RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.52■□□□□ 0.4
MSI1-201ENST00000257552 HYPKQ9NX55 129 aa17.52■□□□□ 0.4
MSI1-201ENST00000257552 SMTNL1A8MU46 457 aa17.52■□□□□ 0.4
MSI1-201ENST00000257552 ZNF530Q6P9A1 599 aaPredicted RBP17.52■□□□□ 0.4
MSI1-201ENST00000257552 IL17RAQ96F46 866 aa17.52■□□□□ 0.4
MSI1-201ENST00000257552 PHAXQ9H814 394 aaKnown RBP17.52■□□□□ 0.4
MSI1-201ENST00000257552 PDRG1Q9NUG6 133 aa17.52■□□□□ 0.4
MSI1-201ENST00000257552 TFIP11Q9UBB9 837 aaKnown RBP17.52■□□□□ 0.4
MSI1-201ENST00000257552 PRPF40BQ6NWY9 871 aaKnown RBP17.52■□□□□ 0.39
MSI1-201ENST00000257552 DACT1Q9NYF0 836 aa17.52■□□□□ 0.39
MSI1-201ENST00000257552 ZSCAN25Q6NSZ9 544 aa17.51■□□□□ 0.39
MSI1-201ENST00000257552 KCNH5Q8NCM2 988 aa17.51■□□□□ 0.39
MSI1-201ENST00000257552 TNMDQ9H2S6 317 aa17.51■□□□□ 0.39
MSI1-201ENST00000257552 CHD2O14647 1828 aaKnown RBP17.51■□□□□ 0.39
MSI1-201ENST00000257552 GOLGA6L4A6NEF3 574 aa17.51■□□□□ 0.39
MSI1-201ENST00000257552 HDGFL1Q5TGJ6 251 aa17.51■□□□□ 0.39
MSI1-201ENST00000257552 LARP1BQ659C4 914 aaKnown RBP17.51■□□□□ 0.39
MSI1-201ENST00000257552 ANKRD24Q8TF21 1146 aa17.5■□□□□ 0.39
MSI1-201ENST00000257552 UBTFL1P0CB47 393 aaPredicted RBP17.5■□□□□ 0.39
MSI1-201ENST00000257552 CCDC30Q5VVM6 783 aa17.49■□□□□ 0.39
MSI1-201ENST00000257552 PI4K2BQ8TCG2 481 aa17.49■□□□□ 0.39
MSI1-201ENST00000257552 CACTINQ8WUQ7 758 aaKnown RBP17.49■□□□□ 0.39
MSI1-201ENST00000257552 DDX41Q9UJV9 622 aaKnown RBP17.49■□□□□ 0.39
MSI1-201ENST00000257552 GTF2E1P29083 439 aaPredicted RBP17.49■□□□□ 0.39
MSI1-201ENST00000257552 KRT85P78386 507 aa17.49■□□□□ 0.39
MSI1-201ENST00000257552 PTH1RQ03431 593 aa17.49■□□□□ 0.39
MSI1-201ENST00000257552 ME3Q16798 604 aa17.49■□□□□ 0.39
MSI1-201ENST00000257552 CDC37L1Q7L3B6 337 aa17.49■□□□□ 0.39
MSI1-201ENST00000257552 NPHP1O15259 732 aa17.49■□□□□ 0.39
MSI1-201ENST00000257552 ZNF75DP51815 510 aa17.49■□□□□ 0.39
MSI1-201ENST00000257552 TEFQ10587 303 aa17.49■□□□□ 0.39
MSI1-201ENST00000257552 PPP1R42Q7Z4L9 355 aa17.49■□□□□ 0.39
MSI1-201ENST00000257552 USP44Q9H0E7 712 aa17.49■□□□□ 0.39
MSI1-201ENST00000257552 CLIP2Q9UDT6 1046 aa17.49■□□□□ 0.39
MSI1-201ENST00000257552 NWD1Q149M9 1564 aa17.48■□□□□ 0.39
MSI1-201ENST00000257552 ATF3P18847 181 aa17.48■□□□□ 0.39
MSI1-201ENST00000257552 ST3GAL1Q11201 340 aa17.48■□□□□ 0.39
MSI1-201ENST00000257552 ARID5BQ14865 1188 aa17.48■□□□□ 0.39
MSI1-201ENST00000257552 ARHGEF25Q86VW2 580 aa17.48■□□□□ 0.39
MSI1-201ENST00000257552 CNTROBQ8N137 903 aa17.48■□□□□ 0.39
MSI1-201ENST00000257552 RHPN1Q8TCX5 695 aa17.48■□□□□ 0.39
MSI1-201ENST00000257552 TCEANC2Q96MN5 208 aa17.48■□□□□ 0.39
MSI1-201ENST00000257552 SLFN14P0C7P3 912 aa17.48■□□□□ 0.39
MSI1-201ENST00000257552 CCDC144BQ3MJ40 725 aa17.48■□□□□ 0.39
MSI1-201ENST00000257552 CCDC144CPQ8IYA2 1237 aa17.48■□□□□ 0.39
MSI1-201ENST00000257552 DNAJC25Q9H1X3 360 aa17.48■□□□□ 0.39
MSI1-201ENST00000257552 C19orf44Q9H6X5 657 aa17.48■□□□□ 0.39
MSI1-201ENST00000257552 SOS1Q07889 1333 aaPredicted RBP17.47■□□□□ 0.39
MSI1-201ENST00000257552 CHRNA2Q15822 529 aa17.47■□□□□ 0.39
MSI1-201ENST00000257552 CEP135Q66GS9 1140 aa17.47■□□□□ 0.39
MSI1-201ENST00000257552 KIF18AQ8NI77 898 aa17.47■□□□□ 0.39
MSI1-201ENST00000257552 CYP46A1Q9Y6A2 500 aa17.47■□□□□ 0.39
MSI1-201ENST00000257552 COL9A3Q14050 684 aaPredicted RBP17.46■□□□□ 0.39
MSI1-201ENST00000257552 ADAMTSL3P82987 1691 aa17.46■□□□□ 0.39
MSI1-201ENST00000257552 ERICH4A6NGS2 130 aa17.46■□□□□ 0.39
MSI1-201ENST00000257552 USP27XA6NNY8 438 aa17.46■□□□□ 0.39
MSI1-201ENST00000257552 BTBD11A6QL63 1104 aa17.46■□□□□ 0.39
MSI1-201ENST00000257552 SRGAP3O43295 1099 aa17.46■□□□□ 0.39
MSI1-201ENST00000257552 HTATSF1O43719 755 aaKnown RBP17.46■□□□□ 0.39
MSI1-201ENST00000257552 ZNF165P49910 485 aa17.46■□□□□ 0.39
MSI1-201ENST00000257552 PAXBP1Q9Y5B6 917 aa17.46■□□□□ 0.39
MSI1-201ENST00000257552 MARF1Q9Y4F3 1742 aaKnown RBP17.46■□□□□ 0.39
MSI1-201ENST00000257552 PRAMEF22A3QJZ6 481 aa17.46■□□□□ 0.38
MSI1-201ENST00000257552 GABPB1Q06547 395 aaPredicted RBP17.46■□□□□ 0.38
MSI1-201ENST00000257552 TMEM51Q9NW97 253 aa17.46■□□□□ 0.38
MSI1-201ENST00000257552 NLRP2Q9NX02 1062 aa17.46■□□□□ 0.38
MSI1-201ENST00000257552 ZNF215Q9UL58 517 aaPredicted RBP17.46■□□□□ 0.38
MSI1-201ENST00000257552 VGLL3A8MV65 326 aa17.45■□□□□ 0.38
MSI1-201ENST00000257552 KCNJ4P48050 445 aa17.45■□□□□ 0.38
MSI1-201ENST00000257552 TRMT1Q9NXH9 659 aaKnown RBP17.45■□□□□ 0.38
MSI1-201ENST00000257552 CHPF2Q9P2E5 772 aa17.45■□□□□ 0.38
MSI1-201ENST00000257552 TPCN1Q9ULQ1 816 aa17.45■□□□□ 0.38
MSI1-201ENST00000257552 C1orf141Q5JVX7 400 aa17.45■□□□□ 0.38
MSI1-201ENST00000257552 SPATA32Q96LK8 384 aa17.45■□□□□ 0.38
MSI1-201ENST00000257552 TMEM94Q12767 1356 aa17.45■□□□□ 0.38
MSI1-201ENST00000257552 OS9Q13438 667 aaPredicted RBP17.44■□□□□ 0.38
MSI1-201ENST00000257552 KMT5BQ4FZB7 885 aa17.44■□□□□ 0.38
MSI1-201ENST00000257552 BICD2Q8TD16 824 aa17.44■□□□□ 0.38
MSI1-201ENST00000257552 AOX1Q06278 1338 aa17.44■□□□□ 0.38
MSI1-201ENST00000257552 EPB41L2O43491 1005 aaKnown RBP17.44■□□□□ 0.38
MSI1-201ENST00000257552 MAPK8IP2Q13387 824 aaPredicted RBP17.44■□□□□ 0.38
MSI1-201ENST00000257552 VPS53Q5VIR6 699 aa17.44■□□□□ 0.38
MSI1-201ENST00000257552 PLA2G4DQ86XP0 818 aa17.44■□□□□ 0.38
MSI1-201ENST00000257552 ST7Q9NRC1 585 aa17.44■□□□□ 0.38
MSI1-201ENST00000257552 MORC2Q9Y6X9 1032 aaPredicted RBP17.44■□□□□ 0.38
MSI1-201ENST00000257552 NR1I2O75469 434 aa17.43■□□□□ 0.38
MSI1-201ENST00000257552 STK3Q13188 491 aa17.43■□□□□ 0.38
MSI1-201ENST00000257552 SSH3Q8TE77 659 aa17.43■□□□□ 0.38
MSI1-201ENST00000257552 ZSCAN31Q96LW9 406 aaPredicted RBP17.43■□□□□ 0.38
MSI1-201ENST00000257552 SYCP1Q15431 976 aa17.43■□□□□ 0.38
MSI1-201ENST00000257552 TERF2Q15554 542 aa17.43■□□□□ 0.38
MSI1-201ENST00000257552 PLEKHO1Q53GL0 409 aaPredicted RBP17.43■□□□□ 0.38
MSI1-201ENST00000257552 TAF3Q5VWG9 929 aa17.43■□□□□ 0.38
MSI1-201ENST00000257552 SH2B1Q9NRF2 756 aaPredicted RBP17.43■□□□□ 0.38
MSI1-201ENST00000257552 LTN1O94822 1766 aa17.43■□□□□ 0.38
MSI1-201ENST00000257552 CSB-PGBD3P0DP91 1061 aa17.43■□□□□ 0.38
MSI1-201ENST00000257552 KRT222Q8N1A0 295 aa17.43■□□□□ 0.38
MSI1-201ENST00000257552 RAB11FIP3O75154 756 aa17.42■□□□□ 0.38
MSI1-201ENST00000257552 EIF4A1P60842 406 aaKnown RBP17.42■□□□□ 0.38
MSI1-201ENST00000257552 FILIP1Q7Z7B0 1213 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms