RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 GIGYF2Q6Y7W6 1299 aaKnown RBP12.61□□□□□ -0.39
DCLK1-201ENST00000255448 ANKRD18AQ8IVF6 992 aa12.61□□□□□ -0.39
DCLK1-201ENST00000255448 RBM28Q9NW13 759 aaKnown RBP12.61□□□□□ -0.39
DCLK1-201ENST00000255448 RPRD2Q5VT52 1461 aaKnown RBP12.61□□□□□ -0.39
DCLK1-201ENST00000255448 KIF1BPQ96EK5 621 aa12.61□□□□□ -0.39
DCLK1-201ENST00000255448 SSBP05455 408 aaKnown RBP eCLIP12.61□□□□□ -0.39
DCLK1-201ENST00000255448 SMC5Q8IY18 1101 aa12.61□□□□□ -0.39
DCLK1-201ENST00000255448 NUP133Q8WUM0 1156 aa12.61□□□□□ -0.39
DCLK1-201ENST00000255448 GOPCQ9HD26 462 aa12.61□□□□□ -0.39
DCLK1-201ENST00000255448 NUP88Q99567 741 aaPredicted RBP12.61□□□□□ -0.39
DCLK1-201ENST00000255448 KDM5BQ9UGL1 1544 aa12.61□□□□□ -0.39
DCLK1-201ENST00000255448 ASXL2Q76L83 1435 aa12.61□□□□□ -0.39
DCLK1-201ENST00000255448 PRPF40BQ6NWY9 871 aaKnown RBP12.61□□□□□ -0.39
DCLK1-201ENST00000255448 CNKSR2Q8WXI2 1034 aa12.61□□□□□ -0.39
DCLK1-201ENST00000255448 TMX3Q96JJ7 454 aa12.61□□□□□ -0.39
DCLK1-201ENST00000255448 SH2B1Q9NRF2 756 aaPredicted RBP12.61□□□□□ -0.39
DCLK1-201ENST00000255448 GJB2P29033 226 aa12.6□□□□□ -0.39
DCLK1-201ENST00000255448 SOGA3Q5TF21 947 aa12.6□□□□□ -0.39
DCLK1-201ENST00000255448 MCM10Q7L590 875 aa12.6□□□□□ -0.39
DCLK1-201ENST00000255448 NEBLO76041 1014 aa12.6□□□□□ -0.39
DCLK1-201ENST00000255448 KRT28Q7Z3Y7 464 aa12.6□□□□□ -0.39
DCLK1-201ENST00000255448 ZEB2O60315 1214 aa12.6□□□□□ -0.39
DCLK1-201ENST00000255448 ATP2B2Q01814 1243 aa12.6□□□□□ -0.39
DCLK1-201ENST00000255448 ELF2Q15723 593 aa12.6□□□□□ -0.39
DCLK1-201ENST00000255448 EXOC6BQ9Y2D4 811 aa12.6□□□□□ -0.39
DCLK1-201ENST00000255448 DNAJC21Q5F1R6 531 aaKnown RBP12.6□□□□□ -0.39
DCLK1-201ENST00000255448 ISM2Q6H9L7 571 aa12.6□□□□□ -0.39
DCLK1-201ENST00000255448 NGLY1Q96IV0 654 aa12.6□□□□□ -0.39
DCLK1-201ENST00000255448 SYCP1Q15431 976 aa12.59□□□□□ -0.39
DCLK1-201ENST00000255448 UBAC1Q9BSL1 405 aa12.59□□□□□ -0.39
DCLK1-201ENST00000255448 UBE4AQ14139 1066 aa12.59□□□□□ -0.39
DCLK1-201ENST00000255448 CEP112Q8N8E3 955 aa12.59□□□□□ -0.39
DCLK1-201ENST00000255448 DNAJC25Q9H1X3 360 aa12.59□□□□□ -0.39
DCLK1-201ENST00000255448 LRP2BPQ9P2M1 347 aa12.59□□□□□ -0.39
DCLK1-201ENST00000255448 GPATCH8Q9UKJ3 1502 aaKnown RBP12.59□□□□□ -0.39
DCLK1-201ENST00000255448 NKTRP30414 1462 aaKnown RBP12.59□□□□□ -0.39
DCLK1-201ENST00000255448 PTCD1O75127 700 aaKnown RBP12.59□□□□□ -0.39
DCLK1-201ENST00000255448 GLRX3O76003 335 aaKnown RBP12.59□□□□□ -0.39
DCLK1-201ENST00000255448 MPHOSPH10O00566 681 aaKnown RBP12.59□□□□□ -0.39
DCLK1-201ENST00000255448 ZPR1O75312 459 aa12.59□□□□□ -0.39
DCLK1-201ENST00000255448 GUCY1B3Q02153 619 aa12.59□□□□□ -0.39
DCLK1-201ENST00000255448 CCDC178Q5BJE1 867 aa12.59□□□□□ -0.39
DCLK1-201ENST00000255448 JADE2Q9NQC1 790 aa12.59□□□□□ -0.39
DCLK1-201ENST00000255448 KRT18P05783 430 aaKnown RBP12.59□□□□□ -0.39
DCLK1-201ENST00000255448 ATP6V1AP38606 617 aa12.59□□□□□ -0.39
DCLK1-201ENST00000255448 ZSCAN26Q16670 478 aa12.59□□□□□ -0.39
DCLK1-201ENST00000255448 METTL24Q5JXM2 366 aa12.59□□□□□ -0.39
DCLK1-201ENST00000255448 LRCH2Q5VUJ6 765 aa12.59□□□□□ -0.39
DCLK1-201ENST00000255448 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.59□□□□□ -0.39
DCLK1-201ENST00000255448 TMOD2Q9NZR1 351 aa12.59□□□□□ -0.39
DCLK1-201ENST00000255448 EMILIN1Q9Y6C2 1016 aa12.59□□□□□ -0.39
DCLK1-201ENST00000255448 TUBB4AP04350 444 aa12.58□□□□□ -0.4
DCLK1-201ENST00000255448 RBM5P52756 815 aaKnown RBP eCLIP12.58□□□□□ -0.4
DCLK1-201ENST00000255448 EXOC5O00471 708 aa12.58□□□□□ -0.4
DCLK1-201ENST00000255448 ADAMTS2O95450 1211 aa12.58□□□□□ -0.4
DCLK1-201ENST00000255448 IFIT1P09914 478 aaKnown RBP12.58□□□□□ -0.4
DCLK1-201ENST00000255448 ZSCAN22P10073 491 aaPredicted RBP12.58□□□□□ -0.4
DCLK1-201ENST00000255448 ARID4AP29374 1257 aaPredicted RBP12.58□□□□□ -0.4
DCLK1-201ENST00000255448 SSH1Q8WYL5 1049 aa12.58□□□□□ -0.4
DCLK1-201ENST00000255448 CCDC6Q16204 474 aa12.58□□□□□ -0.4
DCLK1-201ENST00000255448 NUTM1Q86Y26 1132 aa12.58□□□□□ -0.4
DCLK1-201ENST00000255448 TEX13AQ9BXU3 409 aaPredicted RBP12.58□□□□□ -0.4
DCLK1-201ENST00000255448 ANKRD36BQ8N2N9 1353 aa12.57□□□□□ -0.4
DCLK1-201ENST00000255448 GCOM1H8Y6P7 765 aaPredicted RBP12.57□□□□□ -0.4
DCLK1-201ENST00000255448 OPA1O60313 960 aa12.57□□□□□ -0.4
DCLK1-201ENST00000255448 YEATS4O95619 227 aa12.57□□□□□ -0.4
DCLK1-201ENST00000255448 MYZAPP0CAP1 466 aa12.57□□□□□ -0.4
DCLK1-201ENST00000255448 INPP5BP32019 993 aa12.57□□□□□ -0.4
DCLK1-201ENST00000255448 EVCP57679 992 aa12.57□□□□□ -0.4
DCLK1-201ENST00000255448 BICDL1Q6ZP65 573 aa12.57□□□□□ -0.4
DCLK1-201ENST00000255448 FBF1Q8TES7 1133 aa12.57□□□□□ -0.4
DCLK1-201ENST00000255448 ZNF287Q9HBT7 754 aa12.57□□□□□ -0.4
DCLK1-201ENST00000255448 DBF4Q9UBU7 674 aaPredicted RBP12.57□□□□□ -0.4
DCLK1-201ENST00000255448 CEP83Q9Y592 693 aa12.57□□□□□ -0.4
DCLK1-201ENST00000255448 MSH6P52701 1360 aa12.57□□□□□ -0.4
DCLK1-201ENST00000255448 TMCO5BA8MYB1 307 aa12.57□□□□□ -0.4
DCLK1-201ENST00000255448 USO1O60763 962 aaKnown RBP12.57□□□□□ -0.4
DCLK1-201ENST00000255448 KIF5BP33176 963 aa12.57□□□□□ -0.4
DCLK1-201ENST00000255448 WWC2Q6AWC2 1192 aa12.57□□□□□ -0.4
DCLK1-201ENST00000255448 THUMPD2Q9BTF0 503 aaKnown RBP12.57□□□□□ -0.4
DCLK1-201ENST00000255448 UHRF1BP1LA0JNW5 1464 aa12.57□□□□□ -0.4
DCLK1-201ENST00000255448 GOLIM4O00461 696 aa12.57□□□□□ -0.4
DCLK1-201ENST00000255448 HDXQ7Z353 690 aa12.57□□□□□ -0.4
DCLK1-201ENST00000255448 NAA15Q9BXJ9 866 aaKnown RBP12.57□□□□□ -0.4
DCLK1-201ENST00000255448 PUF60Q9UHX1 559 aaKnown RBP12.57□□□□□ -0.4
DCLK1-201ENST00000255448 ZNF518AQ6AHZ1 1483 aa12.57□□□□□ -0.4
DCLK1-201ENST00000255448 RHOXF2BP0C7M4 288 aa12.57□□□□□ -0.4
DCLK1-201ENST00000255448 WASF1Q92558 559 aa12.57□□□□□ -0.4
DCLK1-201ENST00000255448 AIDAQ96BJ3 306 aa12.57□□□□□ -0.4
DCLK1-201ENST00000255448 RHOXF2Q9BQY4 288 aa12.57□□□□□ -0.4
DCLK1-201ENST00000255448 RAPGEF6Q8TEU7 1601 aa12.57□□□□□ -0.4
DCLK1-201ENST00000255448 UBASH3AP57075 661 aa12.57□□□□□ -0.4
DCLK1-201ENST00000255448 ATP10BO94823 1461 aa12.56□□□□□ -0.4
DCLK1-201ENST00000255448 ZNF500O60304 480 aaPredicted RBP12.56□□□□□ -0.4
DCLK1-201ENST00000255448 IDH1O75874 414 aaKnown RBP12.56□□□□□ -0.4
DCLK1-201ENST00000255448 SYT1P21579 422 aa12.56□□□□□ -0.4
DCLK1-201ENST00000255448 DACT1Q9NYF0 836 aa12.56□□□□□ -0.4
DCLK1-201ENST00000255448 KIF4AO95239 1232 aa12.56□□□□□ -0.4
DCLK1-201ENST00000255448 TYRO3Q06418 890 aa12.56□□□□□ -0.4
DCLK1-201ENST00000255448 CAVIN4Q5BKX8 364 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms