RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 NLRP10Q86W26 655 aa9.27□□□□□ -0.93
DEPDC1B-201ENST00000265036 BCS1LQ9Y276 419 aa9.27□□□□□ -0.93
DEPDC1B-201ENST00000265036 DDX58O95786 925 aaKnown RBP9.26□□□□□ -0.93
DEPDC1B-201ENST00000265036 HCLS1P14317 486 aaPredicted RBP9.26□□□□□ -0.93
DEPDC1B-201ENST00000265036 SLC4A10Q6U841 1118 aa9.26□□□□□ -0.93
DEPDC1B-201ENST00000265036 TPTE2Q6XPS3 522 aa9.26□□□□□ -0.93
DEPDC1B-201ENST00000265036 C3orf67Q6ZVT6 689 aa9.26□□□□□ -0.93
DEPDC1B-201ENST00000265036 C2CD5Q86YS7 1000 aa9.26□□□□□ -0.93
DEPDC1B-201ENST00000265036 FAM89AQ96GI7 184 aa9.26□□□□□ -0.93
DEPDC1B-201ENST00000265036 TRMT112Q9UI30 125 aaKnown RBP9.26□□□□□ -0.93
DEPDC1B-201ENST00000265036 DLEC1Q9Y238 1755 aa9.26□□□□□ -0.93
DEPDC1B-201ENST00000265036 LAMB2P55268 1798 aa9.26□□□□□ -0.93
DEPDC1B-201ENST00000265036 ZNF622Q969S3 477 aaKnown RBP eCLIP9.26□□□□□ -0.936e-8■■■□□ 16.1
DEPDC1B-201ENST00000265036 DDX60Q8IY21 1712 aaKnown RBP9.25□□□□□ -0.93
DEPDC1B-201ENST00000265036 HSP90AB3PQ58FF7 597 aa9.25□□□□□ -0.93
DEPDC1B-201ENST00000265036 KSR2Q6VAB6 950 aa9.25□□□□□ -0.93
DEPDC1B-201ENST00000265036 IGKV5-2P06315 115 aa9.25□□□□□ -0.93
DEPDC1B-201ENST00000265036 KCNA3P22001 575 aa9.25□□□□□ -0.93
DEPDC1B-201ENST00000265036 MRPL50Q8N5N7 158 aaKnown RBP9.25□□□□□ -0.93
DEPDC1B-201ENST00000265036 CCDC85AQ96PX6 553 aaPredicted RBP9.25□□□□□ -0.93
DEPDC1B-201ENST00000265036 UTP14AQ9BVJ6 771 aaKnown RBP9.25□□□□□ -0.93
DEPDC1B-201ENST00000265036 SLX4Q8IY92 1834 aa9.24□□□□□ -0.93
DEPDC1B-201ENST00000265036 BCAR3O75815 825 aa9.24□□□□□ -0.93
DEPDC1B-201ENST00000265036 PARP10Q53GL7 1025 aa9.24□□□□□ -0.93
DEPDC1B-201ENST00000265036 PPP1R42Q7Z4L9 355 aa9.24□□□□□ -0.93
DEPDC1B-201ENST00000265036 DNAAF4Q8WXU2 420 aa9.24□□□□□ -0.93
DEPDC1B-201ENST00000265036 ISCA1Q9BUE6 129 aa9.24□□□□□ -0.93
DEPDC1B-201ENST00000265036 METTL22Q9BUU2 404 aaPredicted RBP9.24□□□□□ -0.93
DEPDC1B-201ENST00000265036 BRIP1Q9BX63 1249 aa9.24□□□□□ -0.93
DEPDC1B-201ENST00000265036 NYXQ9GZU5 481 aa9.24□□□□□ -0.93
DEPDC1B-201ENST00000265036 H0YIN7 160 aa9.24□□□□□ -0.93
DEPDC1B-201ENST00000265036 CHMP4AQ9BY43 222 aa9.24□□□□□ -0.93
DEPDC1B-201ENST00000265036 TNNQ9UQP3 1299 aa9.24□□□□□ -0.93
DEPDC1B-201ENST00000265036 COL4A1P02462 1669 aa9.23□□□□□ -0.93
DEPDC1B-201ENST00000265036 RARSP54136 660 aaKnown RBP9.23□□□□□ -0.93
DEPDC1B-201ENST00000265036 TGFB2P61812 414 aa9.23□□□□□ -0.93
DEPDC1B-201ENST00000265036 NEXNQ0ZGT2 675 aa9.23□□□□□ -0.93
DEPDC1B-201ENST00000265036 OLFM4Q6UX06 510 aa9.23□□□□□ -0.93
DEPDC1B-201ENST00000265036 FRAT1Q92837 279 aaPredicted RBP9.23□□□□□ -0.93
DEPDC1B-201ENST00000265036 SH3TC1Q8TE82 1336 aa9.23□□□□□ -0.93
DEPDC1B-201ENST00000265036 PDE6BP35913 854 aa9.23□□□□□ -0.93
DEPDC1B-201ENST00000265036 UBE3BQ7Z3V4 1068 aa9.23□□□□□ -0.93
DEPDC1B-201ENST00000265036 CWC25Q9NXE8 425 aaPredicted RBP9.23□□□□□ -0.93
DEPDC1B-201ENST00000265036 PIM2Q9P1W9 311 aa9.23□□□□□ -0.93
DEPDC1B-201ENST00000265036 NEURL1BA8MQ27 555 aa9.22□□□□□ -0.93
DEPDC1B-201ENST00000265036 RGL2O15211 777 aa9.22□□□□□ -0.93
DEPDC1B-201ENST00000265036 SRGNP10124 158 aa9.22□□□□□ -0.93
DEPDC1B-201ENST00000265036 NOB1Q9ULX3 412 aaKnown RBP9.22□□□□□ -0.93
DEPDC1B-201ENST00000265036 ARFGEF1Q9Y6D6 1849 aa9.22□□□□□ -0.93
DEPDC1B-201ENST00000265036 IBTKQ9P2D0 1353 aaPredicted RBP9.22□□□□□ -0.93
DEPDC1B-201ENST00000265036 DALRD3Q5D0E6 543 aaKnown RBP9.22□□□□□ -0.93
DEPDC1B-201ENST00000265036 PRPF40BQ6NWY9 871 aaKnown RBP9.22□□□□□ -0.93
DEPDC1B-201ENST00000265036 CLUAP1Q96AJ1 413 aa9.22□□□□□ -0.93
DEPDC1B-201ENST00000265036 MYH3P11055 1940 aa9.22□□□□□ -0.93
DEPDC1B-201ENST00000265036 SPEF2Q9C093 1822 aa9.21□□□□□ -0.93
DEPDC1B-201ENST00000265036 DCAF8L1A6NGE4 600 aa9.21□□□□□ -0.93
DEPDC1B-201ENST00000265036 IRS4O14654 1257 aaPredicted RBP9.21□□□□□ -0.93
DEPDC1B-201ENST00000265036 CCDC191Q8NCU4 936 aa9.21□□□□□ -0.93
DEPDC1B-201ENST00000265036 RPGRQ92834 1020 aaKnown RBP9.21□□□□□ -0.93
DEPDC1B-201ENST00000265036 C21orf2O43822 256 aa9.21□□□□□ -0.94
DEPDC1B-201ENST00000265036 ALDH1L2Q3SY69 923 aa9.21□□□□□ -0.94
DEPDC1B-201ENST00000265036 TTLL6Q8N841 843 aa9.21□□□□□ -0.94
DEPDC1B-201ENST00000265036 CHD4Q14839 1912 aa9.21□□□□□ -0.94
DEPDC1B-201ENST00000265036 RASSF7Q02833 373 aa9.2□□□□□ -0.94
DEPDC1B-201ENST00000265036 GCKRQ14397 625 aa9.2□□□□□ -0.94
DEPDC1B-201ENST00000265036 BEND3Q5T5X7 828 aa9.2□□□□□ -0.94
DEPDC1B-201ENST00000265036 ZBTB38Q8NAP3 1195 aaPredicted RBP9.2□□□□□ -0.94
DEPDC1B-201ENST00000265036 NLRP3Q96P20 1036 aa9.2□□□□□ -0.94
DEPDC1B-201ENST00000265036 CCDC88AQ3V6T2 1871 aa9.2□□□□□ -0.94
DEPDC1B-201ENST00000265036 ARHGAP27Q6ZUM4 889 aa9.2□□□□□ -0.94
DEPDC1B-201ENST00000265036 LINS1Q8NG48 757 aa9.2□□□□□ -0.94
DEPDC1B-201ENST00000265036 MASTLQ96GX5 879 aa9.2□□□□□ -0.94
DEPDC1B-201ENST00000265036 ABCC4O15439 1325 aa9.19□□□□□ -0.94
DEPDC1B-201ENST00000265036 CT47B1P0C2W7 299 aaPredicted RBP9.19□□□□□ -0.94
DEPDC1B-201ENST00000265036 NPR1P16066 1061 aa9.19□□□□□ -0.94
DEPDC1B-201ENST00000265036 TRIM28Q13263 835 aaKnown RBP9.19□□□□□ -0.94
DEPDC1B-201ENST00000265036 CRY2Q49AN0 593 aa9.19□□□□□ -0.94
DEPDC1B-201ENST00000265036 SRCIN1Q9C0H9 1055 aa9.19□□□□□ -0.94
DEPDC1B-201ENST00000265036 PTPRCP08575 1304 aa9.19□□□□□ -0.94
DEPDC1B-201ENST00000265036 KIF16BQ96L93 1317 aa9.19□□□□□ -0.94
DEPDC1B-201ENST00000265036 PCCAP05165 728 aaPredicted RBP9.19□□□□□ -0.94
DEPDC1B-201ENST00000265036 SEC31BQ9NQW1 1179 aa9.19□□□□□ -0.94
DEPDC1B-201ENST00000265036 NBPF7P0C2Y1 421 aaPredicted RBP9.18□□□□□ -0.94
DEPDC1B-201ENST00000265036 TRIM27P14373 513 aa9.18□□□□□ -0.94
DEPDC1B-201ENST00000265036 C9orf78Q9NZ63 289 aaPredicted RBP9.18□□□□□ -0.94
DEPDC1B-201ENST00000265036 CHMP3Q9Y3E7 222 aa9.18□□□□□ -0.94
DEPDC1B-201ENST00000265036 RIC1Q4ADV7 1423 aa9.18□□□□□ -0.94
DEPDC1B-201ENST00000265036 RNF123Q5XPI4 1314 aa9.18□□□□□ -0.94
DEPDC1B-201ENST00000265036 KLRG2A4D1S0 409 aaPredicted RBP9.17□□□□□ -0.94
DEPDC1B-201ENST00000265036 PLIN1O60240 522 aa9.17□□□□□ -0.94
DEPDC1B-201ENST00000265036 STYK1Q6J9G0 422 aa9.17□□□□□ -0.94
DEPDC1B-201ENST00000265036 CELF1Q92879 486 aaKnown RBP9.17□□□□□ -0.94
DEPDC1B-201ENST00000265036 CNKSR1Q969H4 720 aa9.17□□□□□ -0.94
DEPDC1B-201ENST00000265036 FER1L6Q2WGJ9 1857 aa9.17□□□□□ -0.94
DEPDC1B-201ENST00000265036 FAM161AQ3B820 660 aa9.17□□□□□ -0.94
DEPDC1B-201ENST00000265036 SLC10A5Q5PT55 438 aa9.17□□□□□ -0.94
DEPDC1B-201ENST00000265036 DDX46Q7L014 1031 aaKnown RBP9.17□□□□□ -0.94
DEPDC1B-201ENST00000265036 SBF1O95248 1867 aa9.17□□□□□ -0.94
DEPDC1B-201ENST00000265036 NFKBIEO00221 500 aa9.16□□□□□ -0.94
DEPDC1B-201ENST00000265036 GRM8O00222 908 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms