RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 FAM182BQ5T319 152 aa14.95□□□□□ -0.02
SDE2-201ENST00000272091 CRKLP46109 303 aaKnown RBP14.95□□□□□ -0.02
SDE2-201ENST00000272091 KIF6Q6ZMV9 814 aa14.95□□□□□ -0.02
SDE2-201ENST00000272091 IL6STP40189 918 aaPredicted RBP14.94□□□□□ -0.02
SDE2-201ENST00000272091 TRIM28Q13263 835 aaKnown RBP14.94□□□□□ -0.02
SDE2-201ENST00000272091 GIGYF2Q6Y7W6 1299 aaKnown RBP14.94□□□□□ -0.02
SDE2-201ENST00000272091 PI4K2BQ8TCG2 481 aa14.94□□□□□ -0.02
SDE2-201ENST00000272091 BRWD3Q6RI45 1802 aa14.94□□□□□ -0.02
SDE2-201ENST00000272091 ONECUT3O60422 494 aaPredicted RBP14.94□□□□□ -0.02
SDE2-201ENST00000272091 EIF5P55010 431 aaKnown RBP14.94□□□□□ -0.02
SDE2-201ENST00000272091 PTPN12Q05209 780 aaKnown RBP14.94□□□□□ -0.02
SDE2-201ENST00000272091 HSP90AB4PQ58FF6 505 aa14.94□□□□□ -0.02
SDE2-201ENST00000272091 RTL5Q5HYW3 569 aaPredicted RBP14.94□□□□□ -0.02
SDE2-201ENST00000272091 AOX1Q06278 1338 aa14.94□□□□□ -0.02
SDE2-201ENST00000272091 USP42Q9H9J4 1324 aaKnown RBP14.94□□□□□ -0.02
SDE2-201ENST00000272091 CCDC87Q9NVE4 849 aa14.93□□□□□ -0.02
SDE2-201ENST00000272091 TAF1LQ8IZX4 1826 aa14.93□□□□□ -0.02
SDE2-201ENST00000272091 COPRSQ9NQ92 184 aa14.93□□□□□ -0.02
SDE2-201ENST00000272091 SIL1Q9H173 461 aa14.92□□□□□ -0.02
SDE2-201ENST00000272091 MYH3P11055 1940 aa14.92□□□□□ -0.02
SDE2-201ENST00000272091 LMBR1LQ6UX01 489 aa14.92□□□□□ -0.02
SDE2-201ENST00000272091 C22orf23Q9BZE7 217 aa14.92□□□□□ -0.02
SDE2-201ENST00000272091 LINC00116Q8NCU8 138 aa14.92□□□□□ -0.02
SDE2-201ENST00000272091 TBC1D2BQ9UPU7 963 aa14.92□□□□□ -0.02
SDE2-201ENST00000272091 OS9Q13438 667 aaPredicted RBP14.91□□□□□ -0.02
SDE2-201ENST00000272091 DZIP3Q86Y13 1208 aaKnown RBP14.91□□□□□ -0.02
SDE2-201ENST00000272091 SYNE4Q8N205 404 aa14.91□□□□□ -0.02
SDE2-201ENST00000272091 SMARCC1Q92922 1105 aaPredicted RBP14.91□□□□□ -0.02
SDE2-201ENST00000272091 UBN2Q6ZU65 1347 aa14.91□□□□□ -0.02
SDE2-201ENST00000272091 KCNQ4P56696 695 aa14.91□□□□□ -0.02
SDE2-201ENST00000272091 NLRP10Q86W26 655 aa14.91□□□□□ -0.02
SDE2-201ENST00000272091 ERC1Q8IUD2 1116 aa14.91□□□□□ -0.02
SDE2-201ENST00000272091 ERVV-1B6SEH8 477 aa14.91□□□□□ -0.02
SDE2-201ENST00000272091 DDRGK1Q96HY6 314 aa14.91□□□□□ -0.02
SDE2-201ENST00000272091 UPF2Q9HAU5 1272 aaKnown RBP14.91□□□□□ -0.02
SDE2-201ENST00000272091 DDX60Q8IY21 1712 aaKnown RBP14.9□□□□□ -0.02
SDE2-201ENST00000272091 PCCAP05165 728 aaPredicted RBP14.9□□□□□ -0.02
SDE2-201ENST00000272091 EAF2Q96CJ1 260 aaPredicted RBP14.9□□□□□ -0.02
SDE2-201ENST00000272091 TRPC5Q9UL62 973 aaPredicted RBP14.9□□□□□ -0.02
SDE2-201ENST00000272091 SCN7AQ01118 1682 aa14.9□□□□□ -0.02
SDE2-201ENST00000272091 RBM25P49756 843 aaKnown RBP14.9□□□□□ -0.02
SDE2-201ENST00000272091 GPTP24298 496 aa14.9□□□□□ -0.02
SDE2-201ENST00000272091 SLC4A3P48751 1232 aa14.9□□□□□ -0.02
SDE2-201ENST00000272091 TLR7Q9NYK1 1049 aaKnown RBP14.9□□□□□ -0.02
SDE2-201ENST00000272091 G3BP1Q13283 466 aaKnown RBP eCLIP14.89□□□□□ -0.038e-8■■□□□ 11.6
SDE2-201ENST00000272091 ZNF34Q8IZ26 560 aa14.89□□□□□ -0.03
SDE2-201ENST00000272091 FAM89AQ96GI7 184 aa14.89□□□□□ -0.03
SDE2-201ENST00000272091 CAMTA2O94983 1202 aa14.89□□□□□ -0.03
SDE2-201ENST00000272091 ZBTB38Q8NAP3 1195 aaPredicted RBP14.89□□□□□ -0.03
SDE2-201ENST00000272091 ARXQ96QS3 562 aa14.89□□□□□ -0.03
SDE2-201ENST00000272091 LAMB2P55268 1798 aa14.89□□□□□ -0.03
SDE2-201ENST00000272091 CASZ1Q86V15 1759 aa14.89□□□□□ -0.03
SDE2-201ENST00000272091 SEPT12Q8IYM1 358 aa14.89□□□□□ -0.03
SDE2-201ENST00000272091 KIF2CQ99661 725 aa14.89□□□□□ -0.03
SDE2-201ENST00000272091 PLA2G12BQ9BX93 195 aa14.89□□□□□ -0.03
SDE2-201ENST00000272091 ATG9AQ7Z3C6 839 aa14.88□□□□□ -0.03
SDE2-201ENST00000272091 CLASRPQ8N2M8 674 aaKnown RBP14.88□□□□□ -0.03
SDE2-201ENST00000272091 TTC41PQ6P2S7 1318 aa14.88□□□□□ -0.03
SDE2-201ENST00000272091 CDHR2Q9BYE9 1310 aa14.88□□□□□ -0.03
SDE2-201ENST00000272091 AACSQ86V21 672 aa14.88□□□□□ -0.03
SDE2-201ENST00000272091 MAP4K4O95819 1239 aaPredicted RBP14.87□□□□□ -0.03
SDE2-201ENST00000272091 QTRT2Q9H974 415 aaKnown RBP14.87□□□□□ -0.03
SDE2-201ENST00000272091 TFCP2Q12800 502 aa14.87□□□□□ -0.03
SDE2-201ENST00000272091 HSP90AB3PQ58FF7 597 aa14.87□□□□□ -0.03
SDE2-201ENST00000272091 ZNF594Q96JF6 807 aaPredicted RBP14.86□□□□□ -0.03
SDE2-201ENST00000272091 CSF1RP07333 972 aa14.86□□□□□ -0.03
SDE2-201ENST00000272091 CCDC8Q9H0W5 538 aaPredicted RBP14.86□□□□□ -0.03
SDE2-201ENST00000272091 CHMLP26374 656 aa14.86□□□□□ -0.03
SDE2-201ENST00000272091 IL25Q9H293 177 aa14.86□□□□□ -0.03
SDE2-201ENST00000272091 C4AP0C0L4 1744 aa14.86□□□□□ -0.03
SDE2-201ENST00000272091 C4BP0C0L5 1744 aa14.86□□□□□ -0.03
SDE2-201ENST00000272091 CNTNAP4Q9C0A0 1308 aa14.86□□□□□ -0.03
SDE2-201ENST00000272091 SMIM5Q71RC9 77 aa14.85□□□□□ -0.03
SDE2-201ENST00000272091 CHMP3Q9Y3E7 222 aa14.85□□□□□ -0.03
SDE2-201ENST00000272091 LRP5O75197 1615 aa14.85□□□□□ -0.03
SDE2-201ENST00000272091 RILPL2Q969X0 211 aa14.85□□□□□ -0.03
SDE2-201ENST00000272091 USP26Q9BXU7 913 aa14.85□□□□□ -0.03
SDE2-201ENST00000272091 TRIM6-TRIM34B2RNG4 842 aa14.85□□□□□ -0.03
SDE2-201ENST00000272091 ECHDC1Q9NTX5 307 aa14.85□□□□□ -0.03
SDE2-201ENST00000272091 IFIT2P09913 472 aaKnown RBP14.84□□□□□ -0.03
SDE2-201ENST00000272091 LRRC24Q50LG9 513 aa14.84□□□□□ -0.03
SDE2-201ENST00000272091 TNNI3KQ59H18 835 aa14.84□□□□□ -0.03
SDE2-201ENST00000272091 PUS3Q9BZE2 481 aaKnown RBP14.84□□□□□ -0.03
SDE2-201ENST00000272091 FPGT-TNNI3KV9GXZ4 949 aa14.84□□□□□ -0.03
SDE2-201ENST00000272091 SUSD4Q5VX71 490 aa14.84□□□□□ -0.03
SDE2-201ENST00000272091 AMIGO3Q86WK7 504 aa14.84□□□□□ -0.03
SDE2-201ENST00000272091 EP400Q96L91 3159 aa14.84□□□□□ -0.03
SDE2-201ENST00000272091 ESYT1Q9BSJ8 1104 aa14.83□□□□□ -0.03
SDE2-201ENST00000272091 DBNLQ9UJU6 430 aaKnown RBP14.83□□□□□ -0.03
SDE2-201ENST00000272091 COL4A1P02462 1669 aa14.83□□□□□ -0.04
SDE2-201ENST00000272091 COL24A1Q17RW2 1714 aa14.83□□□□□ -0.04
SDE2-201ENST00000272091 GLRX3O76003 335 aaKnown RBP14.83□□□□□ -0.04
SDE2-201ENST00000272091 ZNF609O15014 1411 aa14.83□□□□□ -0.04
SDE2-201ENST00000272091 TTLL11Q8NHH1 800 aa14.83□□□□□ -0.04
SDE2-201ENST00000272091 CCDC85AQ96PX6 553 aaPredicted RBP14.83□□□□□ -0.04
SDE2-201ENST00000272091 TBC1D2Q9BYX2 928 aa14.82□□□□□ -0.04
SDE2-201ENST00000272091 TRMT112Q9UI30 125 aaKnown RBP14.82□□□□□ -0.04
SDE2-201ENST00000272091 RIC1Q4ADV7 1423 aa14.82□□□□□ -0.04
SDE2-201ENST00000272091 SPEF2Q9C093 1822 aa14.82□□□□□ -0.04
SDE2-201ENST00000272091 EYA2O00167 538 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms