RNA–Protein interactions for RNA: ENST00000262101.9

MSR1-201, Transcript of macrophage scavenger receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSR1, Length 2,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-201ENST00000262101 FAM89AQ96GI7 184 aa18.58■□□□□ 0.56
MSR1-201ENST00000262101 TRMT112Q9UI30 125 aaKnown RBP18.58■□□□□ 0.56
MSR1-201ENST00000262101 ABCC12Q96J65 1359 aa18.57■□□□□ 0.56
MSR1-201ENST00000262101 ALDH1L2Q3SY69 923 aa18.57■□□□□ 0.56
MSR1-201ENST00000262101 NYXQ9GZU5 481 aa18.57■□□□□ 0.56
MSR1-201ENST00000262101 CT47B1P0C2W7 299 aaPredicted RBP18.56■□□□□ 0.56
MSR1-201ENST00000262101 TRIM28Q13263 835 aaKnown RBP18.56■□□□□ 0.56
MSR1-201ENST00000262101 DNAAF4Q8WXU2 420 aa18.56■□□□□ 0.56
MSR1-201ENST00000262101 N4BP2Q86UW6 1770 aaPredicted RBP18.56■□□□□ 0.56
MSR1-201ENST00000262101 ARFGEF2Q9Y6D5 1785 aa18.56■□□□□ 0.56
MSR1-201ENST00000262101 BCAR3O75815 825 aa18.56■□□□□ 0.56
MSR1-201ENST00000262101 C2CD5Q86YS7 1000 aa18.56■□□□□ 0.56
MSR1-201ENST00000262101 KIF13BQ9NQT8 1826 aa18.55■□□□□ 0.56
MSR1-201ENST00000262101 HCLS1P14317 486 aaPredicted RBP18.55■□□□□ 0.56
MSR1-201ENST00000262101 YBX3P16989 372 aaKnown RBP eCLIP18.55■□□□□ 0.56
MSR1-201ENST00000262101 C3orf67Q6ZVT6 689 aa18.55■□□□□ 0.56
MSR1-201ENST00000262101 PDE6BP35913 854 aa18.55■□□□□ 0.56
MSR1-201ENST00000262101 GPR162Q16538 588 aa18.55■□□□□ 0.56
MSR1-201ENST00000262101 H0YIN7 160 aa18.54■□□□□ 0.56
MSR1-201ENST00000262101 SLC4A10Q6U841 1118 aa18.54■□□□□ 0.56
MSR1-201ENST00000262101 NOB1Q9ULX3 412 aaKnown RBP18.54■□□□□ 0.56
MSR1-201ENST00000262101 NEXNQ0ZGT2 675 aa18.53■□□□□ 0.56
MSR1-201ENST00000262101 CCDC191Q8NCU4 936 aa18.53■□□□□ 0.56
MSR1-201ENST00000262101 ANKRD31Q8N7Z5 1873 aa18.53■□□□□ 0.56
MSR1-201ENST00000262101 CACNA1FO60840 1977 aa18.53■□□□□ 0.56
MSR1-201ENST00000262101 KIAA1551Q9HCM1 1747 aa18.53■□□□□ 0.56
MSR1-201ENST00000262101 NEURL1BA8MQ27 555 aa18.53■□□□□ 0.56
MSR1-201ENST00000262101 SRGNP10124 158 aa18.53■□□□□ 0.56
MSR1-201ENST00000262101 ZNF622Q969S3 477 aaKnown RBP eCLIP18.53■□□□□ 0.56
MSR1-201ENST00000262101 PIM2Q9P1W9 311 aa18.53■□□□□ 0.56
MSR1-201ENST00000262101 BCS1LQ9Y276 419 aa18.53■□□□□ 0.56
MSR1-201ENST00000262101 KLRG2A4D1S0 409 aaPredicted RBP18.52■□□□□ 0.56
MSR1-201ENST00000262101 BEND3Q5T5X7 828 aa18.52■□□□□ 0.56
MSR1-201ENST00000262101 CWC25Q9NXE8 425 aaPredicted RBP18.52■□□□□ 0.56
MSR1-201ENST00000262101 SH3TC1Q8TE82 1336 aa18.52■□□□□ 0.56
MSR1-201ENST00000262101 SLC10A5Q5PT55 438 aa18.52■□□□□ 0.55
MSR1-201ENST00000262101 ANKRD36CQ5JPF3 1778 aa18.52■□□□□ 0.55
MSR1-201ENST00000262101 ZBTB38Q8NAP3 1195 aaPredicted RBP18.51■□□□□ 0.55
MSR1-201ENST00000262101 IBTKQ9P2D0 1353 aaPredicted RBP18.5■□□□□ 0.55
MSR1-201ENST00000262101 LINS1Q8NG48 757 aa18.5■□□□□ 0.55
MSR1-201ENST00000262101 GCKRQ14397 625 aa18.5■□□□□ 0.55
MSR1-201ENST00000262101 PTPRCP08575 1304 aa18.49■□□□□ 0.55
MSR1-201ENST00000262101 BRPF1P55201 1214 aaPredicted RBP18.49■□□□□ 0.55
MSR1-201ENST00000262101 NLRP3Q96P20 1036 aa18.49■□□□□ 0.55
MSR1-201ENST00000262101 IRS4O14654 1257 aaPredicted RBP18.49■□□□□ 0.55
MSR1-201ENST00000262101 CRY2Q49AN0 593 aa18.49■□□□□ 0.55
MSR1-201ENST00000262101 FRAT1Q92837 279 aaPredicted RBP18.49■□□□□ 0.55
MSR1-201ENST00000262101 MASTLQ96GX5 879 aa18.49■□□□□ 0.55
MSR1-201ENST00000262101 TNNQ9UQP3 1299 aa18.49■□□□□ 0.55
MSR1-201ENST00000262101 PCCAP05165 728 aaPredicted RBP18.48■□□□□ 0.55
MSR1-201ENST00000262101 DALRD3Q5D0E6 543 aaKnown RBP18.48■□□□□ 0.55
MSR1-201ENST00000262101 ZNF219Q9P2Y4 722 aaPredicted RBP18.48■□□□□ 0.55
MSR1-201ENST00000262101 TNRC6CQ9HCJ0 1690 aaKnown RBP18.48■□□□□ 0.55
MSR1-201ENST00000262101 TTLL6Q8N841 843 aa18.47■□□□□ 0.55
MSR1-201ENST00000262101 UBE3BQ7Z3V4 1068 aa18.47■□□□□ 0.55
MSR1-201ENST00000262101 SLC51AQ86UW1 340 aa18.47■□□□□ 0.55
MSR1-201ENST00000262101 RNF123Q5XPI4 1314 aa18.46■□□□□ 0.55
MSR1-201ENST00000262101 H7C1W4 665 aa18.46■□□□□ 0.55
MSR1-201ENST00000262101 NPR1P16066 1061 aa18.46■□□□□ 0.55
MSR1-201ENST00000262101 COL11A2P13942 1736 aaPredicted RBP18.46■□□□□ 0.55
MSR1-201ENST00000262101 CCDC85AQ96PX6 553 aaPredicted RBP18.46■□□□□ 0.55
MSR1-201ENST00000262101 SRCIN1Q9C0H9 1055 aa18.46■□□□□ 0.55
MSR1-201ENST00000262101 DCAF8L1A6NGE4 600 aa18.45■□□□□ 0.54
MSR1-201ENST00000262101 STYK1Q6J9G0 422 aa18.45■□□□□ 0.54
MSR1-201ENST00000262101 OLFM4Q6UX06 510 aa18.45■□□□□ 0.54
MSR1-201ENST00000262101 PDZRN3Q9UPQ7 1066 aa18.45■□□□□ 0.54
MSR1-201ENST00000262101 CASP7P55210 303 aa18.44■□□□□ 0.54
MSR1-201ENST00000262101 PRPF40BQ6NWY9 871 aaKnown RBP18.44■□□□□ 0.54
MSR1-201ENST00000262101 RPGRQ92834 1020 aaKnown RBP18.44■□□□□ 0.54
MSR1-201ENST00000262101 CLUAP1Q96AJ1 413 aa18.44■□□□□ 0.54
MSR1-201ENST00000262101 C21orf2O43822 256 aa18.44■□□□□ 0.54
MSR1-201ENST00000262101 BRCA1P38398 1863 aaKnown RBP18.44■□□□□ 0.54
MSR1-201ENST00000262101 TRIM27P14373 513 aa18.43■□□□□ 0.54
MSR1-201ENST00000262101 CNKSR1Q969H4 720 aa18.43■□□□□ 0.54
MSR1-201ENST00000262101 NBPF7P0C2Y1 421 aaPredicted RBP18.43■□□□□ 0.54
MSR1-201ENST00000262101 HOXA10P31260 410 aaPredicted RBP18.43■□□□□ 0.54
MSR1-201ENST00000262101 RIC1Q4ADV7 1423 aa18.42■□□□□ 0.54
MSR1-201ENST00000262101 KIF16BQ96L93 1317 aa18.42■□□□□ 0.54
MSR1-201ENST00000262101 ARHGAP27Q6ZUM4 889 aa18.42■□□□□ 0.54
MSR1-201ENST00000262101 ARHGAP45Q92619 1136 aa18.42■□□□□ 0.54
MSR1-201ENST00000262101 C9orf78Q9NZ63 289 aaPredicted RBP18.42■□□□□ 0.54
MSR1-201ENST00000262101 GRM8O00222 908 aa18.41■□□□□ 0.54
MSR1-201ENST00000262101 GRIN3BO60391 1043 aa18.41■□□□□ 0.54
MSR1-201ENST00000262101 PDE8AO60658 829 aa18.41■□□□□ 0.54
MSR1-201ENST00000262101 ALDH1L1O75891 902 aa18.41■□□□□ 0.54
MSR1-201ENST00000262101 ALDH1B1P30837 517 aa18.41■□□□□ 0.54
MSR1-201ENST00000262101 SF3B3Q15393 1217 aaKnown RBP18.41■□□□□ 0.54
MSR1-201ENST00000262101 ATF7IPQ6VMQ6 1270 aa18.41■□□□□ 0.54
MSR1-201ENST00000262101 RBM17Q96I25 401 aaKnown RBP18.41■□□□□ 0.54
MSR1-201ENST00000262101 API5Q9BZZ5 524 aaKnown RBP18.41■□□□□ 0.54
MSR1-201ENST00000262101 RCAN3Q9UKA8 241 aa18.41■□□□□ 0.54
MSR1-201ENST00000262101 CDHR2Q9BYE9 1310 aa18.41■□□□□ 0.54
MSR1-201ENST00000262101 SLX4Q8IY92 1834 aa18.41■□□□□ 0.54
MSR1-201ENST00000262101 C7orf43Q8WVR3 580 aa18.41■□□□□ 0.54
MSR1-201ENST00000262101 SEC31BQ9NQW1 1179 aa18.41■□□□□ 0.54
MSR1-201ENST00000262101 DDX60Q8IY21 1712 aaKnown RBP18.4■□□□□ 0.54
MSR1-201ENST00000262101 IPO8O15397 1037 aaKnown RBP18.4■□□□□ 0.54
MSR1-201ENST00000262101 USP44Q9H0E7 712 aa18.4■□□□□ 0.54
MSR1-201ENST00000262101 ABCC4O15439 1325 aa18.4■□□□□ 0.54
MSR1-201ENST00000262101 EPHA10Q5JZY3 1008 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms