RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 GPTP24298 496 aa16.51■□□□□ 0.23
VMP1-201ENST00000262291 UBR2Q8IWV8 1755 aa16.51■□□□□ 0.23
VMP1-201ENST00000262291 TNS2Q63HR2 1409 aa16.5■□□□□ 0.23
VMP1-201ENST00000262291 LTBP4Q8N2S1 1624 aa16.5■□□□□ 0.23
VMP1-201ENST00000262291 NEK4P51957 841 aa16.5■□□□□ 0.23
VMP1-201ENST00000262291 FOXO4P98177 505 aa16.5■□□□□ 0.23
VMP1-201ENST00000262291 UPF3BQ9BZI7 483 aaKnown RBP16.5■□□□□ 0.23
VMP1-201ENST00000262291 COL14A1Q05707 1796 aaKnown RBP16.49■□□□□ 0.23
VMP1-201ENST00000262291 DISP2A7MBM2 1401 aa16.49■□□□□ 0.23
VMP1-201ENST00000262291 H7C1W4 665 aa16.49■□□□□ 0.23
VMP1-201ENST00000262291 HLFQ16534 295 aa16.48■□□□□ 0.23
VMP1-201ENST00000262291 FAM89AQ96GI7 184 aa16.48■□□□□ 0.23
VMP1-201ENST00000262291 ERBB4Q15303 1308 aa16.48■□□□□ 0.23
VMP1-201ENST00000262291 TTC41PQ6P2S7 1318 aa16.48■□□□□ 0.23
VMP1-201ENST00000262291 AK9Q5TCS8 1911 aa16.48■□□□□ 0.23
VMP1-201ENST00000262291 GPATCH3Q96I76 525 aa16.48■□□□□ 0.23
VMP1-201ENST00000262291 DIAPH3Q9NSV4 1193 aa16.48■□□□□ 0.23
VMP1-201ENST00000262291 AHDC1Q5TGY3 1603 aaPredicted RBP16.48■□□□□ 0.23
VMP1-201ENST00000262291 CHGBP05060 677 aa16.47■□□□□ 0.23
VMP1-201ENST00000262291 ZBTB1Q9Y2K1 713 aa16.47■□□□□ 0.23
VMP1-201ENST00000262291 PAPPAQ13219 1627 aa16.47■□□□□ 0.23
VMP1-201ENST00000262291 DDB1Q16531 1140 aa16.47■□□□□ 0.23
VMP1-201ENST00000262291 RABL6Q3YEC7 729 aaPredicted RBP16.47■□□□□ 0.23
VMP1-201ENST00000262291 LARP6Q9BRS8 491 aaKnown RBP16.47■□□□□ 0.23
VMP1-201ENST00000262291 PODXL2Q9NZ53 605 aa16.47■□□□□ 0.23
VMP1-201ENST00000262291 PHLPP1O60346 1717 aa16.47■□□□□ 0.23
VMP1-201ENST00000262291 ITGB4P16144 1822 aa16.47■□□□□ 0.23
VMP1-201ENST00000262291 SGSM2O43147 1006 aa16.47■□□□□ 0.23
VMP1-201ENST00000262291 STARD3NLO95772 234 aa16.47■□□□□ 0.23
VMP1-201ENST00000262291 DDIT3P35638 169 aa16.47■□□□□ 0.23
VMP1-201ENST00000262291 ZGPATQ8N5A5 531 aaKnown RBP16.47■□□□□ 0.23
VMP1-201ENST00000262291 FAM227BQ96M60 508 aa16.47■□□□□ 0.23
VMP1-201ENST00000262291 USP42Q9H9J4 1324 aaKnown RBP16.47■□□□□ 0.23
VMP1-201ENST00000262291 COPRSQ9NQ92 184 aa16.47■□□□□ 0.23
VMP1-201ENST00000262291 DBNLQ9UJU6 430 aaKnown RBP16.47■□□□□ 0.23
VMP1-201ENST00000262291 TBC1D2BQ9UPU7 963 aa16.47■□□□□ 0.23
VMP1-201ENST00000262291 LRRC24Q50LG9 513 aa16.46■□□□□ 0.23
VMP1-201ENST00000262291 KIF6Q6ZMV9 814 aa16.46■□□□□ 0.23
VMP1-201ENST00000262291 DBNDD2Q9BQY9 259 aa16.46■□□□□ 0.23
VMP1-201ENST00000262291 SPATA31A1Q5TZJ5 1347 aa16.46■□□□□ 0.22
VMP1-201ENST00000262291 UBAP1LF5GYI3 381 aa16.46■□□□□ 0.22
VMP1-201ENST00000262291 PUS3Q9BZE2 481 aaKnown RBP16.46■□□□□ 0.22
VMP1-201ENST00000262291 BCL9O00512 1426 aa16.45■□□□□ 0.22
VMP1-201ENST00000262291 ST18O60284 1047 aa16.45■□□□□ 0.22
VMP1-201ENST00000262291 MCCP23508 829 aa16.45■□□□□ 0.22
VMP1-201ENST00000262291 PTH1RQ03431 593 aa16.45■□□□□ 0.22
VMP1-201ENST00000262291 TNNI3KQ59H18 835 aa16.45■□□□□ 0.22
VMP1-201ENST00000262291 MARCH10Q8NA82 808 aaPredicted RBP16.45■□□□□ 0.22
VMP1-201ENST00000262291 NEUROD6Q96NK8 337 aa16.45■□□□□ 0.22
VMP1-201ENST00000262291 FPGT-TNNI3KV9GXZ4 949 aa16.45■□□□□ 0.22
VMP1-201ENST00000262291 CYP19A1P11511 503 aaPredicted RBP16.45■□□□□ 0.22
VMP1-201ENST00000262291 CPA1P15085 419 aa16.45■□□□□ 0.22
VMP1-201ENST00000262291 SSFA2P28290 1259 aa16.45■□□□□ 0.22
VMP1-201ENST00000262291 TCIRG1Q13488 830 aa16.45■□□□□ 0.22
VMP1-201ENST00000262291 TNPO1Q92973 898 aaKnown RBP16.45■□□□□ 0.22
VMP1-201ENST00000262291 FAM177BA6PVY3 158 aa16.44■□□□□ 0.22
VMP1-201ENST00000262291 DTNBO60941 627 aa16.44■□□□□ 0.22
VMP1-201ENST00000262291 TIMM10P62072 90 aa16.44■□□□□ 0.22
VMP1-201ENST00000262291 CCDC191Q8NCU4 936 aa16.44■□□□□ 0.22
VMP1-201ENST00000262291 C8orf37Q96NL8 207 aa16.44■□□□□ 0.22
VMP1-201ENST00000262291 DNAJC2Q99543 621 aaKnown RBP16.44■□□□□ 0.22
VMP1-201ENST00000262291 LSG1Q9H089 658 aaKnown RBP16.44■□□□□ 0.22
VMP1-201ENST00000262291 MCM4P33991 863 aa16.44■□□□□ 0.22
VMP1-201ENST00000262291 KCNQ4P56696 695 aa16.44■□□□□ 0.22
VMP1-201ENST00000262291 PKP1Q13835 747 aa16.44■□□□□ 0.22
VMP1-201ENST00000262291 RASEFQ8IZ41 740 aa16.44■□□□□ 0.22
VMP1-201ENST00000262291 FSD1Q9BTV5 496 aa16.44■□□□□ 0.22
VMP1-201ENST00000262291 KCNQ2O43526 872 aa16.43■□□□□ 0.22
VMP1-201ENST00000262291 NMIQ13287 307 aaPredicted RBP16.43■□□□□ 0.22
VMP1-201ENST00000262291 KIAA1211Q6ZU35 1233 aa16.43■□□□□ 0.22
VMP1-201ENST00000262291 GZF1Q9H116 711 aaPredicted RBP16.43■□□□□ 0.22
VMP1-201ENST00000262291 NUP188Q5SRE5 1749 aa16.43■□□□□ 0.22
VMP1-201ENST00000262291 TOM1O60784 492 aa16.43■□□□□ 0.22
VMP1-201ENST00000262291 FAM98CQ17RN3 349 aaKnown RBP16.43■□□□□ 0.22
VMP1-201ENST00000262291 FOXD4L5Q5VV16 416 aaPredicted RBP16.43■□□□□ 0.22
VMP1-201ENST00000262291 FOXD4L4Q8WXT5 416 aaPredicted RBP16.43■□□□□ 0.22
VMP1-201ENST00000262291 ISCA1Q9BUE6 129 aa16.43■□□□□ 0.22
VMP1-201ENST00000262291 SLFNL1Q499Z3 407 aa16.42■□□□□ 0.22
VMP1-201ENST00000262291 EVI5LQ96CN4 794 aa16.42■□□□□ 0.22
VMP1-201ENST00000262291 PLCH1Q4KWH8 1693 aa16.42■□□□□ 0.22
VMP1-201ENST00000262291 ATG9AQ7Z3C6 839 aa16.42■□□□□ 0.22
VMP1-201ENST00000262291 PANK2Q9BZ23 570 aa16.42■□□□□ 0.22
VMP1-201ENST00000262291 COL22A1Q8NFW1 1626 aaPredicted RBP16.41■□□□□ 0.22
VMP1-201ENST00000262291 A0A0D9SFI3 127 aa16.41■□□□□ 0.22
VMP1-201ENST00000262291 TEX13AQ9BXU3 409 aaPredicted RBP16.41■□□□□ 0.22
VMP1-201ENST00000262291 HSPA4P34932 840 aa16.41■□□□□ 0.22
VMP1-201ENST00000262291 MAP3K15Q6ZN16 1313 aa16.41■□□□□ 0.22
VMP1-201ENST00000262291 RAD50Q92878 1312 aa16.41■□□□□ 0.22
VMP1-201ENST00000262291 TJP1Q07157 1748 aa16.41■□□□□ 0.22
VMP1-201ENST00000262291 PRPF40BQ6NWY9 871 aaKnown RBP16.4■□□□□ 0.22
VMP1-201ENST00000262291 DDX46Q7L014 1031 aaKnown RBP16.4■□□□□ 0.22
VMP1-201ENST00000262291 CHAMP1Q96JM3 812 aa16.4■□□□□ 0.22
VMP1-201ENST00000262291 SNX14Q9Y5W7 946 aa16.4■□□□□ 0.22
VMP1-201ENST00000262291 RRP9O43818 475 aaKnown RBP16.4■□□□□ 0.22
VMP1-201ENST00000262291 FAM182BQ5T319 152 aa16.4■□□□□ 0.22
VMP1-201ENST00000262291 SMIM5Q71RC9 77 aa16.4■□□□□ 0.22
VMP1-201ENST00000262291 NGLY1Q96IV0 654 aa16.4■□□□□ 0.22
VMP1-201ENST00000262291 TMX3Q96JJ7 454 aa16.4■□□□□ 0.22
VMP1-201ENST00000262291 ATP6V1AP38606 617 aa16.39■□□□□ 0.22
VMP1-201ENST00000262291 SPATA31A5Q5VU36 1347 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms