RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 PTPRCP08575 1304 aa23.86■■□□□ 1.41
CYSTM1-201ENST00000261811 CACNA1SQ13698 1873 aa23.86■■□□□ 1.41
CYSTM1-201ENST00000261811 A0A0G2JLW4 131 aa23.85■■□□□ 1.41
CYSTM1-201ENST00000261811 GPR162Q16538 588 aa23.85■■□□□ 1.41
CYSTM1-201ENST00000261811 PELP1Q8IZL8 1130 aaKnown RBP23.85■■□□□ 1.41
CYSTM1-201ENST00000261811 MRPL50Q8N5N7 158 aaKnown RBP23.85■■□□□ 1.41
CYSTM1-201ENST00000261811 DNAAF4Q8WXU2 420 aa23.85■■□□□ 1.41
CYSTM1-201ENST00000261811 ADCY9O60503 1353 aa23.85■■□□□ 1.41
CYSTM1-201ENST00000261811 ARFGEF1Q9Y6D6 1849 aa23.85■■□□□ 1.41
CYSTM1-201ENST00000261811 NTSR2O95665 410 aa23.84■■□□□ 1.41
CYSTM1-201ENST00000261811 DPEP1P16444 411 aa23.84■■□□□ 1.41
CYSTM1-201ENST00000261811 C2CD5Q86YS7 1000 aa23.84■■□□□ 1.41
CYSTM1-201ENST00000261811 CCDC24Q8N4L8 307 aa23.84■■□□□ 1.41
CYSTM1-201ENST00000261811 CWC25Q9NXE8 425 aaPredicted RBP23.84■■□□□ 1.41
CYSTM1-201ENST00000261811 PIM2Q9P1W9 311 aa23.84■■□□□ 1.41
CYSTM1-201ENST00000261811 SH3TC1Q8TE82 1336 aa23.84■■□□□ 1.41
CYSTM1-201ENST00000261811 ERFEQ4G0M1 354 aa23.84■■□□□ 1.41
CYSTM1-201ENST00000261811 NUTM1Q86Y26 1132 aa23.84■■□□□ 1.41
CYSTM1-201ENST00000261811 RIC1Q4ADV7 1423 aa23.83■■□□□ 1.41
CYSTM1-201ENST00000261811 LAMB2P55268 1798 aa23.83■■□□□ 1.4
CYSTM1-201ENST00000261811 MYH3P11055 1940 aa23.82■■□□□ 1.4
CYSTM1-201ENST00000261811 NLRP3Q96P20 1036 aa23.82■■□□□ 1.4
CYSTM1-201ENST00000261811 BCL2L13Q9BXK5 485 aa23.82■■□□□ 1.4
CYSTM1-201ENST00000261811 COL11A2P13942 1736 aaPredicted RBP23.81■■□□□ 1.4
CYSTM1-201ENST00000261811 CHRNA5P30532 468 aa23.81■■□□□ 1.4
CYSTM1-201ENST00000261811 RARSP54136 660 aaKnown RBP23.81■■□□□ 1.4
CYSTM1-201ENST00000261811 LINS1Q8NG48 757 aa23.81■■□□□ 1.4
CYSTM1-201ENST00000261811 KIF16BQ96L93 1317 aa23.81■■□□□ 1.4
CYSTM1-201ENST00000261811 CHD4Q14839 1912 aa23.8■■□□□ 1.4
CYSTM1-201ENST00000261811 DDX60Q8IY21 1712 aaKnown RBP23.8■■□□□ 1.4
CYSTM1-201ENST00000261811 GRIN3BO60391 1043 aa23.8■■□□□ 1.4
CYSTM1-201ENST00000261811 BRPF1P55201 1214 aaPredicted RBP23.8■■□□□ 1.4
CYSTM1-201ENST00000261811 DALRD3Q5D0E6 543 aaKnown RBP23.8■■□□□ 1.4
CYSTM1-201ENST00000261811 SLC10A5Q5PT55 438 aa23.8■■□□□ 1.4
CYSTM1-201ENST00000261811 ZBTB38Q8NAP3 1195 aaPredicted RBP23.8■■□□□ 1.4
CYSTM1-201ENST00000261811 ZNF622Q969S3 477 aaKnown RBP eCLIP23.8■■□□□ 1.4
CYSTM1-201ENST00000261811 MASTLQ96GX5 879 aa23.8■■□□□ 1.4
CYSTM1-201ENST00000261811 YTHDC1Q96MU7 727 aaKnown RBP23.8■■□□□ 1.4
CYSTM1-201ENST00000261811 KLRG2A4D1S0 409 aaPredicted RBP23.78■■□□□ 1.4
CYSTM1-201ENST00000261811 IPO8O15397 1037 aaKnown RBP23.78■■□□□ 1.4
CYSTM1-201ENST00000261811 PCCAP05165 728 aaPredicted RBP23.78■■□□□ 1.4
CYSTM1-201ENST00000261811 NPR1P16066 1061 aa23.78■■□□□ 1.4
CYSTM1-201ENST00000261811 STYK1Q6J9G0 422 aa23.78■■□□□ 1.4
CYSTM1-201ENST00000261811 SLC4A10Q6U841 1118 aa23.78■■□□□ 1.4
CYSTM1-201ENST00000261811 TTLL6Q8N841 843 aa23.78■■□□□ 1.4
CYSTM1-201ENST00000261811 RPGRQ92834 1020 aaKnown RBP23.78■■□□□ 1.4
CYSTM1-201ENST00000261811 CNKSR1Q969H4 720 aa23.78■■□□□ 1.4
CYSTM1-201ENST00000261811 BCS1LQ9Y276 419 aa23.78■■□□□ 1.4
CYSTM1-201ENST00000261811 TNRC6CQ9HCJ0 1690 aaKnown RBP23.78■■□□□ 1.4
CYSTM1-201ENST00000261811 ABCC12Q96J65 1359 aa23.77■■□□□ 1.4
CYSTM1-201ENST00000261811 NEURL1BA8MQ27 555 aa23.77■■□□□ 1.4
CYSTM1-201ENST00000261811 F6X3S4 739 aa23.77■■□□□ 1.4
CYSTM1-201ENST00000261811 SRGNP10124 158 aa23.77■■□□□ 1.4
CYSTM1-201ENST00000261811 KCNA3P22001 575 aa23.77■■□□□ 1.4
CYSTM1-201ENST00000261811 ALDH1B1P30837 517 aa23.77■■□□□ 1.4
CYSTM1-201ENST00000261811 FAM89AQ96GI7 184 aa23.77■■□□□ 1.4
CYSTM1-201ENST00000261811 API5Q9BZZ5 524 aaKnown RBP23.77■■□□□ 1.4
CYSTM1-201ENST00000261811 IGKV5-2P06315 115 aa23.76■■□□□ 1.39
CYSTM1-201ENST00000261811 CWF19L2Q2TBE0 894 aaKnown RBP23.76■■□□□ 1.39
CYSTM1-201ENST00000261811 ARHGAP45Q92619 1136 aa23.75■■□□□ 1.39
CYSTM1-201ENST00000261811 RBM17Q96I25 401 aaKnown RBP23.75■■□□□ 1.39
CYSTM1-201ENST00000261811 SRCIN1Q9C0H9 1055 aa23.75■■□□□ 1.39
CYSTM1-201ENST00000261811 NOB1Q9ULX3 412 aaKnown RBP23.75■■□□□ 1.39
CYSTM1-201ENST00000261811 IRS4O14654 1257 aaPredicted RBP23.74■■□□□ 1.39
CYSTM1-201ENST00000261811 ALDH1L1O75891 902 aa23.74■■□□□ 1.39
CYSTM1-201ENST00000261811 GCKRQ14397 625 aa23.74■■□□□ 1.39
CYSTM1-201ENST00000261811 WWC3Q9ULE0 1092 aa23.74■■□□□ 1.39
CYSTM1-201ENST00000261811 HCLS1P14317 486 aaPredicted RBP23.73■■□□□ 1.39
CYSTM1-201ENST00000261811 CRY2Q49AN0 593 aa23.73■■□□□ 1.39
CYSTM1-201ENST00000261811 RTL5Q5HYW3 569 aaPredicted RBP23.73■■□□□ 1.39
CYSTM1-201ENST00000261811 BEND3Q5T5X7 828 aa23.73■■□□□ 1.39
CYSTM1-201ENST00000261811 SLX4Q8IY92 1834 aa23.72■■□□□ 1.39
CYSTM1-201ENST00000261811 CDHR2Q9BYE9 1310 aa23.72■■□□□ 1.39
CYSTM1-201ENST00000261811 YBX3P16989 372 aaKnown RBP eCLIP23.71■■□□□ 1.393e-9■■□□□ 12.1
CYSTM1-201ENST00000261811 FRAT1Q92837 279 aaPredicted RBP23.71■■□□□ 1.39
CYSTM1-201ENST00000261811 C9orf78Q9NZ63 289 aaPredicted RBP23.71■■□□□ 1.39
CYSTM1-201ENST00000261811 PDE8AO60658 829 aa23.7■■□□□ 1.38
CYSTM1-201ENST00000261811 DDX46Q7L014 1031 aaKnown RBP23.7■■□□□ 1.38
CYSTM1-201ENST00000261811 SYNE4Q8N205 404 aa23.7■■□□□ 1.38
CYSTM1-201ENST00000261811 TMX4Q9H1E5 349 aaPredicted RBP23.7■■□□□ 1.38
CYSTM1-201ENST00000261811 H7C1W4 665 aa23.69■■□□□ 1.38
CYSTM1-201ENST00000261811 BCAR3O75815 825 aa23.69■■□□□ 1.38
CYSTM1-201ENST00000261811 HOXA10P31260 410 aaPredicted RBP23.69■■□□□ 1.38
CYSTM1-201ENST00000261811 CCT4P50991 539 aaKnown RBP23.69■■□□□ 1.38
CYSTM1-201ENST00000261811 SOGA3Q5TF21 947 aa23.69■■□□□ 1.38
CYSTM1-201ENST00000261811 UBE3BQ7Z3V4 1068 aa23.69■■□□□ 1.38
CYSTM1-201ENST00000261811 CRAMP1Q96RY5 1269 aa23.69■■□□□ 1.38
CYSTM1-201ENST00000261811 SF3B3Q15393 1217 aaKnown RBP23.67■■□□□ 1.38
CYSTM1-201ENST00000261811 CCDC152Q4G0S7 254 aa23.67■■□□□ 1.38
CYSTM1-201ENST00000261811 ZKSCAN2Q63HK3 967 aa23.67■■□□□ 1.38
CYSTM1-201ENST00000261811 PRPF40BQ6NWY9 871 aaKnown RBP23.67■■□□□ 1.38
CYSTM1-201ENST00000261811 TAF1P21675 1872 aa23.67■■□□□ 1.38
CYSTM1-201ENST00000261811 CCDC88AQ3V6T2 1871 aa23.67■■□□□ 1.38
CYSTM1-201ENST00000261811 GRM8O00222 908 aa23.66■■□□□ 1.38
CYSTM1-201ENST00000261811 ATF7IPQ6VMQ6 1270 aa23.66■■□□□ 1.38
CYSTM1-201ENST00000261811 ARHGAP27Q6ZUM4 889 aa23.65■■□□□ 1.38
CYSTM1-201ENST00000261811 JARID2Q92833 1246 aaPredicted RBP23.65■■□□□ 1.38
CYSTM1-201ENST00000261811 FER1L6Q2WGJ9 1857 aa23.65■■□□□ 1.38
CYSTM1-201ENST00000261811 RCAN3Q9UKA8 241 aa23.64■■□□□ 1.38
CYSTM1-201ENST00000261811 HDAC5Q9UQL6 1122 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 432.9 ms