RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 DNM1Q05193 864 aaKnown RBP22.41■■□□□ 1.18
PPFIA1-201ENST00000253925 SBNO1A3KN83 1393 aa22.41■■□□□ 1.18
PPFIA1-201ENST00000253925 HSP90AB3PQ58FF7 597 aa22.41■■□□□ 1.18
PPFIA1-201ENST00000253925 FAM177A1Q8N128 213 aaPredicted RBP22.41■■□□□ 1.18
PPFIA1-201ENST00000253925 ZNHIT6Q9NWK9 470 aaKnown RBP22.41■■□□□ 1.18
PPFIA1-201ENST00000253925 AOX1Q06278 1338 aa22.41■■□□□ 1.18
PPFIA1-201ENST00000253925 HOXC9P31274 260 aa22.41■■□□□ 1.18
PPFIA1-201ENST00000253925 COPS6Q7L5N1 327 aa22.41■■□□□ 1.18
PPFIA1-201ENST00000253925 GSDMDP57764 484 aa22.4■■□□□ 1.18
PPFIA1-201ENST00000253925 CCAR1Q8IX12 1150 aaKnown RBP22.4■■□□□ 1.18
PPFIA1-201ENST00000253925 ZBTB3Q9H5J0 574 aa22.4■■□□□ 1.18
PPFIA1-201ENST00000253925 PA2G4Q9UQ80 394 aaKnown RBP22.4■■□□□ 1.18
PPFIA1-201ENST00000253925 TCEANC2Q96MN5 208 aa22.4■■□□□ 1.18
PPFIA1-201ENST00000253925 RAI14Q9P0K7 980 aa22.4■■□□□ 1.18
PPFIA1-201ENST00000253925 CFAP65Q6ZU64 1925 aaKnown RBP22.4■■□□□ 1.18
PPFIA1-201ENST00000253925 DDX46Q7L014 1031 aaKnown RBP22.39■■□□□ 1.18
PPFIA1-201ENST00000253925 UBXN4Q92575 508 aa22.39■■□□□ 1.18
PPFIA1-201ENST00000253925 PHAXQ9H814 394 aaKnown RBP22.39■■□□□ 1.18
PPFIA1-201ENST00000253925 ADCY10Q96PN6 1610 aa22.39■■□□□ 1.18
PPFIA1-201ENST00000253925 NMIQ13287 307 aaPredicted RBP22.39■■□□□ 1.17
PPFIA1-201ENST00000253925 USP16Q9Y5T5 823 aa22.39■■□□□ 1.17
PPFIA1-201ENST00000253925 C16orf45Q96MC5 204 aaPredicted RBP22.39■■□□□ 1.17
PPFIA1-201ENST00000253925 CGNQ9P2M7 1197 aaKnown RBP22.39■■□□□ 1.17
PPFIA1-201ENST00000253925 MAP3K12Q12852 859 aa22.38■■□□□ 1.17
PPFIA1-201ENST00000253925 RAD50Q92878 1312 aa22.38■■□□□ 1.17
PPFIA1-201ENST00000253925 OFD1O75665 1012 aa22.38■■□□□ 1.17
PPFIA1-201ENST00000253925 MCMDC2Q4G0Z9 681 aa22.38■■□□□ 1.17
PPFIA1-201ENST00000253925 CDK5RAP3Q96JB5 506 aa22.38■■□□□ 1.17
PPFIA1-201ENST00000253925 ORC3Q9UBD5 711 aaPredicted RBP22.38■■□□□ 1.17
PPFIA1-201ENST00000253925 NOLC1Q14978 699 aaKnown RBP eCLIP22.38■■□□□ 1.17
PPFIA1-201ENST00000253925 HOXB7P09629 217 aa22.37■■□□□ 1.17
PPFIA1-201ENST00000253925 ZNF445P59923 1031 aa22.37■■□□□ 1.17
PPFIA1-201ENST00000253925 ZSCAN12O43309 604 aa22.37■■□□□ 1.17
PPFIA1-201ENST00000253925 TBX22Q9Y458 520 aa22.37■■□□□ 1.17
PPFIA1-201ENST00000253925 LEKR1Q6ZMV7 388 aa22.37■■□□□ 1.17
PPFIA1-201ENST00000253925 RRAGDQ9NQL2 400 aaPredicted RBP22.37■■□□□ 1.17
PPFIA1-201ENST00000253925 DACT1Q9NYF0 836 aa22.37■■□□□ 1.17
PPFIA1-201ENST00000253925 CDC42BPAQ5VT25 1732 aa22.37■■□□□ 1.17
PPFIA1-201ENST00000253925 TRPM1Q7Z4N2 1603 aa22.37■■□□□ 1.17
PPFIA1-201ENST00000253925 CREB3L3Q68CJ9 461 aa22.36■■□□□ 1.17
PPFIA1-201ENST00000253925 ANKRD18BA2A2Z9 1011 aa22.36■■□□□ 1.17
PPFIA1-201ENST00000253925 SYT1P21579 422 aa22.36■■□□□ 1.17
PPFIA1-201ENST00000253925 EPS15P42566 896 aa22.36■■□□□ 1.17
PPFIA1-201ENST00000253925 NPHP3Q7Z494 1330 aa22.36■■□□□ 1.17
PPFIA1-201ENST00000253925 ABCF2Q9UG63 623 aa22.35■■□□□ 1.17
PPFIA1-201ENST00000253925 SLC12A7Q9Y666 1083 aa22.35■■□□□ 1.17
PPFIA1-201ENST00000253925 NCOA7Q8NI08 942 aa22.35■■□□□ 1.17
PPFIA1-201ENST00000253925 JARID2Q92833 1246 aaPredicted RBP22.35■■□□□ 1.17
PPFIA1-201ENST00000253925 ERLIN1O75477 346 aa22.35■■□□□ 1.17
PPFIA1-201ENST00000253925 IP6K1Q92551 441 aa22.35■■□□□ 1.17
PPFIA1-201ENST00000253925 SNRKQ9NRH2 765 aa22.35■■□□□ 1.17
PPFIA1-201ENST00000253925 NEO1Q92859 1461 aa22.35■■□□□ 1.17
PPFIA1-201ENST00000253925 ZFYP08048 801 aaPredicted RBP22.35■■□□□ 1.17
PPFIA1-201ENST00000253925 TTF1Q15361 905 aaPredicted RBP22.35■■□□□ 1.17
PPFIA1-201ENST00000253925 CWF19L2Q2TBE0 894 aaKnown RBP22.35■■□□□ 1.17
PPFIA1-201ENST00000253925 TEX13AQ9BXU3 409 aaPredicted RBP22.35■■□□□ 1.17
PPFIA1-201ENST00000253925 IQGAP3Q86VI3 1631 aa22.35■■□□□ 1.17
PPFIA1-201ENST00000253925 TOP1P11387 765 aaKnown RBP22.34■■□□□ 1.17
PPFIA1-201ENST00000253925 H0YHG0 523 aa22.34■■□□□ 1.17
PPFIA1-201ENST00000253925 RUFY3Q7L099 469 aa22.34■■□□□ 1.17
PPFIA1-201ENST00000253925 EPB41L2O43491 1005 aaKnown RBP22.34■■□□□ 1.17
PPFIA1-201ENST00000253925 SLC39A6Q13433 755 aa22.34■■□□□ 1.17
PPFIA1-201ENST00000253925 UGGT1Q9NYU2 1555 aa22.34■■□□□ 1.17
PPFIA1-201ENST00000253925 GOLGA8AA7E2F4 631 aa22.34■■□□□ 1.17
PPFIA1-201ENST00000253925 GSPT1P15170 499 aaKnown RBP22.34■■□□□ 1.17
PPFIA1-201ENST00000253925 ANO6Q4KMQ2 910 aa22.34■■□□□ 1.17
PPFIA1-201ENST00000253925 TRMT112Q9UI30 125 aaKnown RBP22.34■■□□□ 1.17
PPFIA1-201ENST00000253925 LDHAL6AQ6ZMR3 332 aa22.34■■□□□ 1.17
PPFIA1-201ENST00000253925 ZNF830Q96NB3 372 aaPredicted RBP22.34■■□□□ 1.17
PPFIA1-201ENST00000253925 RBSNQ9H1K0 784 aa22.34■■□□□ 1.17
PPFIA1-201ENST00000253925 CCDC171Q6TFL3 1326 aa22.33■■□□□ 1.17
PPFIA1-201ENST00000253925 LRRC59Q96AG4 307 aaKnown RBP22.33■■□□□ 1.17
PPFIA1-201ENST00000253925 LMBR1LQ6UX01 489 aa22.33■■□□□ 1.17
PPFIA1-201ENST00000253925 Q6ZUG5 572 aa22.33■■□□□ 1.17
PPFIA1-201ENST00000253925 SIRT1Q96EB6 747 aa22.33■■□□□ 1.17
PPFIA1-201ENST00000253925 IFIT3O14879 490 aaKnown RBP22.33■■□□□ 1.16
PPFIA1-201ENST00000253925 CNNM3Q8NE01 707 aa22.33■■□□□ 1.16
PPFIA1-201ENST00000253925 RNF41Q9H4P4 317 aaPredicted RBP22.33■■□□□ 1.16
PPFIA1-201ENST00000253925 IL15P40933 162 aaPredicted RBP22.33■■□□□ 1.16
PPFIA1-201ENST00000253925 HAND2P61296 217 aa22.32■■□□□ 1.16
PPFIA1-201ENST00000253925 PLEKHG3A1L390 1219 aa22.32■■□□□ 1.16
PPFIA1-201ENST00000253925 SGSM2O43147 1006 aa22.32■■□□□ 1.16
PPFIA1-201ENST00000253925 SLC5A1P13866 664 aa22.32■■□□□ 1.16
PPFIA1-201ENST00000253925 IARSP41252 1262 aaKnown RBP22.32■■□□□ 1.16
PPFIA1-201ENST00000253925 CLASP1Q7Z460 1538 aa22.32■■□□□ 1.16
PPFIA1-201ENST00000253925 PNMA6EA0A0J9YXQ4 647 aa22.32■■□□□ 1.16
PPFIA1-201ENST00000253925 SSRP1Q08945 709 aaKnown RBP22.32■■□□□ 1.16
PPFIA1-201ENST00000253925 PDE4CQ08493 712 aa22.32■■□□□ 1.16
PPFIA1-201ENST00000253925 POLR3DP05423 398 aaPredicted RBP22.31■■□□□ 1.16
PPFIA1-201ENST00000253925 LMBRD1Q9NUN5 540 aa22.31■■□□□ 1.16
PPFIA1-201ENST00000253925 LRRC2Q9BYS8 371 aa22.31■■□□□ 1.16
PPFIA1-201ENST00000253925 TRMT1Q9NXH9 659 aaKnown RBP22.31■■□□□ 1.16
PPFIA1-201ENST00000253925 RTL1A6NKG5 1358 aa22.31■■□□□ 1.16
PPFIA1-201ENST00000253925 TTC12Q9H892 705 aaPredicted RBP22.31■■□□□ 1.16
PPFIA1-201ENST00000253925 DDX21Q9NR30 783 aaKnown RBP eCLIP22.31■■□□□ 1.16
PPFIA1-201ENST00000253925 TCEAL9Q9UHQ7 104 aa22.31■■□□□ 1.16
PPFIA1-201ENST00000253925 ARHGAP29Q52LW3 1261 aa22.31■■□□□ 1.16
PPFIA1-201ENST00000253925 SOGA3Q5TF21 947 aa22.31■■□□□ 1.16
PPFIA1-201ENST00000253925 TYRO3Q06418 890 aa22.3■■□□□ 1.16
PPFIA1-201ENST00000253925 PAXBP1Q9Y5B6 917 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms