 1.65
MYCN-201ENST00000281043 PTH1RQ03431 593 aa25.34■■□□□ 1.65
MYCN-201ENST00000281043 POLA2Q14181 598 aa25.33■■□□□ 1.65
MYCN-201ENST00000281043 FAM173BQ6P4H8 233 aa25.33■■□□□ 1.65
MYCN-201ENST00000281043 TM6SF1Q9BZW5 370 aa25.33■■□□□ 1.65
MYCN-201ENST00000281043 FLT4P35916 1363 aa25.33■■□□□ 1.65
MYCN-201ENST00000281043 TDRD7Q8NHU6 1098 aaKnown RBP25.33■■□□□ 1.65
MYCN-201ENST00000281043 CLIP2Q9UDT6 1046 aa25.33■■□□□ 1.65
MYCN-201ENST00000281043 SBNO1A3KN83 1393 aa25.33■■□□□ 1.64
MYCN-201ENST00000281043 GOLGA6L4A6NEF3 574 aa25.33■■□□□ 1.64
MYCN-201ENST00000281043 CDC37L1Q7L3B6 337 aa25.33■■□□□ 1.64
MYCN-201ENST00000281043 IPO4Q8TEX9 1081 aaKnown RBP25.33■■□□□ 1.64
MYCN-201ENST00000281043 RUFY2Q8WXA3 655 aa25.33■■□□□ 1.64
MYCN-201ENST00000281043 ZNF215Q9UL58 517 aaPredicted RBP25.33■■□□□ 1.64
MYCN-201ENST00000281043 PIK3C2AO00443 1686 aa25.32■■□□□ 1.64
MYCN-201ENST00000281043 DDX54Q8TDD1 881 aaKnown RBP25.32■■□□□ 1.64
MYCN-201ENST00000281043 BCL11BQ9C0K0 894 aaPredicted RBP25.32■■□□□ 1.64
MYCN-201ENST00000281043 FAM208AQ9UK61 1670 aaKnown RBP25.31■■□□□ 1.64
MYCN-201ENST00000281043 SRGAP3O43295 1099 aa25.31■■□□□ 1.64
MYCN-201ENST00000281043 CCDC171Q6TFL3 1326 aa25.31■■□□□ 1.64
MYCN-201ENST00000281043 CALCOCO1Q9P1Z2 691 aa25.31■■□□□ 1.64
MYCN-201ENST00000281043 FAM193AP78312 1265 aa25.3■■□□□ 1.64
MYCN-201ENST00000281043 DDX19AQ9NUU7 478 aaKnown RBP25.3■■□□□ 1.64
MYCN-201ENST00000281043 PDIA4P13667 645 aaKnown RBP25.3■■□□□ 1.64
MYCN-201ENST00000281043 CCDC144BQ3MJ40 725 aa25.3■■□□□ 1.64
MYCN-201ENST00000281043 CCDC144CPQ8IYA2 1237 aa25.3■■□□□ 1.64
MYCN-201ENST00000281043 TPCN1Q9ULQ1 816 aa25.3■■□□□ 1.64
MYCN-201ENST00000281043 PXDNLA1KZ92 1463 aa25.29■■□□□ 1.64
MYCN-201ENST00000281043 FBXO38Q6PIJ6 1188 aa25.29■■□□□ 1.64
MYCN-201ENST00000281043 ERICH4A6NGS2 130 aa25.29■■□□□ 1.64
MYCN-201ENST00000281043 GLRX3O76003 335 aaKnown RBP25.29■■□□□ 1.64
MYCN-201ENST00000281043 SPATA32Q96LK8 384 aa25.29■■□□□ 1.64
MYCN-201ENST00000281043 SCAND2PQ9GZW5 306 aaPredicted RBP25.29■■□□□ 1.64
MYCN-201ENST00000281043 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.29■■□□□ 1.64
MYCN-201ENST00000281043 V9GYY5 206 aaPredicted RBP25.29■■□□□ 1.64
MYCN-201ENST00000281043 MAP3K5Q99683 1374 aa25.28■■□□□ 1.64
MYCN-201ENST00000281043 PDCP20941 246 aa25.28■■□□□ 1.64
MYCN-201ENST00000281043 ZNF165P49910 485 aa25.28■■□□□ 1.64
MYCN-201ENST00000281043 RBM6P78332 1123 aaKnown RBP25.28■■□□□ 1.64
MYCN-201ENST00000281043 RBM43Q6ZSC3 357 aaKnown RBP25.28■■□□□ 1.64
MYCN-201ENST00000281043 KCNB2Q92953 911 aa25.28■■□□□ 1.64
MYCN-201ENST00000281043 CLSTN2Q9H4D0 955 aa25.28■■□□□ 1.64
MYCN-201ENST00000281043 PHF8Q9UPP1 1060 aa25.28■■□□□ 1.64
MYCN-201ENST00000281043 CACNA1FO60840 1977 aa25.28■■□□□ 1.64
MYCN-201ENST00000281043 HOXC9P31274 260 aa25.28■■□□□ 1.64
MYCN-201ENST00000281043 SLC20A2Q08357 652 aa25.28■■□□□ 1.64
MYCN-201ENST00000281043 SLFNL1Q499Z3 407 aa25.28■■□□□ 1.64
MYCN-201ENST00000281043 ERO1AQ96HE7 468 aa25.28■■□□□ 1.64
MYCN-201ENST00000281043 TFIP11Q9UBB9 837 aaKnown RBP25.28■■□□□ 1.64
MYCN-201ENST00000281043 ZKSCAN1P17029 563 aaPredicted RBP25.27■■□□□ 1.64
MYCN-201ENST00000281043 CDC25BP30305 580 aa25.27■■□□□ 1.64
MYCN-201ENST00000281043 PTPN14Q15678 1187 aa25.27■■□□□ 1.64
MYCN-201ENST00000281043 CREBRFQ8IUR6 639 aa25.27■■□□□ 1.64
MYCN-201ENST00000281043 USHBP1Q8N6Y0 703 aa25.27■■□□□ 1.64
MYCN-201ENST00000281043 NPHP3Q7Z494 1330 aa25.27■■□□□ 1.64
MYCN-201ENST00000281043 LRRC8AQ8IWT6 810 aa25.27■■□□□ 1.64
MYCN-201ENST00000281043 DNAJC25Q9H1X3 360 aa25.27■■□□□ 1.64
MYCN-201ENST00000281043 ANKARQ7Z5J8 1434 aa25.26■■□□□ 1.63
MYCN-201ENST00000281043 TTC41PQ6P2S7 1318 aa25.26■■□□□ 1.63
MYCN-201ENST00000281043 ELF2Q15723 593 aa25.26■■□□□ 1.63
MYCN-201ENST00000281043 NYAP1Q6ZVC0 841 aa25.26■■□□□ 1.63
MYCN-201ENST00000281043 N4BP2Q86UW6 1770 aaPredicted RBP25.26■■□□□ 1.63
MYCN-201ENST00000281043 IGSF1Q8N6C5 1336 aa25.26■■□□□ 1.63
MYCN-201ENST00000281043 USP27XA6NNY8 438 aa25.26■■□□□ 1.63
MYCN-201ENST00000281043 NECTIN1Q15223 517 aa25.26■■□□□ 1.63
MYCN-201ENST00000281043 ESCO1Q5FWF5 840 aa25.26■■□□□ 1.63
MYCN-201ENST00000281043 DNAJC2Q99543 621 aaKnown RBP25.26■■□□□ 1.63
MYCN-201ENST00000281043 USP42Q9H9J4 1324 aaKnown RBP25.25■■□□□ 1.63
MYCN-201ENST00000281043 NEMFO60524 1076 aa25.25■■□□□ 1.63
MYCN-201ENST00000281043 PHAXQ9H814 394 aaKnown RBP25.25■■□□□ 1.63
MYCN-201ENST00000281043 LEO1Q8WVC0 666 aaPredicted RBP25.24■■□□□ 1.63
MYCN-201ENST00000281043 CRYBG1Q9Y4K1 1723 aa25.24■■□□□ 1.63
MYCN-201ENST00000281043 TULP2O00295 520 aa25.24■■□□□ 1.63
MYCN-201ENST00000281043 NR1I2O75469 434 aa25.24■■□□□ 1.63
MYCN-201ENST00000281043 HSP90AB4PQ58FF6 505 aa25.24■■□□□ 1.63
MYCN-201ENST00000281043 OS9Q13438 667 aaPredicted RBP25.23■■□□□ 1.63
MYCN-201ENST00000281043 ST7Q9NRC1 585 aa25.23■■□□□ 1.63
MYCN-201ENST00000281043 HTATSF1O43719 755 aaKnown RBP25.23■■□□□ 1.63
MYCN-201ENST00000281043 NBPF7P0C2Y1 421 aaPredicted RBP25.23■■□□□ 1.63
MYCN-201ENST00000281043 KDRP35968 1356 aa25.23■■□□□ 1.63
MYCN-201ENST00000281043 CREB3L3Q68CJ9 461 aa25.22■■□□□ 1.63
MYCN-201ENST00000281043 BICD2Q8TD16 824 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms