RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 MAP3K11Q16584 847 aa17.1■□□□□ 0.33
CCDC6-201ENST00000263102 EAPPQ56P03 285 aaPredicted RBP17.1■□□□□ 0.33
CCDC6-201ENST00000263102 TOP1P11387 765 aaKnown RBP17.1■□□□□ 0.33
CCDC6-201ENST00000263102 NFE2L2Q16236 605 aa17.1■□□□□ 0.33
CCDC6-201ENST00000263102 PSMC4P43686 418 aa17.09■□□□□ 0.33
CCDC6-201ENST00000263102 TTF1Q15361 905 aaPredicted RBP17.09■□□□□ 0.33
CCDC6-201ENST00000263102 ERMNQ8TAM6 284 aa17.09■□□□□ 0.33
CCDC6-201ENST00000263102 TBC1D5Q92609 795 aa17.09■□□□□ 0.33
CCDC6-201ENST00000263102 B4DLN1 442 aa17.09■□□□□ 0.33
CCDC6-201ENST00000263102 MRPL12P52815 198 aaKnown RBP17.09■□□□□ 0.33
CCDC6-201ENST00000263102 CCDC63Q8NA47 563 aa17.09■□□□□ 0.33
CCDC6-201ENST00000263102 JAG2Q9Y219 1238 aa17.09■□□□□ 0.33
CCDC6-201ENST00000263102 SYNJ2O15056 1496 aa17.09■□□□□ 0.33
CCDC6-201ENST00000263102 EEF2P13639 858 aaKnown RBP17.09■□□□□ 0.33
CCDC6-201ENST00000263102 MVPQ14764 893 aaKnown RBP17.09■□□□□ 0.33
CCDC6-201ENST00000263102 RNF187Q5TA31 235 aaPredicted RBP17.09■□□□□ 0.33
CCDC6-201ENST00000263102 NME9Q86XW9 330 aa17.09■□□□□ 0.33
CCDC6-201ENST00000263102 PAIP2Q9BPZ3 127 aaKnown RBP17.09■□□□□ 0.33
CCDC6-201ENST00000263102 ODF2LQ9ULJ1 636 aa17.09■□□□□ 0.33
CCDC6-201ENST00000263102 BIN1O00499 593 aa17.09■□□□□ 0.33
CCDC6-201ENST00000263102 HAUS7Q99871 368 aa17.09■□□□□ 0.33
CCDC6-201ENST00000263102 GLRX3O76003 335 aaKnown RBP17.08■□□□□ 0.33
CCDC6-201ENST00000263102 PAFAH1B1P43034 410 aa17.08■□□□□ 0.33
CCDC6-201ENST00000263102 KRT13P13646 458 aa17.08■□□□□ 0.33
CCDC6-201ENST00000263102 ZNF804AQ7Z570 1209 aa17.08■□□□□ 0.32
CCDC6-201ENST00000263102 SREK1Q8WXA9 508 aaKnown RBP17.08■□□□□ 0.32
CCDC6-201ENST00000263102 GPHNQ9NQX3 736 aaPredicted RBP17.08■□□□□ 0.32
CCDC6-201ENST00000263102 EXOC1Q9NV70 894 aa17.08■□□□□ 0.32
CCDC6-201ENST00000263102 SHTN1A0MZ66 631 aa17.08■□□□□ 0.32
CCDC6-201ENST00000263102 CYP7A1P22680 504 aa17.08■□□□□ 0.32
CCDC6-201ENST00000263102 RAB11FIP3O75154 756 aa17.08■□□□□ 0.32
CCDC6-201ENST00000263102 IMPG2Q9BZV3 1241 aa17.08■□□□□ 0.32
CCDC6-201ENST00000263102 TEX13AQ9BXU3 409 aaPredicted RBP17.07■□□□□ 0.32
CCDC6-201ENST00000263102 UBA7P41226 1012 aa17.07■□□□□ 0.32
CCDC6-201ENST00000263102 HYPKQ9NX55 129 aa17.07■□□□□ 0.32
CCDC6-201ENST00000263102 DNAAF4Q8WXU2 420 aa17.07■□□□□ 0.32
CCDC6-201ENST00000263102 A0A1W2PRG0 241 aa17.07■□□□□ 0.32
CCDC6-201ENST00000263102 BACH1O14867 736 aa17.07■□□□□ 0.32
CCDC6-201ENST00000263102 CCDC175P0C221 793 aa17.07■□□□□ 0.32
CCDC6-201ENST00000263102 SNX16P57768 344 aa17.07■□□□□ 0.32
CCDC6-201ENST00000263102 SPATA24Q86W54 205 aa17.07■□□□□ 0.32
CCDC6-201ENST00000263102 IFNL2Q8IZJ0 200 aa17.07■□□□□ 0.32
CCDC6-201ENST00000263102 HARSP12081 509 aaKnown RBP17.06■□□□□ 0.32
CCDC6-201ENST00000263102 MAATS1Q7Z4T9 603 aa17.06■□□□□ 0.32
CCDC6-201ENST00000263102 TIGD1Q96MW7 591 aa17.06■□□□□ 0.32
CCDC6-201ENST00000263102 BMS1Q14692 1282 aaKnown RBP17.06■□□□□ 0.32
CCDC6-201ENST00000263102 RNF34Q969K3 372 aa17.06■□□□□ 0.32
CCDC6-201ENST00000263102 GINS2Q9Y248 185 aa17.06■□□□□ 0.32
CCDC6-201ENST00000263102 RPGRIP1LQ68CZ1 1315 aa17.06■□□□□ 0.32
CCDC6-201ENST00000263102 ZBTB24O43167 697 aaPredicted RBP17.06■□□□□ 0.32
CCDC6-201ENST00000263102 NIP7Q9Y221 180 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCDC6-201ENST00000263102 CCDC61Q9Y6R9 512 aa17.06■□□□□ 0.32
CCDC6-201ENST00000263102 FAM13AO94988 1023 aa17.06■□□□□ 0.32
CCDC6-201ENST00000263102 IARSP41252 1262 aaKnown RBP17.05■□□□□ 0.32
CCDC6-201ENST00000263102 MXRA7P84157 204 aa17.05■□□□□ 0.32
CCDC6-201ENST00000263102 GSTA5Q7RTV2 222 aa17.05■□□□□ 0.32
CCDC6-201ENST00000263102 TMEM57Q8N5G2 664 aa17.05■□□□□ 0.32
CCDC6-201ENST00000263102 SLC4A4Q9Y6R1 1079 aa17.05■□□□□ 0.32
CCDC6-201ENST00000263102 SFPQP23246 707 aaKnown RBP eCLIP17.05■□□□□ 0.32
CCDC6-201ENST00000263102 RBM25P49756 843 aaKnown RBP17.05■□□□□ 0.32
CCDC6-201ENST00000263102 METAP2P50579 478 aaKnown RBP eCLIP17.05■□□□□ 0.32
CCDC6-201ENST00000263102 UBXN4Q92575 508 aa17.05■□□□□ 0.32
CCDC6-201ENST00000263102 NLRP3Q96P20 1036 aa17.05■□□□□ 0.32
CCDC6-201ENST00000263102 USP16Q9Y5T5 823 aa17.05■□□□□ 0.32
CCDC6-201ENST00000263102 CCDC50Q8IVM0 306 aa17.05■□□□□ 0.32
CCDC6-201ENST00000263102 ANKRD24Q8TF21 1146 aa17.05■□□□□ 0.32
CCDC6-201ENST00000263102 STK32BQ9NY57 414 aa17.05■□□□□ 0.32
CCDC6-201ENST00000263102 WIZO95785 1651 aa17.05■□□□□ 0.32
CCDC6-201ENST00000263102 ATAD2Q6PL18 1390 aa17.05■□□□□ 0.32
CCDC6-201ENST00000263102 URI1O94763 535 aaPredicted RBP17.04■□□□□ 0.32
CCDC6-201ENST00000263102 FCHSD2O94868 740 aa17.04■□□□□ 0.32
CCDC6-201ENST00000263102 GPR162Q16538 588 aa17.04■□□□□ 0.32
CCDC6-201ENST00000263102 IQCGQ9H095 443 aaKnown RBP17.04■□□□□ 0.32
CCDC6-201ENST00000263102 UBE3BQ7Z3V4 1068 aa17.04■□□□□ 0.32
CCDC6-201ENST00000263102 KMT5BQ4FZB7 885 aa17.04■□□□□ 0.32
CCDC6-201ENST00000263102 ATXN8OSP0DMR3 200 aa17.04■□□□□ 0.32
CCDC6-201ENST00000263102 IFIT1BQ5T764 474 aaKnown RBP17.04■□□□□ 0.32
CCDC6-201ENST00000263102 USP37Q86T82 979 aa17.04■□□□□ 0.32
CCDC6-201ENST00000263102 ZC3H12CQ9C0D7 883 aaKnown RBP17.04■□□□□ 0.32
CCDC6-201ENST00000263102 ZSCAN12O43309 604 aa17.04■□□□□ 0.32
CCDC6-201ENST00000263102 RASA3Q14644 834 aa17.04■□□□□ 0.32
CCDC6-201ENST00000263102 DDB1Q16531 1140 aa17.04■□□□□ 0.32
CCDC6-201ENST00000263102 FAM114A1Q8IWE2 563 aa17.03■□□□□ 0.32
CCDC6-201ENST00000263102 ANO10Q9NW15 660 aa17.03■□□□□ 0.32
CCDC6-201ENST00000263102 BRD4O60885 1362 aaPredicted RBP17.03■□□□□ 0.32
CCDC6-201ENST00000263102 TRIM47Q96LD4 638 aa17.03■□□□□ 0.32
CCDC6-201ENST00000263102 HMGB1P09429 215 aaKnown RBP17.03■□□□□ 0.32
CCDC6-201ENST00000263102 RPAP2Q8IXW5 612 aaPredicted RBP17.03■□□□□ 0.32
CCDC6-201ENST00000263102 NACA2Q9H009 215 aa17.03■□□□□ 0.32
CCDC6-201ENST00000263102 PICK1Q9NRD5 415 aa17.03■□□□□ 0.32
CCDC6-201ENST00000263102 MSH6P52701 1360 aa17.03■□□□□ 0.32
CCDC6-201ENST00000263102 NAPAP54920 295 aa17.02■□□□□ 0.32
CCDC6-201ENST00000263102 TMOD4Q9NZQ9 345 aa17.02■□□□□ 0.32
CCDC6-201ENST00000263102 NSFL1CQ9UNZ2 370 aaKnown RBP17.02■□□□□ 0.32
CCDC6-201ENST00000263102 FGD5Q6ZNL6 1462 aa17.02■□□□□ 0.32
CCDC6-201ENST00000263102 SYCE3A1L190 88 aa17.02■□□□□ 0.32
CCDC6-201ENST00000263102 GABPAQ06546 454 aa17.02■□□□□ 0.32
CCDC6-201ENST00000263102 WDR63Q8IWG1 891 aa17.02■□□□□ 0.32
CCDC6-201ENST00000263102 FSIP1Q8NA03 581 aa17.02■□□□□ 0.32
CCDC6-201ENST00000263102 NSD3Q9BZ95 1437 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms