RNA–Protein interactions for RNA: ENST00000267064.8

SMARCC2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-201ENST00000267064 KAZALD1Q96I82 304 aa22.54■■□□□ 1.2
SMARCC2-201ENST00000267064 STAP2Q9UGK3 403 aa22.54■■□□□ 1.2
SMARCC2-201ENST00000267064 COL5A2P05997 1499 aaPredicted RBP22.54■■□□□ 1.2
SMARCC2-201ENST00000267064 OVOS2A0A0G2JMS6 1433 aa22.54■■□□□ 1.2
SMARCC2-201ENST00000267064 CCDC191Q8NCU4 936 aa22.54■■□□□ 1.2
SMARCC2-201ENST00000267064 MCM4P33991 863 aa22.53■■□□□ 1.2
SMARCC2-201ENST00000267064 TCEANC2Q96MN5 208 aa22.53■■□□□ 1.2
SMARCC2-201ENST00000267064 TTC41PQ6P2S7 1318 aa22.53■■□□□ 1.2
SMARCC2-201ENST00000267064 MCTP1Q6DN14 999 aa22.53■■□□□ 1.2
SMARCC2-201ENST00000267064 NMIQ13287 307 aaPredicted RBP22.53■■□□□ 1.2
SMARCC2-201ENST00000267064 HELBQ8NG08 1087 aaPredicted RBP22.53■■□□□ 1.2
SMARCC2-201ENST00000267064 SNX21Q969T3 373 aa22.53■■□□□ 1.2
SMARCC2-201ENST00000267064 TCIRG1Q13488 830 aa22.52■■□□□ 1.2
SMARCC2-201ENST00000267064 IFIT1P09914 478 aaKnown RBP22.52■■□□□ 1.2
SMARCC2-201ENST00000267064 LRRC24Q50LG9 513 aa22.52■■□□□ 1.2
SMARCC2-201ENST00000267064 TNNI3KQ59H18 835 aa22.52■■□□□ 1.2
SMARCC2-201ENST00000267064 CCDC158Q5M9N0 1113 aa22.52■■□□□ 1.2
SMARCC2-201ENST00000267064 ZGPATQ8N5A5 531 aaKnown RBP22.52■■□□□ 1.2
SMARCC2-201ENST00000267064 FPGT-TNNI3KV9GXZ4 949 aa22.52■■□□□ 1.2
SMARCC2-201ENST00000267064 PI4K2BQ8TCG2 481 aa22.52■■□□□ 1.2
SMARCC2-201ENST00000267064 PUS3Q9BZE2 481 aaKnown RBP22.52■■□□□ 1.19
SMARCC2-201ENST00000267064 HCLS1P14317 486 aaPredicted RBP22.51■■□□□ 1.19
SMARCC2-201ENST00000267064 TNPO1Q92973 898 aaKnown RBP22.51■■□□□ 1.19
SMARCC2-201ENST00000267064 HLFQ16534 295 aa22.51■■□□□ 1.19
SMARCC2-201ENST00000267064 PTPN12Q05209 780 aaKnown RBP22.5■■□□□ 1.19
SMARCC2-201ENST00000267064 MPHOSPH8Q99549 860 aa22.5■■□□□ 1.19
SMARCC2-201ENST00000267064 RNF20Q5VTR2 975 aa22.5■■□□□ 1.19
SMARCC2-201ENST00000267064 HIP1O00291 1037 aa22.5■■□□□ 1.19
SMARCC2-201ENST00000267064 IRS4O14654 1257 aaPredicted RBP22.5■■□□□ 1.19
SMARCC2-201ENST00000267064 DDX49Q9Y6V7 483 aaKnown RBP22.5■■□□□ 1.19
SMARCC2-201ENST00000267064 TRAK2O60296 914 aa22.49■■□□□ 1.19
SMARCC2-201ENST00000267064 APPP05067 770 aa22.49■■□□□ 1.19
SMARCC2-201ENST00000267064 MTX1Q13505 466 aa22.49■■□□□ 1.19
SMARCC2-201ENST00000267064 KIF2CQ99661 725 aa22.49■■□□□ 1.19
SMARCC2-201ENST00000267064 KCNQ2O43526 872 aa22.49■■□□□ 1.19
SMARCC2-201ENST00000267064 DDX11L8A8MPP1 907 aa22.48■■□□□ 1.19
SMARCC2-201ENST00000267064 SGSM2O43147 1006 aa22.48■■□□□ 1.19
SMARCC2-201ENST00000267064 HSP90AB3PQ58FF7 597 aa22.48■■□□□ 1.19
SMARCC2-201ENST00000267064 STK3Q13188 491 aa22.48■■□□□ 1.19
SMARCC2-201ENST00000267064 RTN4Q9NQC3 1192 aaKnown RBP22.48■■□□□ 1.19
SMARCC2-201ENST00000267064 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.48■■□□□ 1.19
SMARCC2-201ENST00000267064 TMX3Q96JJ7 454 aa22.48■■□□□ 1.19
SMARCC2-201ENST00000267064 DBNLQ9UJU6 430 aaKnown RBP22.48■■□□□ 1.19
SMARCC2-201ENST00000267064 NIP7Q9Y221 180 aaKnown RBP eCLIP22.47■■□□□ 1.19
SMARCC2-201ENST00000267064 ANKRD18BA2A2Z9 1011 aa22.47■■□□□ 1.19
SMARCC2-201ENST00000267064 IL15P40933 162 aaPredicted RBP22.47■■□□□ 1.19
SMARCC2-201ENST00000267064 RGPD5Q99666 1765 aa22.47■■□□□ 1.19
SMARCC2-201ENST00000267064 ERBB4Q15303 1308 aa22.47■■□□□ 1.19
SMARCC2-201ENST00000267064 CCDC129Q6ZRS4 1044 aa22.47■■□□□ 1.19
SMARCC2-201ENST00000267064 IL25Q9H293 177 aa22.47■■□□□ 1.19
SMARCC2-201ENST00000267064 NUCB2P80303 420 aa22.47■■□□□ 1.19
SMARCC2-201ENST00000267064 SMIM5Q71RC9 77 aa22.47■■□□□ 1.19
SMARCC2-201ENST00000267064 CYP46A1Q9Y6A2 500 aa22.47■■□□□ 1.19
SMARCC2-201ENST00000267064 EYA2O00167 538 aa22.46■■□□□ 1.19
SMARCC2-201ENST00000267064 A0A1B0GUL7 405 aa22.46■■□□□ 1.19
SMARCC2-201ENST00000267064 COPRSQ9NQ92 184 aa22.46■■□□□ 1.19
SMARCC2-201ENST00000267064 RBM8AQ9Y5S9 174 aaKnown RBP22.46■■□□□ 1.19
SMARCC2-201ENST00000267064 NKX1-1Q15270 411 aaPredicted RBP22.45■■□□□ 1.18
SMARCC2-201ENST00000267064 CCDC24Q8N4L8 307 aa22.45■■□□□ 1.18
SMARCC2-201ENST00000267064 LOC102724428A0A0B4J2F2 783 aa22.45■■□□□ 1.18
SMARCC2-201ENST00000267064 PHF14O94880 888 aa22.45■■□□□ 1.18
SMARCC2-201ENST00000267064 SIK1P57059 783 aa22.45■■□□□ 1.18
SMARCC2-201ENST00000267064 PTH1RQ03431 593 aa22.45■■□□□ 1.18
SMARCC2-201ENST00000267064 SMC3Q9UQE7 1217 aa22.45■■□□□ 1.18
SMARCC2-201ENST00000267064 FOSBP53539 338 aa22.45■■□□□ 1.18
SMARCC2-201ENST00000267064 PDRG1Q9NUG6 133 aa22.45■■□□□ 1.18
SMARCC2-201ENST00000267064 IDH1O75874 414 aaKnown RBP22.44■■□□□ 1.18
SMARCC2-201ENST00000267064 USP21Q9UK80 565 aa22.44■■□□□ 1.18
SMARCC2-201ENST00000267064 AOX1Q06278 1338 aa22.44■■□□□ 1.18
SMARCC2-201ENST00000267064 VPS37CA5D8V6 355 aaPredicted RBP22.44■■□□□ 1.18
SMARCC2-201ENST00000267064 ITGA6P23229 1130 aa22.44■■□□□ 1.18
SMARCC2-201ENST00000267064 STRCP1A6NGW2 1772 aa22.43■■□□□ 1.18
SMARCC2-201ENST00000267064 H7C1W4 665 aa22.43■■□□□ 1.18
SMARCC2-201ENST00000267064 CDCA7Q9BWT1 371 aaPredicted RBP22.43■■□□□ 1.18
SMARCC2-201ENST00000267064 PXDNLA1KZ92 1463 aa22.43■■□□□ 1.18
SMARCC2-201ENST00000267064 ANTXR1Q9H6X2 564 aa22.43■■□□□ 1.18
SMARCC2-201ENST00000267064 CCDC87Q9NVE4 849 aa22.43■■□□□ 1.18
SMARCC2-201ENST00000267064 MCM2P49736 904 aa22.43■■□□□ 1.18
SMARCC2-201ENST00000267064 SEC62Q99442 399 aaKnown RBP22.43■■□□□ 1.18
SMARCC2-201ENST00000267064 TOMM22Q9NS69 142 aa22.43■■□□□ 1.18
SMARCC2-201ENST00000267064 MAP3K15Q6ZN16 1313 aa22.43■■□□□ 1.18
SMARCC2-201ENST00000267064 GIGYF2Q6Y7W6 1299 aaKnown RBP22.42■■□□□ 1.18
SMARCC2-201ENST00000267064 A0A0D9SFI3 127 aa22.42■■□□□ 1.18
SMARCC2-201ENST00000267064 CRKLP46109 303 aaKnown RBP22.42■■□□□ 1.18
SMARCC2-201ENST00000267064 BLOC1S2Q6QNY1 142 aa22.42■■□□□ 1.18
SMARCC2-201ENST00000267064 CCDC83Q8IWF9 413 aa22.42■■□□□ 1.18
SMARCC2-201ENST00000267064 STK11IPQ8N1F8 1099 aa22.41■■□□□ 1.18
SMARCC2-201ENST00000267064 MARCH10Q8NA82 808 aaPredicted RBP22.41■■□□□ 1.18
SMARCC2-201ENST00000267064 IQSEC3Q9UPP2 1182 aaPredicted RBP22.41■■□□□ 1.18
SMARCC2-201ENST00000267064 AKAP2Q9Y2D5 859 aa22.41■■□□□ 1.18
SMARCC2-201ENST00000267064 PRPF40AO75400 957 aaKnown RBP22.41■■□□□ 1.18
SMARCC2-201ENST00000267064 SLFNL1Q499Z3 407 aa22.41■■□□□ 1.18
SMARCC2-201ENST00000267064 VPS37DQ86XT2 251 aa22.41■■□□□ 1.18
SMARCC2-201ENST00000267064 RASEFQ8IZ41 740 aa22.41■■□□□ 1.18
SMARCC2-201ENST00000267064 CIZ1Q9ULV3 898 aaPredicted RBP22.41■■□□□ 1.18
SMARCC2-201ENST00000267064 CHGBP05060 677 aa22.41■■□□□ 1.18
SMARCC2-201ENST00000267064 ATP2B3Q16720 1220 aa22.41■■□□□ 1.18
SMARCC2-201ENST00000267064 GREM2Q9H772 168 aa22.41■■□□□ 1.18
SMARCC2-201ENST00000267064 CYP19A1P11511 503 aaPredicted RBP22.4■■□□□ 1.18
SMARCC2-201ENST00000267064 PAG1Q9NWQ8 432 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms