RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 BMS1Q14692 1282 aaKnown RBP13.46□□□□□ -0.25
VPS33A-201ENST00000267199 CPA1P15085 419 aa13.46□□□□□ -0.26
VPS33A-201ENST00000267199 LMAN1P49257 510 aa13.46□□□□□ -0.26
VPS33A-201ENST00000267199 PLEKHF1Q96S99 279 aa13.46□□□□□ -0.26
VPS33A-201ENST00000267199 RBM8AQ9Y5S9 174 aaKnown RBP13.46□□□□□ -0.26
VPS33A-201ENST00000267199 SYNMO15061 1565 aa13.46□□□□□ -0.26
VPS33A-201ENST00000267199 DHX8Q14562 1220 aaKnown RBP13.46□□□□□ -0.26
VPS33A-201ENST00000267199 IMMTQ16891 758 aaKnown RBP13.46□□□□□ -0.26
VPS33A-201ENST00000267199 HSP90AB3PQ58FF7 597 aa13.46□□□□□ -0.26
VPS33A-201ENST00000267199 KLHL10Q6JEL2 608 aa13.46□□□□□ -0.26
VPS33A-201ENST00000267199 AMOTL1Q8IY63 956 aa13.46□□□□□ -0.26
VPS33A-201ENST00000267199 ANTXR1Q9H6X2 564 aa13.46□□□□□ -0.26
VPS33A-201ENST00000267199 TTC37Q6PGP7 1564 aa13.45□□□□□ -0.26
VPS33A-201ENST00000267199 G3V3G9 751 aa13.45□□□□□ -0.26
VPS33A-201ENST00000267199 RIOK3O14730 519 aaKnown RBP13.45□□□□□ -0.26
VPS33A-201ENST00000267199 DCAF8Q5TAQ9 597 aa13.45□□□□□ -0.26
VPS33A-201ENST00000267199 CPLX3Q8WVH0 158 aa13.45□□□□□ -0.26
VPS33A-201ENST00000267199 TYRO3Q06418 890 aa13.45□□□□□ -0.26
VPS33A-201ENST00000267199 DEF6Q9H4E7 631 aa13.45□□□□□ -0.26
VPS33A-201ENST00000267199 SOS1Q07889 1333 aaPredicted RBP13.45□□□□□ -0.26
VPS33A-201ENST00000267199 KIF4BQ2VIQ3 1234 aa13.45□□□□□ -0.26
VPS33A-201ENST00000267199 TRIM22Q8IYM9 498 aa13.45□□□□□ -0.26
VPS33A-201ENST00000267199 NEMFO60524 1076 aa13.44□□□□□ -0.26
VPS33A-201ENST00000267199 CCAR1Q8IX12 1150 aaKnown RBP13.44□□□□□ -0.26
VPS33A-201ENST00000267199 CENPHQ9H3R5 247 aa13.44□□□□□ -0.26
VPS33A-201ENST00000267199 BRMS1Q9HCU9 246 aa13.44□□□□□ -0.26
VPS33A-201ENST00000267199 EDC4Q6P2E9 1401 aaKnown RBP13.44□□□□□ -0.26
VPS33A-201ENST00000267199 GADD45BO75293 160 aaPredicted RBP13.44□□□□□ -0.26
VPS33A-201ENST00000267199 AK2P54819 239 aa13.44□□□□□ -0.26
VPS33A-201ENST00000267199 STX1AQ16623 288 aa13.44□□□□□ -0.26
VPS33A-201ENST00000267199 HSP90AA4PQ58FG1 418 aa13.44□□□□□ -0.26
VPS33A-201ENST00000267199 ANKRD24Q8TF21 1146 aa13.44□□□□□ -0.26
VPS33A-201ENST00000267199 LRRC2Q9BYS8 371 aa13.44□□□□□ -0.26
VPS33A-201ENST00000267199 GOLIM4O00461 696 aa13.44□□□□□ -0.26
VPS33A-201ENST00000267199 ZSCAN12O43309 604 aa13.44□□□□□ -0.26
VPS33A-201ENST00000267199 MYRIPQ8NFW9 859 aa13.44□□□□□ -0.26
VPS33A-201ENST00000267199 DNAI1Q9UI46 699 aa13.44□□□□□ -0.26
VPS33A-201ENST00000267199 EPB41L2O43491 1005 aaKnown RBP13.44□□□□□ -0.26
VPS33A-201ENST00000267199 GSPT1P15170 499 aaKnown RBP13.44□□□□□ -0.26
VPS33A-201ENST00000267199 SLC39A6Q13433 755 aa13.44□□□□□ -0.26
VPS33A-201ENST00000267199 NUP133Q8WUM0 1156 aa13.44□□□□□ -0.26
VPS33A-201ENST00000267199 LRRC59Q96AG4 307 aaKnown RBP13.44□□□□□ -0.26
VPS33A-201ENST00000267199 NEK1Q96PY6 1258 aa13.44□□□□□ -0.26
VPS33A-201ENST00000267199 TMX4Q9H1E5 349 aaPredicted RBP13.44□□□□□ -0.26
VPS33A-201ENST00000267199 DDX46Q7L014 1031 aaKnown RBP13.43□□□□□ -0.26
VPS33A-201ENST00000267199 RAB11FIP4Q86YS3 637 aa13.43□□□□□ -0.26
VPS33A-201ENST00000267199 TRPM2O94759 1503 aa13.43□□□□□ -0.26
VPS33A-201ENST00000267199 GRM8O00222 908 aa13.43□□□□□ -0.26
VPS33A-201ENST00000267199 RAD21O60216 631 aa13.43□□□□□ -0.26
VPS33A-201ENST00000267199 CASQ1P31415 396 aa13.43□□□□□ -0.26
VPS33A-201ENST00000267199 JAKMIP3Q5VZ66 844 aa13.43□□□□□ -0.26
VPS33A-201ENST00000267199 MPHOSPH8Q99549 860 aa13.43□□□□□ -0.26
VPS33A-201ENST00000267199 ZBTB3Q9H5J0 574 aa13.43□□□□□ -0.26
VPS33A-201ENST00000267199 SNRKQ9NRH2 765 aa13.43□□□□□ -0.26
VPS33A-201ENST00000267199 ABCC4O15439 1325 aa13.43□□□□□ -0.26
VPS33A-201ENST00000267199 POLR3DP05423 398 aaPredicted RBP13.43□□□□□ -0.26
VPS33A-201ENST00000267199 SYT1P21579 422 aa13.43□□□□□ -0.26
VPS33A-201ENST00000267199 CWF19L2Q2TBE0 894 aaKnown RBP13.43□□□□□ -0.26
VPS33A-201ENST00000267199 METTL24Q5JXM2 366 aa13.43□□□□□ -0.26
VPS33A-201ENST00000267199 ZSCAN25Q6NSZ9 544 aa13.43□□□□□ -0.26
VPS33A-201ENST00000267199 FAM173BQ6P4H8 233 aa13.43□□□□□ -0.26
VPS33A-201ENST00000267199 INTS4Q96HW7 963 aaKnown RBP13.43□□□□□ -0.26
VPS33A-201ENST00000267199 PNMA6EA0A0J9YXQ4 647 aa13.42□□□□□ -0.26
VPS33A-201ENST00000267199 CCDC69A6NI79 296 aa13.42□□□□□ -0.26
VPS33A-201ENST00000267199 KIAA0754O94854 1291 aa13.42□□□□□ -0.26
VPS33A-201ENST00000267199 GSDMDP57764 484 aa13.42□□□□□ -0.26
VPS33A-201ENST00000267199 GNG11P61952 73 aa13.42□□□□□ -0.26
VPS33A-201ENST00000267199 KSR2Q6VAB6 950 aa13.42□□□□□ -0.26
VPS33A-201ENST00000267199 PIBF1Q8WXW3 757 aa13.42□□□□□ -0.26
VPS33A-201ENST00000267199 BRF1Q92994 677 aa13.42□□□□□ -0.26
VPS33A-201ENST00000267199 C8orf76Q96K31 380 aa13.42□□□□□ -0.26
VPS33A-201ENST00000267199 NACAP1Q9BZK3 213 aa13.42□□□□□ -0.26
VPS33A-201ENST00000267199 CDC42BPAQ5VT25 1732 aa13.42□□□□□ -0.26
VPS33A-201ENST00000267199 SLC3A2P08195 630 aaKnown RBP13.42□□□□□ -0.26
VPS33A-201ENST00000267199 PPP1R9BQ96SB3 815 aa13.42□□□□□ -0.26
VPS33A-201ENST00000267199 CTAGE5O15320 804 aa13.42□□□□□ -0.26
VPS33A-201ENST00000267199 HMGB1P09429 215 aaKnown RBP13.42□□□□□ -0.26
VPS33A-201ENST00000267199 ANKRD13DQ6ZTN6 518 aa13.42□□□□□ -0.26
VPS33A-201ENST00000267199 COPS6Q7L5N1 327 aa13.42□□□□□ -0.26
VPS33A-201ENST00000267199 ALDH1L1O75891 902 aa13.42□□□□□ -0.26
VPS33A-201ENST00000267199 CDKL5O76039 1030 aa13.42□□□□□ -0.26
VPS33A-201ENST00000267199 CD2BP2O95400 341 aaKnown RBP13.42□□□□□ -0.26
VPS33A-201ENST00000267199 XAGE3Q8WTP9 111 aa13.42□□□□□ -0.26
VPS33A-201ENST00000267199 PREX2Q70Z35 1606 aa13.42□□□□□ -0.26
VPS33A-201ENST00000267199 PLCD3Q8N3E9 789 aa13.41□□□□□ -0.26
VPS33A-201ENST00000267199 DACH1Q9UI36 760 aa13.41□□□□□ -0.26
VPS33A-201ENST00000267199 CCDC82Q8N4S0 544 aa13.41□□□□□ -0.26
VPS33A-201ENST00000267199 CCDC171Q6TFL3 1326 aa13.41□□□□□ -0.26
VPS33A-201ENST00000267199 KRT28Q7Z3Y7 464 aa13.41□□□□□ -0.26
VPS33A-201ENST00000267199 GTF3C6Q969F1 213 aa13.41□□□□□ -0.26
VPS33A-201ENST00000267199 RNF216Q9NWF9 866 aaPredicted RBP13.41□□□□□ -0.26
VPS33A-201ENST00000267199 ZNHIT6Q9NWK9 470 aaKnown RBP13.41□□□□□ -0.26
VPS33A-201ENST00000267199 SLU7O95391 586 aaKnown RBP13.4□□□□□ -0.26
VPS33A-201ENST00000267199 PIP4K2AP48426 406 aaPredicted RBP13.4□□□□□ -0.26
VPS33A-201ENST00000267199 TDO2P48775 406 aa13.4□□□□□ -0.26
VPS33A-201ENST00000267199 HMG20BQ9P0W2 317 aa13.4□□□□□ -0.26
VPS33A-201ENST00000267199 ZMYM3Q14202 1370 aa13.4□□□□□ -0.26
VPS33A-201ENST00000267199 MAP3K5Q99683 1374 aa13.4□□□□□ -0.26
VPS33A-201ENST00000267199 HAND2P61296 217 aa13.4□□□□□ -0.26
VPS33A-201ENST00000267199 AOPEPQ8N6M6 819 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms