RNA–Protein interactions for RNA: ENST00000260649.10

SLC3A1-201, Transcript of solute carrier family 3 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC3A1, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-201ENST00000260649 TMEM63CQ9P1W3 806 aa13.65□□□□□ -0.22
SLC3A1-201ENST00000260649 SPATA31A3Q5VYP0 1347 aa13.65□□□□□ -0.22
SLC3A1-201ENST00000260649 PRIM1P49642 420 aaKnown RBP13.65□□□□□ -0.22
SLC3A1-201ENST00000260649 TTLL7Q6ZT98 887 aa13.65□□□□□ -0.22
SLC3A1-201ENST00000260649 ZBTB3Q9H5J0 574 aa13.65□□□□□ -0.22
SLC3A1-201ENST00000260649 RBM8AQ9Y5S9 174 aaKnown RBP13.65□□□□□ -0.22
SLC3A1-201ENST00000260649 NECAB1Q8N987 351 aa13.65□□□□□ -0.22
SLC3A1-201ENST00000260649 OVOS2A0A0G2JMS6 1433 aa13.64□□□□□ -0.23
SLC3A1-201ENST00000260649 GADD45BO75293 160 aaPredicted RBP13.64□□□□□ -0.23
SLC3A1-201ENST00000260649 PDRG1Q9NUG6 133 aa13.64□□□□□ -0.23
SLC3A1-201ENST00000260649 TAF6LQ9Y6J9 622 aa13.64□□□□□ -0.23
SLC3A1-201ENST00000260649 C5P01031 1676 aa13.64□□□□□ -0.23
SLC3A1-201ENST00000260649 USP42Q9H9J4 1324 aaKnown RBP13.64□□□□□ -0.23
SLC3A1-201ENST00000260649 BRINP3Q76B58 766 aa13.64□□□□□ -0.23
SLC3A1-201ENST00000260649 RNF214Q8ND24 703 aa13.64□□□□□ -0.23
SLC3A1-201ENST00000260649 TTC14Q96N46 770 aa13.64□□□□□ -0.23
SLC3A1-201ENST00000260649 TNS3Q68CZ2 1445 aa13.64□□□□□ -0.23
SLC3A1-201ENST00000260649 LMBR1LQ6UX01 489 aa13.63□□□□□ -0.23
SLC3A1-201ENST00000260649 INTS4Q96HW7 963 aaKnown RBP13.63□□□□□ -0.23
SLC3A1-201ENST00000260649 RBSNQ9H1K0 784 aa13.63□□□□□ -0.23
SLC3A1-201ENST00000260649 LIMCH1Q9UPQ0 1083 aa13.63□□□□□ -0.23
SLC3A1-201ENST00000260649 UTYO14607 1347 aa13.63□□□□□ -0.23
SLC3A1-201ENST00000260649 CCDC171Q6TFL3 1326 aa13.63□□□□□ -0.23
SLC3A1-201ENST00000260649 ALS2Q96Q42 1657 aa13.63□□□□□ -0.23
SLC3A1-201ENST00000260649 ZNF589Q86UQ0 364 aaPredicted RBP13.63□□□□□ -0.23
SLC3A1-201ENST00000260649 CCDC85AQ96PX6 553 aaPredicted RBP13.63□□□□□ -0.23
SLC3A1-201ENST00000260649 SMC3Q9UQE7 1217 aa13.63□□□□□ -0.23
SLC3A1-201ENST00000260649 KIF1AQ12756 1690 aa13.63□□□□□ -0.23
SLC3A1-201ENST00000260649 NBPF26B4DH59 902 aa13.62□□□□□ -0.23
SLC3A1-201ENST00000260649 PTPN12Q05209 780 aaKnown RBP13.62□□□□□ -0.23
SLC3A1-201ENST00000260649 NBPF14Q5TI25 921 aa13.62□□□□□ -0.23
SLC3A1-201ENST00000260649 NBPF10Q6P3W6 841 aaKnown RBP13.62□□□□□ -0.23
SLC3A1-201ENST00000260649 LRP10Q7Z4F1 713 aa13.62□□□□□ -0.23
SLC3A1-201ENST00000260649 NBPF15Q8N660 670 aa13.62□□□□□ -0.23
SLC3A1-201ENST00000260649 ZCRB1Q8TBF4 217 aaKnown RBP13.62□□□□□ -0.23
SLC3A1-201ENST00000260649 NEUROD6Q96NK8 337 aa13.62□□□□□ -0.23
SLC3A1-201ENST00000260649 STRCP1A6NGW2 1772 aa13.62□□□□□ -0.23
SLC3A1-201ENST00000260649 SLFNL1Q499Z3 407 aa13.62□□□□□ -0.23
SLC3A1-201ENST00000260649 CREB3L3Q68CJ9 461 aa13.62□□□□□ -0.23
SLC3A1-201ENST00000260649 CCDC129Q6ZRS4 1044 aa13.62□□□□□ -0.23
SLC3A1-201ENST00000260649 DBNDD2Q9BQY9 259 aa13.62□□□□□ -0.23
SLC3A1-201ENST00000260649 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.62□□□□□ -0.23
SLC3A1-201ENST00000260649 DBNLQ9UJU6 430 aaKnown RBP13.62□□□□□ -0.23
SLC3A1-201ENST00000260649 CYP46A1Q9Y6A2 500 aa13.62□□□□□ -0.23
SLC3A1-201ENST00000260649 ERBB4Q15303 1308 aa13.62□□□□□ -0.23
SLC3A1-201ENST00000260649 SEC62Q99442 399 aaKnown RBP13.62□□□□□ -0.23
SLC3A1-201ENST00000260649 ISY1Q9ULR0 285 aaKnown RBP13.62□□□□□ -0.23
SLC3A1-201ENST00000260649 CNPY2Q9Y2B0 182 aa13.62□□□□□ -0.23
SLC3A1-201ENST00000260649 SIPA1L3O60292 1781 aaPredicted RBP13.61□□□□□ -0.23
SLC3A1-201ENST00000260649 ZKSCAN1P17029 563 aaPredicted RBP13.61□□□□□ -0.23
SLC3A1-201ENST00000260649 DDX46Q7L014 1031 aaKnown RBP13.61□□□□□ -0.23
SLC3A1-201ENST00000260649 USP48Q86UV5 1035 aa13.61□□□□□ -0.23
SLC3A1-201ENST00000260649 ANP32BQ92688 251 aaKnown RBP13.61□□□□□ -0.23
SLC3A1-201ENST00000260649 SYT1P21579 422 aa13.61□□□□□ -0.23
SLC3A1-201ENST00000260649 EVA1CP58658 441 aa13.61□□□□□ -0.23
SLC3A1-201ENST00000260649 STK3Q13188 491 aa13.61□□□□□ -0.23
SLC3A1-201ENST00000260649 ZNF594Q96JF6 807 aaPredicted RBP13.61□□□□□ -0.23
SLC3A1-201ENST00000260649 WDR33Q9C0J8 1336 aaKnown RBP13.61□□□□□ -0.23
SLC3A1-201ENST00000260649 VPS37CA5D8V6 355 aaPredicted RBP13.6□□□□□ -0.23
SLC3A1-201ENST00000260649 TNNI3KQ59H18 835 aa13.6□□□□□ -0.23
SLC3A1-201ENST00000260649 FPGT-TNNI3KV9GXZ4 949 aa13.6□□□□□ -0.23
SLC3A1-201ENST00000260649 RPAP1Q9BWH6 1393 aaPredicted RBP13.6□□□□□ -0.23
SLC3A1-201ENST00000260649 FIBPO43427 364 aa13.6□□□□□ -0.23
SLC3A1-201ENST00000260649 GJB2P29033 226 aa13.6□□□□□ -0.23
SLC3A1-201ENST00000260649 NECTIN1Q15223 517 aa13.6□□□□□ -0.23
SLC3A1-201ENST00000260649 SCN11AQ9UI33 1791 aa13.6□□□□□ -0.23
SLC3A1-201ENST00000260649 CAMTA1Q9Y6Y1 1673 aa13.6□□□□□ -0.23
SLC3A1-201ENST00000260649 SLC27A2O14975 620 aa13.59□□□□□ -0.23
SLC3A1-201ENST00000260649 RFX5P48382 616 aaPredicted RBP13.59□□□□□ -0.23
SLC3A1-201ENST00000260649 ZNF445P59923 1031 aa13.59□□□□□ -0.23
SLC3A1-201ENST00000260649 STX6O43752 255 aa13.59□□□□□ -0.23
SLC3A1-201ENST00000260649 TIMM10P62072 90 aa13.59□□□□□ -0.23
SLC3A1-201ENST00000260649 ME3Q16798 604 aa13.59□□□□□ -0.23
SLC3A1-201ENST00000260649 PLBD2Q8NHP8 589 aa13.59□□□□□ -0.23
SLC3A1-201ENST00000260649 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.59□□□□□ -0.23
SLC3A1-201ENST00000260649 ESPNB1AK53 854 aa13.58□□□□□ -0.24
SLC3A1-201ENST00000260649 FERMT3Q86UX7 667 aa13.58□□□□□ -0.24
SLC3A1-201ENST00000260649 KAT6BQ8WYB5 2073 aa13.58□□□□□ -0.24
SLC3A1-201ENST00000260649 ZNF335Q9H4Z2 1342 aaPredicted RBP13.58□□□□□ -0.24
SLC3A1-201ENST00000260649 ZSCAN22P10073 491 aaPredicted RBP13.58□□□□□ -0.24
SLC3A1-201ENST00000260649 MAP4K1Q92918 833 aa13.58□□□□□ -0.24
SLC3A1-201ENST00000260649 ZSWIM6Q9HCJ5 1215 aa13.58□□□□□ -0.24
SLC3A1-201ENST00000260649 COPRSQ9NQ92 184 aa13.58□□□□□ -0.24
SLC3A1-201ENST00000260649 TPCN1Q9ULQ1 816 aa13.58□□□□□ -0.24
SLC3A1-201ENST00000260649 EPB41L2O43491 1005 aaKnown RBP13.57□□□□□ -0.24
SLC3A1-201ENST00000260649 SLAIN2Q9P270 581 aa13.57□□□□□ -0.24
SLC3A1-201ENST00000260649 WDR17Q8IZU2 1322 aa13.57□□□□□ -0.24
SLC3A1-201ENST00000260649 A0A0G2JS52 829 aa13.57□□□□□ -0.24
SLC3A1-201ENST00000260649 LRRC24Q50LG9 513 aa13.57□□□□□ -0.24
SLC3A1-201ENST00000260649 IL17RAQ96F46 866 aa13.57□□□□□ -0.24
SLC3A1-201ENST00000260649 LRRC2Q9BYS8 371 aa13.57□□□□□ -0.24
SLC3A1-201ENST00000260649 COL18A1P39060 1754 aa13.57□□□□□ -0.24
SLC3A1-201ENST00000260649 TCHHQ07283 1943 aa13.57□□□□□ -0.24
SLC3A1-201ENST00000260649 ST3GAL1Q11201 340 aa13.56□□□□□ -0.24
SLC3A1-201ENST00000260649 VPS53Q5VIR6 699 aa13.56□□□□□ -0.24
SLC3A1-201ENST00000260649 FAM173BQ6P4H8 233 aa13.56□□□□□ -0.24
SLC3A1-201ENST00000260649 BLOC1S2Q6QNY1 142 aa13.56□□□□□ -0.24
SLC3A1-201ENST00000260649 PCDH11XQ9BZA7 1347 aa13.56□□□□□ -0.24
SLC3A1-201ENST00000260649 PCDH11YQ9BZA8 1340 aa13.56□□□□□ -0.24
SLC3A1-201ENST00000260649 HIP1O00291 1037 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms