RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 PDRG1Q9NUG6 133 aa17.33■□□□□ 0.37
SFSWAP-201ENST00000261674 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.33■□□□□ 0.36
SFSWAP-201ENST00000261674 FAM177BA6PVY3 158 aa17.33■□□□□ 0.36
SFSWAP-201ENST00000261674 BTBD11A6QL63 1104 aa17.33■□□□□ 0.36
SFSWAP-201ENST00000261674 LSG1Q9H089 658 aaKnown RBP17.33■□□□□ 0.36
SFSWAP-201ENST00000261674 ZNF330Q9Y3S2 320 aaPredicted RBP17.33■□□□□ 0.36
SFSWAP-201ENST00000261674 PTCD1O75127 700 aaKnown RBP17.32■□□□□ 0.36
SFSWAP-201ENST00000261674 AACSQ86V21 672 aa17.32■□□□□ 0.36
SFSWAP-201ENST00000261674 TCHHQ07283 1943 aa17.32■□□□□ 0.36
SFSWAP-201ENST00000261674 CYP27B1O15528 508 aa17.32■□□□□ 0.36
SFSWAP-201ENST00000261674 HTATSF1O43719 755 aaKnown RBP17.32■□□□□ 0.36
SFSWAP-201ENST00000261674 CCDC183Q5T5S1 534 aa17.32■□□□□ 0.36
SFSWAP-201ENST00000261674 STK3Q13188 491 aa17.32■□□□□ 0.36
SFSWAP-201ENST00000261674 CAMK4Q16566 473 aa17.31■□□□□ 0.36
SFSWAP-201ENST00000261674 MAP3K2Q9Y2U5 619 aa17.31■□□□□ 0.36
SFSWAP-201ENST00000261674 LTBP4Q8N2S1 1624 aa17.31■□□□□ 0.36
SFSWAP-201ENST00000261674 LTN1O94822 1766 aa17.31■□□□□ 0.36
SFSWAP-201ENST00000261674 GLRX3O76003 335 aaKnown RBP17.31■□□□□ 0.36
SFSWAP-201ENST00000261674 F13A1P00488 732 aa17.31■□□□□ 0.36
SFSWAP-201ENST00000261674 ACSBG1Q96GR2 724 aa17.31■□□□□ 0.36
SFSWAP-201ENST00000261674 EIF4A1P60842 406 aaKnown RBP17.3■□□□□ 0.36
SFSWAP-201ENST00000261674 RUFY2Q8WXA3 655 aa17.3■□□□□ 0.36
SFSWAP-201ENST00000261674 CYP46A1Q9Y6A2 500 aa17.3■□□□□ 0.36
SFSWAP-201ENST00000261674 GOLGB1Q14789 3259 aaKnown RBP17.3■□□□□ 0.36
SFSWAP-201ENST00000261674 ROBO1Q9Y6N7 1651 aa17.3■□□□□ 0.36
SFSWAP-201ENST00000261674 BEND3Q5T5X7 828 aa17.3■□□□□ 0.36
SFSWAP-201ENST00000261674 BOLA2Q9H3K6 86 aa17.3■□□□□ 0.36
SFSWAP-201ENST00000261674 RGPD2P0DJD1 1756 aa17.3■□□□□ 0.36
SFSWAP-201ENST00000261674 KDRP35968 1356 aa17.3■□□□□ 0.36
SFSWAP-201ENST00000261674 ZKSCAN1P17029 563 aaPredicted RBP17.29■□□□□ 0.36
SFSWAP-201ENST00000261674 PROSER3Q2NL68 480 aa17.29■□□□□ 0.36
SFSWAP-201ENST00000261674 FAM227BQ96M60 508 aa17.29■□□□□ 0.36
SFSWAP-201ENST00000261674 ATP6V1DQ9Y5K8 247 aa17.29■□□□□ 0.36
SFSWAP-201ENST00000261674 UBE2HP62256 183 aa17.29■□□□□ 0.36
SFSWAP-201ENST00000261674 FAM98CQ17RN3 349 aaKnown RBP17.29■□□□□ 0.36
SFSWAP-201ENST00000261674 HSP90AB4PQ58FF6 505 aa17.29■□□□□ 0.36
SFSWAP-201ENST00000261674 KLHDC4Q8TBB5 520 aa17.29■□□□□ 0.36
SFSWAP-201ENST00000261674 TFIP11Q9UBB9 837 aaKnown RBP17.29■□□□□ 0.36
SFSWAP-201ENST00000261674 MARF1Q9Y4F3 1742 aaKnown RBP17.29■□□□□ 0.36
SFSWAP-201ENST00000261674 RGPD5Q99666 1765 aa17.29■□□□□ 0.36
SFSWAP-201ENST00000261674 RNMTO43148 476 aaKnown RBP17.28■□□□□ 0.36
SFSWAP-201ENST00000261674 LARP1BQ659C4 914 aaKnown RBP17.28■□□□□ 0.36
SFSWAP-201ENST00000261674 WDR17Q8IZU2 1322 aa17.28■□□□□ 0.36
SFSWAP-201ENST00000261674 CAMTA1Q9Y6Y1 1673 aa17.28■□□□□ 0.36
SFSWAP-201ENST00000261674 POLA2Q14181 598 aa17.28■□□□□ 0.36
SFSWAP-201ENST00000261674 ZCRB1Q8TBF4 217 aaKnown RBP17.28■□□□□ 0.36
SFSWAP-201ENST00000261674 TTC14Q96N46 770 aa17.28■□□□□ 0.36
SFSWAP-201ENST00000261674 ECHDC1Q9NTX5 307 aa17.28■□□□□ 0.36
SFSWAP-201ENST00000261674 RPAP1Q9BWH6 1393 aaPredicted RBP17.28■□□□□ 0.36
SFSWAP-201ENST00000261674 GOLGA6L4A6NEF3 574 aa17.28■□□□□ 0.36
SFSWAP-201ENST00000261674 COL9A3Q14050 684 aaPredicted RBP17.28■□□□□ 0.36
SFSWAP-201ENST00000261674 GPATCH3Q96I76 525 aa17.28■□□□□ 0.36
SFSWAP-201ENST00000261674 TRPM3Q9HCF6 1732 aaPredicted RBP17.28■□□□□ 0.36
SFSWAP-201ENST00000261674 MCM5P33992 734 aa17.27■□□□□ 0.36
SFSWAP-201ENST00000261674 SRCAPQ6ZRS2 3230 aa17.27■□□□□ 0.36
SFSWAP-201ENST00000261674 IL2RBP14784 551 aa17.27■□□□□ 0.36
SFSWAP-201ENST00000261674 AKAP4Q5JQC9 854 aa17.27■□□□□ 0.36
SFSWAP-201ENST00000261674 HYPKQ9NX55 129 aa17.27■□□□□ 0.36
SFSWAP-201ENST00000261674 G3BP1Q13283 466 aaKnown RBP eCLIP17.26■□□□□ 0.35
SFSWAP-201ENST00000261674 SASS6Q6UVJ0 657 aa17.26■□□□□ 0.35
SFSWAP-201ENST00000261674 BCL11BQ9C0K0 894 aaPredicted RBP17.26■□□□□ 0.35
SFSWAP-201ENST00000261674 MEGF6O75095 1541 aa17.26■□□□□ 0.35
SFSWAP-201ENST00000261674 FOSBP53539 338 aa17.26■□□□□ 0.35
SFSWAP-201ENST00000261674 ME3Q16798 604 aa17.26■□□□□ 0.35
SFSWAP-201ENST00000261674 CKAP2LQ8IYA6 745 aa17.26■□□□□ 0.35
SFSWAP-201ENST00000261674 FSD1Q9BTV5 496 aa17.26■□□□□ 0.35
SFSWAP-201ENST00000261674 RBM8AQ9Y5S9 174 aaKnown RBP17.26■□□□□ 0.35
SFSWAP-201ENST00000261674 PHKG2P15735 406 aa17.26■□□□□ 0.35
SFSWAP-201ENST00000261674 FAM184AQ8NB25 1140 aa17.26■□□□□ 0.35
SFSWAP-201ENST00000261674 AOX1Q06278 1338 aa17.26■□□□□ 0.35
SFSWAP-201ENST00000261674 MYL6BP14649 208 aa17.25■□□□□ 0.35
SFSWAP-201ENST00000261674 CABP4P57796 275 aa17.25■□□□□ 0.35
SFSWAP-201ENST00000261674 NOLC1Q14978 699 aaKnown RBP eCLIP17.25■□□□□ 0.35
SFSWAP-201ENST00000261674 EDC3Q96F86 508 aaKnown RBP17.25■□□□□ 0.35
SFSWAP-201ENST00000261674 NDUFB9Q9Y6M9 179 aa17.25■□□□□ 0.35
SFSWAP-201ENST00000261674 KIF1AQ12756 1690 aa17.25■□□□□ 0.35
SFSWAP-201ENST00000261674 AMOTQ4VCS5 1084 aa17.25■□□□□ 0.35
SFSWAP-201ENST00000261674 PKNOX2Q96KN3 472 aa17.25■□□□□ 0.35
SFSWAP-201ENST00000261674 MTMR6Q9Y217 621 aa17.25■□□□□ 0.35
SFSWAP-201ENST00000261674 KCNQ4P56696 695 aa17.25■□□□□ 0.35
SFSWAP-201ENST00000261674 IFNL2Q8IZJ0 200 aa17.25■□□□□ 0.35
SFSWAP-201ENST00000261674 PPFIA3O75145 1194 aa17.24■□□□□ 0.35
SFSWAP-201ENST00000261674 DRC7Q8IY82 874 aa17.24■□□□□ 0.35
SFSWAP-201ENST00000261674 DBF4Q9UBU7 674 aaPredicted RBP17.24■□□□□ 0.35
SFSWAP-201ENST00000261674 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.24■□□□□ 0.35
SFSWAP-201ENST00000261674 NMIQ13287 307 aaPredicted RBP17.24■□□□□ 0.35
SFSWAP-201ENST00000261674 TLR7Q9NYK1 1049 aaKnown RBP17.23■□□□□ 0.35
SFSWAP-201ENST00000261674 TPCN1Q9ULQ1 816 aa17.23■□□□□ 0.35
SFSWAP-201ENST00000261674 CEBPZQ03701 1054 aaKnown RBP17.23■□□□□ 0.35
SFSWAP-201ENST00000261674 KDM4AO75164 1064 aa17.23■□□□□ 0.35
SFSWAP-201ENST00000261674 CREB3L3Q68CJ9 461 aa17.23■□□□□ 0.35
SFSWAP-201ENST00000261674 NAP1L2Q9ULW6 460 aaPredicted RBP17.23■□□□□ 0.35
SFSWAP-201ENST00000261674 RIC3Q7Z5B4 369 aa17.22■□□□□ 0.35
SFSWAP-201ENST00000261674 EAF2Q96CJ1 260 aaPredicted RBP17.22■□□□□ 0.35
SFSWAP-201ENST00000261674 SLIT3O75094 1523 aa17.22■□□□□ 0.35
SFSWAP-201ENST00000261674 FGD1P98174 961 aa17.22■□□□□ 0.35
SFSWAP-201ENST00000261674 CDC37L1Q7L3B6 337 aa17.22■□□□□ 0.35
SFSWAP-201ENST00000261674 TAF6LQ9Y6J9 622 aa17.22■□□□□ 0.35
SFSWAP-201ENST00000261674 ALS2Q96Q42 1657 aa17.21■□□□□ 0.35
SFSWAP-201ENST00000261674 BICC1Q9H694 974 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms