RNA–Protein interactions for RNA: ENST00000265993.13

TCTN3-201, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-201ENST00000265993 ATF3P18847 181 aa13.08□□□□□ -0.32
TCTN3-201ENST00000265993 ERC1Q8IUD2 1116 aa13.08□□□□□ -0.32
TCTN3-201ENST00000265993 GPATCH3Q96I76 525 aa13.08□□□□□ -0.32
TCTN3-201ENST00000265993 PPP1R9BQ96SB3 815 aa13.08□□□□□ -0.32
TCTN3-201ENST00000265993 RBM8AQ9Y5S9 174 aaKnown RBP13.08□□□□□ -0.32
TCTN3-201ENST00000265993 NEXNQ0ZGT2 675 aa13.08□□□□□ -0.32
TCTN3-201ENST00000265993 LRSAM1Q6UWE0 723 aa13.08□□□□□ -0.32
TCTN3-201ENST00000265993 EVI5LQ96CN4 794 aa13.08□□□□□ -0.32
TCTN3-201ENST00000265993 FSD1Q9BTV5 496 aa13.08□□□□□ -0.32
TCTN3-201ENST00000265993 TMEM94Q12767 1356 aa13.08□□□□□ -0.32
TCTN3-201ENST00000265993 CCDC171Q6TFL3 1326 aa13.07□□□□□ -0.32
TCTN3-201ENST00000265993 WDR33Q9C0J8 1336 aaKnown RBP13.07□□□□□ -0.32
TCTN3-201ENST00000265993 CAMTA1Q9Y6Y1 1673 aa13.07□□□□□ -0.32
TCTN3-201ENST00000265993 ST3GAL1Q11201 340 aa13.07□□□□□ -0.32
TCTN3-201ENST00000265993 LARP1Q6PKG0 1096 aaKnown RBP13.07□□□□□ -0.32
TCTN3-201ENST00000265993 ANKRD13DQ6ZTN6 518 aa13.07□□□□□ -0.32
TCTN3-201ENST00000265993 ZNF589Q86UQ0 364 aaPredicted RBP13.07□□□□□ -0.32
TCTN3-201ENST00000265993 KAT6BQ8WYB5 2073 aa13.07□□□□□ -0.32
TCTN3-201ENST00000265993 FIBPO43427 364 aa13.07□□□□□ -0.32
TCTN3-201ENST00000265993 TTC5Q8N0Z6 440 aa13.07□□□□□ -0.32
TCTN3-201ENST00000265993 RUFY2Q8WXA3 655 aa13.07□□□□□ -0.32
TCTN3-201ENST00000265993 PDRG1Q9NUG6 133 aa13.07□□□□□ -0.32
TCTN3-201ENST00000265993 UTYO14607 1347 aa13.07□□□□□ -0.32
TCTN3-201ENST00000265993 OVOS2A0A0G2JMS6 1433 aa13.07□□□□□ -0.32
TCTN3-201ENST00000265993 ALS2Q96Q42 1657 aa13.06□□□□□ -0.32
TCTN3-201ENST00000265993 STX6O43752 255 aa13.06□□□□□ -0.32
TCTN3-201ENST00000265993 NECTIN1Q15223 517 aa13.06□□□□□ -0.32
TCTN3-201ENST00000265993 LRP10Q7Z4F1 713 aa13.06□□□□□ -0.32
TCTN3-201ENST00000265993 IFNL2Q8IZJ0 200 aa13.06□□□□□ -0.32
TCTN3-201ENST00000265993 SMC3Q9UQE7 1217 aa13.06□□□□□ -0.32
TCTN3-201ENST00000265993 GJB2P29033 226 aa13.06□□□□□ -0.32
TCTN3-201ENST00000265993 ME3Q16798 604 aa13.06□□□□□ -0.32
TCTN3-201ENST00000265993 CREB3L3Q68CJ9 461 aa13.06□□□□□ -0.32
TCTN3-201ENST00000265993 MPNDQ8N594 471 aa13.06□□□□□ -0.32
TCTN3-201ENST00000265993 METTL22Q9BUU2 404 aaPredicted RBP13.06□□□□□ -0.32
TCTN3-201ENST00000265993 MBD3O95983 291 aa13.05□□□□□ -0.32
TCTN3-201ENST00000265993 EPB41L2O43491 1005 aaKnown RBP13.05□□□□□ -0.32
TCTN3-201ENST00000265993 ZSCAN22P10073 491 aaPredicted RBP13.05□□□□□ -0.32
TCTN3-201ENST00000265993 TFCP2Q12800 502 aa13.05□□□□□ -0.32
TCTN3-201ENST00000265993 SLFNL1Q499Z3 407 aa13.05□□□□□ -0.32
TCTN3-201ENST00000265993 DBNLQ9UJU6 430 aaKnown RBP13.05□□□□□ -0.32
TCTN3-201ENST00000265993 CYP46A1Q9Y6A2 500 aa13.05□□□□□ -0.32
TCTN3-201ENST00000265993 ADAMTS7Q9UKP4 1686 aa13.05□□□□□ -0.32
TCTN3-201ENST00000265993 MST1RQ04912 1400 aa13.04□□□□□ -0.32
TCTN3-201ENST00000265993 TPCN1Q9ULQ1 816 aa13.04□□□□□ -0.32
TCTN3-201ENST00000265993 CHMP3Q9Y3E7 222 aa13.04□□□□□ -0.32
TCTN3-201ENST00000265993 AFDNP55196 1824 aaKnown RBP13.04□□□□□ -0.32
TCTN3-201ENST00000265993 A0A087WZG4 1122 aa13.04□□□□□ -0.32
TCTN3-201ENST00000265993 VPS37CA5D8V6 355 aaPredicted RBP13.04□□□□□ -0.32
TCTN3-201ENST00000265993 SNRPA1P09661 255 aaKnown RBP13.04□□□□□ -0.32
TCTN3-201ENST00000265993 PTPN12Q05209 780 aaKnown RBP13.04□□□□□ -0.32
TCTN3-201ENST00000265993 FAM173BQ6P4H8 233 aa13.04□□□□□ -0.32
TCTN3-201ENST00000265993 CCDC129Q6ZRS4 1044 aa13.04□□□□□ -0.32
TCTN3-201ENST00000265993 SEC62Q99442 399 aaKnown RBP13.04□□□□□ -0.32
TCTN3-201ENST00000265993 ZSWIM6Q9HCJ5 1215 aa13.04□□□□□ -0.32
TCTN3-201ENST00000265993 ZKSCAN1P17029 563 aaPredicted RBP13.04□□□□□ -0.32
TCTN3-201ENST00000265993 HSPA2P54652 639 aa13.04□□□□□ -0.32
TCTN3-201ENST00000265993 DNM1Q05193 864 aaKnown RBP13.04□□□□□ -0.32
TCTN3-201ENST00000265993 FERMT3Q86UX7 667 aa13.04□□□□□ -0.32
TCTN3-201ENST00000265993 MAP4K1Q92918 833 aa13.04□□□□□ -0.32
TCTN3-201ENST00000265993 DNAJC2Q99543 621 aaKnown RBP13.04□□□□□ -0.32
TCTN3-201ENST00000265993 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.04□□□□□ -0.32
TCTN3-201ENST00000265993 STRCP1A6NGW2 1772 aa13.03□□□□□ -0.32
TCTN3-201ENST00000265993 SLC27A2O14975 620 aa13.03□□□□□ -0.32
TCTN3-201ENST00000265993 F13A1P00488 732 aa13.03□□□□□ -0.32
TCTN3-201ENST00000265993 CABP4P57796 275 aa13.03□□□□□ -0.32
TCTN3-201ENST00000265993 STK3Q13188 491 aa13.03□□□□□ -0.32
TCTN3-201ENST00000265993 VPS53Q5VIR6 699 aa13.03□□□□□ -0.32
TCTN3-201ENST00000265993 ZSCAN30Q86W11 494 aa13.03□□□□□ -0.32
TCTN3-201ENST00000265993 DCAF5Q96JK2 942 aa13.03□□□□□ -0.32
TCTN3-201ENST00000265993 DBNDD2Q9BQY9 259 aa13.03□□□□□ -0.32
TCTN3-201ENST00000265993 HDAC5Q9UQL6 1122 aa13.03□□□□□ -0.32
TCTN3-201ENST00000265993 COL15A1P39059 1388 aa13.02□□□□□ -0.32
TCTN3-201ENST00000265993 RFX5P48382 616 aaPredicted RBP13.02□□□□□ -0.32
TCTN3-201ENST00000265993 DDX46Q7L014 1031 aaKnown RBP13.02□□□□□ -0.32
TCTN3-201ENST00000265993 FMNL2Q96PY5 1086 aa13.02□□□□□ -0.32
TCTN3-201ENST00000265993 COL18A1P39060 1754 aa13.02□□□□□ -0.33
TCTN3-201ENST00000265993 KIF1AQ12756 1690 aa13.02□□□□□ -0.33
TCTN3-201ENST00000265993 TTLL7Q6ZT98 887 aa13.02□□□□□ -0.33
TCTN3-201ENST00000265993 PDLIM2Q96JY6 352 aa13.02□□□□□ -0.33
TCTN3-201ENST00000265993 MTMR6Q9Y217 621 aa13.02□□□□□ -0.33
TCTN3-201ENST00000265993 NBPF26B4DH59 902 aa13.01□□□□□ -0.33
TCTN3-201ENST00000265993 TNNI3KQ59H18 835 aa13.01□□□□□ -0.33
TCTN3-201ENST00000265993 NBPF14Q5TI25 921 aa13.01□□□□□ -0.33
TCTN3-201ENST00000265993 NBPF10Q6P3W6 841 aaKnown RBP13.01□□□□□ -0.33
TCTN3-201ENST00000265993 LMBR1LQ6UX01 489 aa13.01□□□□□ -0.33
TCTN3-201ENST00000265993 NBPF15Q8N660 670 aa13.01□□□□□ -0.33
TCTN3-201ENST00000265993 FPGT-TNNI3KV9GXZ4 949 aa13.01□□□□□ -0.33
TCTN3-201ENST00000265993 A1BGP04217 495 aa13.01□□□□□ -0.33
TCTN3-201ENST00000265993 TSPY26PQ9H489 355 aa13.01□□□□□ -0.33
TCTN3-201ENST00000265993 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.01□□□□□ -0.33
TCTN3-201ENST00000265993 MSNP26038 577 aaKnown RBP13□□□□□ -0.33
TCTN3-201ENST00000265993 ZBTB3Q9H5J0 574 aa13□□□□□ -0.33
TCTN3-201ENST00000265993 ZNF330Q9Y3S2 320 aaPredicted RBP13□□□□□ -0.33
TCTN3-201ENST00000265993 CDC37L1Q7L3B6 337 aa13□□□□□ -0.33
TCTN3-201ENST00000265993 KCNB2Q92953 911 aa13□□□□□ -0.33
TCTN3-201ENST00000265993 LRRC2Q9BYS8 371 aa13□□□□□ -0.33
TCTN3-201ENST00000265993 COPRSQ9NQ92 184 aa13□□□□□ -0.33
TCTN3-201ENST00000265993 ARFGEF2Q9Y6D5 1785 aa13□□□□□ -0.33
TCTN3-201ENST00000265993 MED23Q9ULK4 1368 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms