RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 SOS2Q07890 1332 aaPredicted RBP17.66■□□□□ 0.42
TRAFD1-201ENST00000257604 DBNDD2Q9BQY9 259 aa17.66■□□□□ 0.42
TRAFD1-201ENST00000257604 SNRKQ9NRH2 765 aa17.66■□□□□ 0.42
TRAFD1-201ENST00000257604 HDAC5Q9UQL6 1122 aa17.66■□□□□ 0.42
TRAFD1-201ENST00000257604 CASTP20810 708 aaKnown RBP17.66■□□□□ 0.42
TRAFD1-201ENST00000257604 CAMTA1Q9Y6Y1 1673 aa17.66■□□□□ 0.42
TRAFD1-201ENST00000257604 GLIPR1L2Q4G1C9 344 aa17.65■□□□□ 0.42
TRAFD1-201ENST00000257604 CARD10Q9BWT7 1032 aa17.65■□□□□ 0.42
TRAFD1-201ENST00000257604 DDX49Q9Y6V7 483 aaKnown RBP17.65■□□□□ 0.42
TRAFD1-201ENST00000257604 FAM208AQ9UK61 1670 aaKnown RBP17.65■□□□□ 0.42
TRAFD1-201ENST00000257604 NCAPD2Q15021 1401 aa17.65■□□□□ 0.42
TRAFD1-201ENST00000257604 PPFIA3O75145 1194 aa17.65■□□□□ 0.42
TRAFD1-201ENST00000257604 PRIM1P49642 420 aaKnown RBP17.65■□□□□ 0.42
TRAFD1-201ENST00000257604 ERC1Q8IUD2 1116 aa17.65■□□□□ 0.42
TRAFD1-201ENST00000257604 DDIT3P35638 169 aa17.65■□□□□ 0.42
TRAFD1-201ENST00000257604 CCDC129Q6ZRS4 1044 aa17.65■□□□□ 0.42
TRAFD1-201ENST00000257604 GDPD2Q9HCC8 539 aa17.65■□□□□ 0.42
TRAFD1-201ENST00000257604 NAP1L2Q9ULW6 460 aaPredicted RBP17.65■□□□□ 0.42
TRAFD1-201ENST00000257604 NMIQ13287 307 aaPredicted RBP17.64■□□□□ 0.41
TRAFD1-201ENST00000257604 GORABQ5T7V8 394 aa17.64■□□□□ 0.41
TRAFD1-201ENST00000257604 PLBD2Q8NHP8 589 aa17.64■□□□□ 0.41
TRAFD1-201ENST00000257604 JAKMIP1Q96N16 626 aaKnown RBP17.64■□□□□ 0.41
TRAFD1-201ENST00000257604 EXOC5O00471 708 aa17.64■□□□□ 0.41
TRAFD1-201ENST00000257604 LRRC24Q50LG9 513 aa17.64■□□□□ 0.41
TRAFD1-201ENST00000257604 PUS3Q9BZE2 481 aaKnown RBP17.64■□□□□ 0.41
TRAFD1-201ENST00000257604 CWC25Q9NXE8 425 aaPredicted RBP17.64■□□□□ 0.41
TRAFD1-201ENST00000257604 GOLGB1Q14789 3259 aaKnown RBP17.64■□□□□ 0.41
TRAFD1-201ENST00000257604 SEC62Q99442 399 aaKnown RBP17.63■□□□□ 0.41
TRAFD1-201ENST00000257604 GOLGA6L22H0YM25 854 aa17.63■□□□□ 0.41
TRAFD1-201ENST00000257604 SGSM2O43147 1006 aa17.63■□□□□ 0.41
TRAFD1-201ENST00000257604 PRPF40AO75400 957 aaKnown RBP17.63■□□□□ 0.41
TRAFD1-201ENST00000257604 RAB3GAP1Q15042 981 aa17.63■□□□□ 0.41
TRAFD1-201ENST00000257604 LRRC37A3O60309 1634 aa17.63■□□□□ 0.41
TRAFD1-201ENST00000257604 PTPN12Q05209 780 aaKnown RBP17.62■□□□□ 0.41
TRAFD1-201ENST00000257604 HSP90AB3PQ58FF7 597 aa17.62■□□□□ 0.41
TRAFD1-201ENST00000257604 SMIM5Q71RC9 77 aa17.62■□□□□ 0.41
TRAFD1-201ENST00000257604 HEG1Q9ULI3 1381 aa17.62■□□□□ 0.41
TRAFD1-201ENST00000257604 TRPM3Q9HCF6 1732 aaPredicted RBP17.62■□□□□ 0.41
TRAFD1-201ENST00000257604 FKBP4Q02790 459 aaKnown RBP eCLIP17.62■□□□□ 0.41
TRAFD1-201ENST00000257604 STK3Q13188 491 aa17.62■□□□□ 0.41
TRAFD1-201ENST00000257604 ADCK5Q3MIX3 580 aa17.62■□□□□ 0.41
TRAFD1-201ENST00000257604 FAM182BQ5T319 152 aa17.62■□□□□ 0.41
TRAFD1-201ENST00000257604 DBNLQ9UJU6 430 aaKnown RBP17.62■□□□□ 0.41
TRAFD1-201ENST00000257604 LMTK3Q96Q04 1460 aa17.62■□□□□ 0.41
TRAFD1-201ENST00000257604 A0A0D9SFI3 127 aa17.61■□□□□ 0.41
TRAFD1-201ENST00000257604 COL9A3Q14050 684 aaPredicted RBP17.61■□□□□ 0.41
TRAFD1-201ENST00000257604 GOLIM4O00461 696 aa17.61■□□□□ 0.41
TRAFD1-201ENST00000257604 CAVIN1Q6NZI2 390 aaKnown RBP17.61■□□□□ 0.41
TRAFD1-201ENST00000257604 RUFY2Q8WXA3 655 aa17.6■□□□□ 0.41
TRAFD1-201ENST00000257604 RBM27Q9P2N5 1060 aaKnown RBP17.6■□□□□ 0.41
TRAFD1-201ENST00000257604 SNX14Q9Y5W7 946 aa17.6■□□□□ 0.41
TRAFD1-201ENST00000257604 ERVV-2B6SEH9 535 aa17.6■□□□□ 0.41
TRAFD1-201ENST00000257604 BAG4O95429 457 aaKnown RBP17.6■□□□□ 0.41
TRAFD1-201ENST00000257604 KIF6Q6ZMV9 814 aa17.6■□□□□ 0.41
TRAFD1-201ENST00000257604 HLFQ16534 295 aa17.59■□□□□ 0.41
TRAFD1-201ENST00000257604 NECAB1Q8N987 351 aa17.59■□□□□ 0.41
TRAFD1-201ENST00000257604 FOSBP53539 338 aa17.59■□□□□ 0.41
TRAFD1-201ENST00000257604 MTX1Q13505 466 aa17.59■□□□□ 0.41
TRAFD1-201ENST00000257604 TNNI3KQ59H18 835 aa17.59■□□□□ 0.41
TRAFD1-201ENST00000257604 LRP10Q7Z4F1 713 aa17.59■□□□□ 0.41
TRAFD1-201ENST00000257604 FPGT-TNNI3KV9GXZ4 949 aa17.59■□□□□ 0.41
TRAFD1-201ENST00000257604 NASPP49321 788 aaPredicted RBP17.59■□□□□ 0.41
TRAFD1-201ENST00000257604 EVI5LQ96CN4 794 aa17.59■□□□□ 0.41
TRAFD1-201ENST00000257604 LRRC2Q9BYS8 371 aa17.59■□□□□ 0.41
TRAFD1-201ENST00000257604 DCCP43146 1447 aa17.58■□□□□ 0.41
TRAFD1-201ENST00000257604 FGD1P98174 961 aa17.58■□□□□ 0.4
TRAFD1-201ENST00000257604 CCDC57Q2TAC2 916 aa17.58■□□□□ 0.4
TRAFD1-201ENST00000257604 ZNF589Q86UQ0 364 aaPredicted RBP17.58■□□□□ 0.4
TRAFD1-201ENST00000257604 CCDC83Q8IWF9 413 aa17.58■□□□□ 0.4
TRAFD1-201ENST00000257604 TAF6LQ9Y6J9 622 aa17.58■□□□□ 0.4
TRAFD1-201ENST00000257604 AK2P54819 239 aa17.58■□□□□ 0.4
TRAFD1-201ENST00000257604 HELBQ8NG08 1087 aaPredicted RBP17.58■□□□□ 0.4
TRAFD1-201ENST00000257604 ATG3Q9NT62 314 aa17.58■□□□□ 0.4
TRAFD1-201ENST00000257604 ZBTB1Q9Y2K1 713 aa17.58■□□□□ 0.4
TRAFD1-201ENST00000257604 RBM8AQ9Y5S9 174 aaKnown RBP17.58■□□□□ 0.4
TRAFD1-201ENST00000257604 COL5A2P05997 1499 aaPredicted RBP17.57■□□□□ 0.4
TRAFD1-201ENST00000257604 KIF1AQ12756 1690 aa17.57■□□□□ 0.4
TRAFD1-201ENST00000257604 STARD3NLO95772 234 aa17.57■□□□□ 0.4
TRAFD1-201ENST00000257604 LSG1Q9H089 658 aaKnown RBP17.57■□□□□ 0.4
TRAFD1-201ENST00000257604 CPDO75976 1380 aa17.57■□□□□ 0.4
TRAFD1-201ENST00000257604 TTC41PQ6P2S7 1318 aa17.57■□□□□ 0.4
TRAFD1-201ENST00000257604 PXDNLA1KZ92 1463 aa17.57■□□□□ 0.4
TRAFD1-201ENST00000257604 NCOA3Q9Y6Q9 1424 aa17.57■□□□□ 0.4
TRAFD1-201ENST00000257604 RNF214Q8ND24 703 aa17.56■□□□□ 0.4
TRAFD1-201ENST00000257604 OVOS2A0A0G2JMS6 1433 aa17.56■□□□□ 0.4
TRAFD1-201ENST00000257604 HSPA4P34932 840 aa17.56■□□□□ 0.4
TRAFD1-201ENST00000257604 ZKSCAN1P17029 563 aaPredicted RBP17.56■□□□□ 0.4
TRAFD1-201ENST00000257604 BICDL1Q6ZP65 573 aa17.55■□□□□ 0.4
TRAFD1-201ENST00000257604 TRMT112Q9UI30 125 aaKnown RBP17.55■□□□□ 0.4
TRAFD1-201ENST00000257604 ALS2Q96Q42 1657 aa17.55■□□□□ 0.4
TRAFD1-201ENST00000257604 RAD50Q92878 1312 aa17.55■□□□□ 0.4
TRAFD1-201ENST00000257604 LMO7Q8WWI1 1683 aa17.55■□□□□ 0.4
TRAFD1-201ENST00000257604 SNAP23O00161 211 aa17.55■□□□□ 0.4
TRAFD1-201ENST00000257604 NUCB2P80303 420 aa17.55■□□□□ 0.4
TRAFD1-201ENST00000257604 FAM13BQ9NYF5 915 aa17.55■□□□□ 0.4
TRAFD1-201ENST00000257604 CIZ1Q9ULV3 898 aaPredicted RBP17.55■□□□□ 0.4
TRAFD1-201ENST00000257604 R3HCC1Q9Y3T6 440 aaKnown RBP17.55■□□□□ 0.4
TRAFD1-201ENST00000257604 PI16Q6UXB8 463 aa17.54■□□□□ 0.4
TRAFD1-201ENST00000257604 C8orf37Q96NL8 207 aa17.54■□□□□ 0.4
TRAFD1-201ENST00000257604 LARGE1O95461 756 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms