RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 C1orf115Q9H7X2 142 aa10.74□□□□□ -0.69
TRIM43-201ENST00000272395 ISY1Q9ULR0 285 aaKnown RBP10.74□□□□□ -0.69
TRIM43-201ENST00000272395 LAMB4A4D0S4 1761 aa10.74□□□□□ -0.69
TRIM43-201ENST00000272395 TTLL7Q6ZT98 887 aa10.73□□□□□ -0.69
TRIM43-201ENST00000272395 LRP10Q7Z4F1 713 aa10.73□□□□□ -0.69
TRIM43-201ENST00000272395 ATF5Q9Y2D1 282 aaPredicted RBP10.73□□□□□ -0.69
TRIM43-201ENST00000272395 UBR3Q6ZT12 1888 aa10.73□□□□□ -0.69
TRIM43-201ENST00000272395 AIMP1Q12904 312 aaKnown RBP10.73□□□□□ -0.69
TRIM43-201ENST00000272395 CCDC30Q5VVM6 783 aa10.73□□□□□ -0.69
TRIM43-201ENST00000272395 USPL1Q5W0Q7 1092 aa10.73□□□□□ -0.69
TRIM43-201ENST00000272395 DZIP3Q86Y13 1208 aaKnown RBP10.73□□□□□ -0.69
TRIM43-201ENST00000272395 PLEKHM2Q8IWE5 1019 aa10.73□□□□□ -0.69
TRIM43-201ENST00000272395 FLAD1Q8NFF5 587 aa10.73□□□□□ -0.69
TRIM43-201ENST00000272395 KIF2CQ99661 725 aa10.73□□□□□ -0.69
TRIM43-201ENST00000272395 DDX21Q9NR30 783 aaKnown RBP eCLIP10.73□□□□□ -0.69
TRIM43-201ENST00000272395 USP42Q9H9J4 1324 aaKnown RBP10.72□□□□□ -0.69
TRIM43-201ENST00000272395 HMMRO75330 724 aa10.72□□□□□ -0.69
TRIM43-201ENST00000272395 TTC22Q5TAA0 569 aa10.72□□□□□ -0.69
TRIM43-201ENST00000272395 XAGE3Q8WTP9 111 aa10.72□□□□□ -0.69
TRIM43-201ENST00000272395 GBP4Q96PP9 640 aa10.72□□□□□ -0.69
TRIM43-201ENST00000272395 PHAXQ9H814 394 aaKnown RBP10.72□□□□□ -0.69
TRIM43-201ENST00000272395 DBF4Q9UBU7 674 aaPredicted RBP10.72□□□□□ -0.69
TRIM43-201ENST00000272395 ERBB4Q15303 1308 aa10.72□□□□□ -0.69
TRIM43-201ENST00000272395 CASZ1Q86V15 1759 aa10.71□□□□□ -0.69
TRIM43-201ENST00000272395 FSD2A1L4K1 749 aa10.71□□□□□ -0.69
TRIM43-201ENST00000272395 K7ELQ4 463 aaPredicted RBP10.71□□□□□ -0.69
TRIM43-201ENST00000272395 ZPR1O75312 459 aa10.71□□□□□ -0.69
TRIM43-201ENST00000272395 CAMTA2O94983 1202 aa10.71□□□□□ -0.69
TRIM43-201ENST00000272395 GYS1P13807 737 aa10.71□□□□□ -0.69
TRIM43-201ENST00000272395 CCT4P50991 539 aaKnown RBP10.71□□□□□ -0.69
TRIM43-201ENST00000272395 COPS6Q7L5N1 327 aa10.71□□□□□ -0.69
TRIM43-201ENST00000272395 FAM43AQ8N2R8 423 aa10.71□□□□□ -0.69
TRIM43-201ENST00000272395 ZBTB3Q9H5J0 574 aa10.71□□□□□ -0.69
TRIM43-201ENST00000272395 BCL2L12Q9HB09 334 aa10.71□□□□□ -0.69
TRIM43-201ENST00000272395 SRCAPQ6ZRS2 3230 aa10.71□□□□□ -0.7
TRIM43-201ENST00000272395 A0A087WZG4 1122 aa10.7□□□□□ -0.7
TRIM43-201ENST00000272395 GOLGA6L3A6NEY3 463 aa10.7□□□□□ -0.7
TRIM43-201ENST00000272395 TRAK2O60296 914 aa10.7□□□□□ -0.7
TRIM43-201ENST00000272395 SLC4A2P04920 1241 aa10.7□□□□□ -0.7
TRIM43-201ENST00000272395 RABEP1Q15276 862 aa10.7□□□□□ -0.7
TRIM43-201ENST00000272395 HLFQ16534 295 aa10.7□□□□□ -0.7
TRIM43-201ENST00000272395 SKOR2Q2VWA4 1001 aaPredicted RBP10.7□□□□□ -0.7
TRIM43-201ENST00000272395 CEP85Q6P2H3 762 aa10.7□□□□□ -0.7
TRIM43-201ENST00000272395 CASC1Q6TDU7 716 aa10.7□□□□□ -0.7
TRIM43-201ENST00000272395 G2E3Q7L622 706 aa10.7□□□□□ -0.7
TRIM43-201ENST00000272395 SPRYD3Q8NCJ5 442 aa10.7□□□□□ -0.7
TRIM43-201ENST00000272395 STK31Q9BXU1 1019 aa10.7□□□□□ -0.7
TRIM43-201ENST00000272395 NARFQ9UHQ1 456 aa10.7□□□□□ -0.7
TRIM43-201ENST00000272395 RAB3GAP1Q15042 981 aa10.69□□□□□ -0.7
TRIM43-201ENST00000272395 KIF6Q6ZMV9 814 aa10.69□□□□□ -0.7
TRIM43-201ENST00000272395 BICDL1Q6ZP65 573 aa10.69□□□□□ -0.7
TRIM43-201ENST00000272395 MTFR1LQ9H019 292 aa10.69□□□□□ -0.7
TRIM43-201ENST00000272395 HYPKQ9NX55 129 aa10.69□□□□□ -0.7
TRIM43-201ENST00000272395 C4AP0C0L4 1744 aa10.69□□□□□ -0.7
TRIM43-201ENST00000272395 NPM3O75607 178 aaKnown RBP10.69□□□□□ -0.7
TRIM43-201ENST00000272395 GSPT1P15170 499 aaKnown RBP10.69□□□□□ -0.7
TRIM43-201ENST00000272395 CLEC17AQ6ZS10 378 aa10.69□□□□□ -0.7
TRIM43-201ENST00000272395 MAP3K15Q6ZN16 1313 aa10.69□□□□□ -0.7
TRIM43-201ENST00000272395 QSER1Q2KHR3 1735 aa10.68□□□□□ -0.7
TRIM43-201ENST00000272395 HSP90AA1P07900 732 aaKnown RBP10.68□□□□□ -0.7
TRIM43-201ENST00000272395 MMP10P09238 476 aa10.68□□□□□ -0.7
TRIM43-201ENST00000272395 PTGER2P43116 358 aa10.68□□□□□ -0.7
TRIM43-201ENST00000272395 TBC1D9BQ66K14 1250 aa10.68□□□□□ -0.7
TRIM43-201ENST00000272395 SLC16A10Q8TF71 515 aa10.68□□□□□ -0.7
TRIM43-201ENST00000272395 PXDNLA1KZ92 1463 aa10.68□□□□□ -0.7
TRIM43-201ENST00000272395 MRE11P49959 708 aa10.67□□□□□ -0.7
TRIM43-201ENST00000272395 DDR1Q08345 913 aa10.67□□□□□ -0.7
TRIM43-201ENST00000272395 NFIXQ14938 502 aa10.67□□□□□ -0.7
TRIM43-201ENST00000272395 OSBPL3Q9H4L5 887 aa10.67□□□□□ -0.7
TRIM43-201ENST00000272395 SPON1Q9HCB6 807 aa10.67□□□□□ -0.7
TRIM43-201ENST00000272395 REC8O95072 547 aa10.66□□□□□ -0.7
TRIM43-201ENST00000272395 FLIIQ13045 1269 aa10.66□□□□□ -0.7
TRIM43-201ENST00000272395 NLGN1Q8N2Q7 840 aa10.66□□□□□ -0.7
TRIM43-201ENST00000272395 TNPO1Q92973 898 aaKnown RBP10.66□□□□□ -0.7
TRIM43-201ENST00000272395 MEIS3Q99687 375 aa10.66□□□□□ -0.7
TRIM43-201ENST00000272395 SGIP1Q9BQI5 828 aa10.66□□□□□ -0.7
TRIM43-201ENST00000272395 USP26Q9BXU7 913 aa10.66□□□□□ -0.7
TRIM43-201ENST00000272395 CHMP4AQ9BY43 222 aa10.66□□□□□ -0.7
TRIM43-201ENST00000272395 AK9Q5TCS8 1911 aa10.66□□□□□ -0.7
TRIM43-201ENST00000272395 ERVV-1B6SEH8 477 aa10.66□□□□□ -0.7
TRIM43-201ENST00000272395 GNAI3P08754 354 aa10.66□□□□□ -0.7
TRIM43-201ENST00000272395 GPTP24298 496 aa10.66□□□□□ -0.7
TRIM43-201ENST00000272395 ANKRD13DQ6ZTN6 518 aa10.66□□□□□ -0.7
TRIM43-201ENST00000272395 PLBD2Q8NHP8 589 aa10.66□□□□□ -0.7
TRIM43-201ENST00000272395 SCN7AQ01118 1682 aa10.66□□□□□ -0.7
TRIM43-201ENST00000272395 ADCY9O60503 1353 aa10.65□□□□□ -0.7
TRIM43-201ENST00000272395 PI4KAP2A4QPH2 592 aa10.65□□□□□ -0.7
TRIM43-201ENST00000272395 FAM177BA6PVY3 158 aa10.65□□□□□ -0.7
TRIM43-201ENST00000272395 GOLGA6L22H0YM25 854 aa10.65□□□□□ -0.7
TRIM43-201ENST00000272395 SDSP20132 328 aa10.65□□□□□ -0.7
TRIM43-201ENST00000272395 TM4SF1P30408 202 aa10.65□□□□□ -0.7
TRIM43-201ENST00000272395 FKBP5Q13451 457 aaPredicted RBP10.65□□□□□ -0.7
TRIM43-201ENST00000272395 RIC3Q7Z5B4 369 aa10.65□□□□□ -0.7
TRIM43-201ENST00000272395 PI4KAP1Q8N8J0 262 aa10.65□□□□□ -0.7
TRIM43-201ENST00000272395 ZNF652Q9Y2D9 606 aa10.65□□□□□ -0.7
TRIM43-201ENST00000272395 MAP3K2Q9Y2U5 619 aa10.65□□□□□ -0.7
TRIM43-201ENST00000272395 UBN2Q6ZU65 1347 aa10.64□□□□□ -0.71
TRIM43-201ENST00000272395 F6X3S4 739 aa10.64□□□□□ -0.71
TRIM43-201ENST00000272395 ATP5J2-PTCD1G3V325 749 aa10.64□□□□□ -0.71
TRIM43-201ENST00000272395 POLRMTO00411 1230 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms