RNA–Protein interactions for RNA: ENST00000272238.8

ATP6V1C2-201, Transcript of ATPase H+ transporting V1 subunit C2, humanhuman

TSL 5 BASIC

Gene ATP6V1C2, Length 1,565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C2-201ENST00000272238 ST5P78524 1137 aa19.78■□□□□ 0.76
ATP6V1C2-201ENST00000272238 PARP10Q53GL7 1025 aa19.78■□□□□ 0.76
ATP6V1C2-201ENST00000272238 PXDNLA1KZ92 1463 aa19.78■□□□□ 0.76
ATP6V1C2-201ENST00000272238 CACNA1SQ13698 1873 aa19.77■□□□□ 0.76
ATP6V1C2-201ENST00000272238 NTSR2O95665 410 aa19.77■□□□□ 0.76
ATP6V1C2-201ENST00000272238 IGKV5-2P06315 115 aa19.77■□□□□ 0.76
ATP6V1C2-201ENST00000272238 PPP1R42Q7Z4L9 355 aa19.77■□□□□ 0.76
ATP6V1C2-201ENST00000272238 TRMT112Q9UI30 125 aaKnown RBP19.77■□□□□ 0.76
ATP6V1C2-201ENST00000272238 TNNQ9UQP3 1299 aa19.77■□□□□ 0.76
ATP6V1C2-201ENST00000272238 UTP14AQ9BVJ6 771 aaKnown RBP19.76■□□□□ 0.75
ATP6V1C2-201ENST00000272238 NYXQ9GZU5 481 aa19.76■□□□□ 0.75
ATP6V1C2-201ENST00000272238 IBTKQ9P2D0 1353 aaPredicted RBP19.76■□□□□ 0.75
ATP6V1C2-201ENST00000272238 BRPF1P55201 1214 aaPredicted RBP19.75■□□□□ 0.75
ATP6V1C2-201ENST00000272238 ERFEQ4G0M1 354 aa19.75■□□□□ 0.75
ATP6V1C2-201ENST00000272238 TPTE2Q6XPS3 522 aa19.75■□□□□ 0.75
ATP6V1C2-201ENST00000272238 JARID2Q92833 1246 aaPredicted RBP19.75■□□□□ 0.75
ATP6V1C2-201ENST00000272238 CLUAP1Q96AJ1 413 aa19.75■□□□□ 0.75
ATP6V1C2-201ENST00000272238 CWC25Q9NXE8 425 aaPredicted RBP19.75■□□□□ 0.75
ATP6V1C2-201ENST00000272238 NEURL1BA8MQ27 555 aa19.74■□□□□ 0.75
ATP6V1C2-201ENST00000272238 API5Q9BZZ5 524 aaKnown RBP19.74■□□□□ 0.75
ATP6V1C2-201ENST00000272238 WWC3Q9ULE0 1092 aa19.74■□□□□ 0.75
ATP6V1C2-201ENST00000272238 DLEC1Q9Y238 1755 aa19.74■□□□□ 0.75
ATP6V1C2-201ENST00000272238 TRIM27P14373 513 aa19.74■□□□□ 0.75
ATP6V1C2-201ENST00000272238 SYNE4Q8N205 404 aa19.74■□□□□ 0.75
ATP6V1C2-201ENST00000272238 NLGN2Q8NFZ4 835 aa19.74■□□□□ 0.75
ATP6V1C2-201ENST00000272238 LINS1Q8NG48 757 aa19.74■□□□□ 0.75
ATP6V1C2-201ENST00000272238 FAM89AQ96GI7 184 aa19.74■□□□□ 0.75
ATP6V1C2-201ENST00000272238 BEND3Q5T5X7 828 aa19.73■□□□□ 0.75
ATP6V1C2-201ENST00000272238 ZKSCAN2Q63HK3 967 aa19.73■□□□□ 0.75
ATP6V1C2-201ENST00000272238 ATF7IPQ6VMQ6 1270 aa19.73■□□□□ 0.75
ATP6V1C2-201ENST00000272238 CCDC191Q8NCU4 936 aa19.73■□□□□ 0.75
ATP6V1C2-201ENST00000272238 SRCIN1Q9C0H9 1055 aa19.73■□□□□ 0.75
ATP6V1C2-201ENST00000272238 SH3TC1Q8TE82 1336 aa19.72■□□□□ 0.75
ATP6V1C2-201ENST00000272238 IPO8O15397 1037 aaKnown RBP19.72■□□□□ 0.75
ATP6V1C2-201ENST00000272238 GOLGB1Q14789 3259 aaKnown RBP19.72■□□□□ 0.75
ATP6V1C2-201ENST00000272238 MYH3P11055 1940 aa19.72■□□□□ 0.75
ATP6V1C2-201ENST00000272238 PLIN1O60240 522 aa19.71■□□□□ 0.75
ATP6V1C2-201ENST00000272238 FTSJ3Q8IY81 847 aaKnown RBP19.71■□□□□ 0.75
ATP6V1C2-201ENST00000272238 BRCA1P38398 1863 aaKnown RBP19.71■□□□□ 0.75
ATP6V1C2-201ENST00000272238 HCLS1P14317 486 aaPredicted RBP19.7■□□□□ 0.74
ATP6V1C2-201ENST00000272238 CHRNA5P30532 468 aa19.7■□□□□ 0.74
ATP6V1C2-201ENST00000272238 TRIM28Q13263 835 aaKnown RBP19.7■□□□□ 0.74
ATP6V1C2-201ENST00000272238 GCKRQ14397 625 aa19.7■□□□□ 0.74
ATP6V1C2-201ENST00000272238 UBE3BQ7Z3V4 1068 aa19.7■□□□□ 0.74
ATP6V1C2-201ENST00000272238 SYT17Q9BSW7 474 aa19.7■□□□□ 0.74
ATP6V1C2-201ENST00000272238 CD2APQ9Y5K6 639 aa19.7■□□□□ 0.74
ATP6V1C2-201ENST00000272238 ABCC4O15439 1325 aa19.7■□□□□ 0.74
ATP6V1C2-201ENST00000272238 ARHGAP45Q92619 1136 aa19.7■□□□□ 0.74
ATP6V1C2-201ENST00000272238 RNF123Q5XPI4 1314 aa19.69■□□□□ 0.74
ATP6V1C2-201ENST00000272238 ZBTB38Q8NAP3 1195 aaPredicted RBP19.69■□□□□ 0.74
ATP6V1C2-201ENST00000272238 A0A0G2JLW4 131 aa19.68■□□□□ 0.74
ATP6V1C2-201ENST00000272238 C3orf67Q6ZVT6 689 aa19.68■□□□□ 0.74
ATP6V1C2-201ENST00000272238 BRIP1Q9BX63 1249 aa19.68■□□□□ 0.74
ATP6V1C2-201ENST00000272238 IRS4O14654 1257 aaPredicted RBP19.67■□□□□ 0.74
ATP6V1C2-201ENST00000272238 PCCAP05165 728 aaPredicted RBP19.67■□□□□ 0.74
ATP6V1C2-201ENST00000272238 DPEP1P16444 411 aa19.67■□□□□ 0.74
ATP6V1C2-201ENST00000272238 PDE6BP35913 854 aa19.67■□□□□ 0.74
ATP6V1C2-201ENST00000272238 C2CD5Q86YS7 1000 aa19.67■□□□□ 0.74
ATP6V1C2-201ENST00000272238 C9orf78Q9NZ63 289 aaPredicted RBP19.67■□□□□ 0.74
ATP6V1C2-201ENST00000272238 RIC1Q4ADV7 1423 aa19.67■□□□□ 0.74
ATP6V1C2-201ENST00000272238 ALDH1L1O75891 902 aa19.66■□□□□ 0.74
ATP6V1C2-201ENST00000272238 CCT4P50991 539 aaKnown RBP19.66■□□□□ 0.74
ATP6V1C2-201ENST00000272238 SPEF2Q9C093 1822 aa19.66■□□□□ 0.74
ATP6V1C2-201ENST00000272238 TAF1P21675 1872 aa19.66■□□□□ 0.74
ATP6V1C2-201ENST00000272238 GRM8O00222 908 aa19.66■□□□□ 0.74
ATP6V1C2-201ENST00000272238 RLBP1P12271 317 aa19.66■□□□□ 0.74
ATP6V1C2-201ENST00000272238 DZIP1LQ8IYY4 767 aaKnown RBP19.66■□□□□ 0.74
ATP6V1C2-201ENST00000272238 PELP1Q8IZL8 1130 aaKnown RBP19.66■□□□□ 0.74
ATP6V1C2-201ENST00000272238 TMEM57Q8N5G2 664 aa19.66■□□□□ 0.74
ATP6V1C2-201ENST00000272238 PANK1Q8TE04 598 aa19.66■□□□□ 0.74
ATP6V1C2-201ENST00000272238 H0YIN7 160 aa19.65■□□□□ 0.74
ATP6V1C2-201ENST00000272238 ITPRIPQ8IWB1 547 aa19.65■□□□□ 0.74
ATP6V1C2-201ENST00000272238 CCDC85AQ96PX6 553 aaPredicted RBP19.65■□□□□ 0.74
ATP6V1C2-201ENST00000272238 TGFB2P61812 414 aa19.64■□□□□ 0.73
ATP6V1C2-201ENST00000272238 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.64■□□□□ 0.73
ATP6V1C2-201ENST00000272238 ZNF622Q969S3 477 aaKnown RBP eCLIP19.64■□□□□ 0.73
ATP6V1C2-201ENST00000272238 NLRP3Q96P20 1036 aa19.64■□□□□ 0.73
ATP6V1C2-201ENST00000272238 CDHR2Q9BYE9 1310 aa19.64■□□□□ 0.73
ATP6V1C2-201ENST00000272238 NBPF7P0C2Y1 421 aaPredicted RBP19.63■□□□□ 0.73
ATP6V1C2-201ENST00000272238 RPGRQ92834 1020 aaKnown RBP19.63■□□□□ 0.73
ATP6V1C2-201ENST00000272238 H7C1W4 665 aa19.62■□□□□ 0.73
ATP6V1C2-201ENST00000272238 RRP1P56182 461 aaKnown RBP19.62■□□□□ 0.73
ATP6V1C2-201ENST00000272238 UTRNP46939 3433 aa19.62■□□□□ 0.73
ATP6V1C2-201ENST00000272238 COL4A1P02462 1669 aa19.62■□□□□ 0.73
ATP6V1C2-201ENST00000272238 C20orf194Q5TEA3 1177 aa19.61■□□□□ 0.73
ATP6V1C2-201ENST00000272238 INTS3Q68E01 1043 aaKnown RBP19.61■□□□□ 0.73
ATP6V1C2-201ENST00000272238 SRGNP10124 158 aa19.61■□□□□ 0.73
ATP6V1C2-201ENST00000272238 CASP7P55210 303 aa19.61■□□□□ 0.73
ATP6V1C2-201ENST00000272238 SLC10A5Q5PT55 438 aa19.61■□□□□ 0.73
ATP6V1C2-201ENST00000272238 MEIS3Q99687 375 aa19.61■□□□□ 0.73
ATP6V1C2-201ENST00000272238 SLX4Q8IY92 1834 aa19.6■□□□□ 0.73
ATP6V1C2-201ENST00000272238 PDE8AO60658 829 aa19.6■□□□□ 0.73
ATP6V1C2-201ENST00000272238 KCNA3P22001 575 aa19.6■□□□□ 0.73
ATP6V1C2-201ENST00000272238 CTSWP56202 376 aa19.6■□□□□ 0.73
ATP6V1C2-201ENST00000272238 MASTLQ96GX5 879 aa19.6■□□□□ 0.73
ATP6V1C2-201ENST00000272238 SUCLG2Q96I99 432 aa19.6■□□□□ 0.73
ATP6V1C2-201ENST00000272238 USP44Q9H0E7 712 aa19.6■□□□□ 0.73
ATP6V1C2-201ENST00000272238 CHMP3Q9Y3E7 222 aa19.6■□□□□ 0.73
ATP6V1C2-201ENST00000272238 ARFGEF1Q9Y6D6 1849 aa19.6■□□□□ 0.73
ATP6V1C2-201ENST00000272238 UBTFL1P0CB47 393 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms