RNA–Protein interactions for RNA: ENST00000253693.6

CAPN7-201, Transcript of calpain 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN7, Length 4,353 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7-201ENST00000253693 POLA2Q14181 598 aa18.17■□□□□ 0.5
CAPN7-201ENST00000253693 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.17■□□□□ 0.52e-7■■□□□ 13.4
CAPN7-201ENST00000253693 FERMT3Q86UX7 667 aa18.17■□□□□ 0.5
CAPN7-201ENST00000253693 KIF2CQ99661 725 aa18.17■□□□□ 0.5
CAPN7-201ENST00000253693 SNX14Q9Y5W7 946 aa18.17■□□□□ 0.5
CAPN7-201ENST00000253693 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.17■□□□□ 0.5
CAPN7-201ENST00000253693 NRKQ7Z2Y5 1582 aa18.17■□□□□ 0.5
CAPN7-201ENST00000253693 FAM177BA6PVY3 158 aa18.16■□□□□ 0.5
CAPN7-201ENST00000253693 NEURL1BA8MQ27 555 aa18.16■□□□□ 0.5
CAPN7-201ENST00000253693 GOLIM4O00461 696 aa18.16■□□□□ 0.5
CAPN7-201ENST00000253693 PLBD2Q8NHP8 589 aa18.16■□□□□ 0.5
CAPN7-201ENST00000253693 ZSCAN22P10073 491 aaPredicted RBP18.16■□□□□ 0.5
CAPN7-201ENST00000253693 IFIT5Q13325 482 aaKnown RBP18.16■□□□□ 0.5
CAPN7-201ENST00000253693 CTNNA3Q9UI47 895 aa18.16■□□□□ 0.5
CAPN7-201ENST00000253693 NRDCO43847 1150 aa18.16■□□□□ 0.5
CAPN7-201ENST00000253693 DDX46Q7L014 1031 aaKnown RBP18.16■□□□□ 0.5
CAPN7-201ENST00000253693 USP16Q9Y5T5 823 aa18.16■□□□□ 0.5
CAPN7-201ENST00000253693 CCDC171Q6TFL3 1326 aa18.16■□□□□ 0.5
CAPN7-201ENST00000253693 TFCP2Q12800 502 aa18.16■□□□□ 0.5
CAPN7-201ENST00000253693 SYNE3Q6ZMZ3 975 aa18.15■□□□□ 0.5
CAPN7-201ENST00000253693 SASS6Q6UVJ0 657 aa18.15■□□□□ 0.5
CAPN7-201ENST00000253693 FER1L4A9Z1Z3 1794 aa18.15■□□□□ 0.5
CAPN7-201ENST00000253693 VPS53Q5VIR6 699 aa18.15■□□□□ 0.5
CAPN7-201ENST00000253693 CREB3L3Q68CJ9 461 aa18.15■□□□□ 0.5
CAPN7-201ENST00000253693 GOLGA6L19H0YKK7 550 aa18.14■□□□□ 0.5
CAPN7-201ENST00000253693 NCAPD2Q15021 1401 aa18.14■□□□□ 0.49
CAPN7-201ENST00000253693 IL15P40933 162 aaPredicted RBP18.14■□□□□ 0.49
CAPN7-201ENST00000253693 METTL24Q5JXM2 366 aa18.14■□□□□ 0.49
CAPN7-201ENST00000253693 CCDC73Q6ZRK6 1079 aa18.14■□□□□ 0.49
CAPN7-201ENST00000253693 MON2Q7Z3U7 1717 aa18.14■□□□□ 0.49
CAPN7-201ENST00000253693 KNDC1Q76NI1 1749 aa18.14■□□□□ 0.49
CAPN7-201ENST00000253693 HMGB1P09429 215 aaKnown RBP18.14■□□□□ 0.49
CAPN7-201ENST00000253693 DHX16O60231 1041 aaKnown RBP18.14■□□□□ 0.49
CAPN7-201ENST00000253693 NECAB1Q8N987 351 aa18.14■□□□□ 0.49
CAPN7-201ENST00000253693 NEK1Q96PY6 1258 aa18.14■□□□□ 0.49
CAPN7-201ENST00000253693 CCDC183Q5T5S1 534 aa18.13■□□□□ 0.49
CAPN7-201ENST00000253693 SPATA32Q96LK8 384 aa18.13■□□□□ 0.49
CAPN7-201ENST00000253693 CPA1P15085 419 aa18.13■□□□□ 0.49
CAPN7-201ENST00000253693 HSP90AB3PQ58FF7 597 aa18.13■□□□□ 0.49
CAPN7-201ENST00000253693 ZSCAN25Q6NSZ9 544 aa18.13■□□□□ 0.49
CAPN7-201ENST00000253693 BECN2A8MW95 431 aa18.13■□□□□ 0.49
CAPN7-201ENST00000253693 NFXL1Q6ZNB6 911 aa18.13■□□□□ 0.49
CAPN7-201ENST00000253693 EAF2Q96CJ1 260 aaPredicted RBP18.13■□□□□ 0.49
CAPN7-201ENST00000253693 TCEANC2Q96MN5 208 aa18.13■□□□□ 0.49
CAPN7-201ENST00000253693 C3P01024 1663 aa18.13■□□□□ 0.49
CAPN7-201ENST00000253693 DDX11Q96FC9 970 aa18.12■□□□□ 0.49
CAPN7-201ENST00000253693 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.12■□□□□ 0.49
CAPN7-201ENST00000253693 RUFY3Q7L099 469 aa18.12■□□□□ 0.49
CAPN7-201ENST00000253693 CCDC192P0DO97 292 aa18.12■□□□□ 0.49
CAPN7-201ENST00000253693 PKP1Q13835 747 aa18.12■□□□□ 0.49
CAPN7-201ENST00000253693 MCMDC2Q4G0Z9 681 aa18.12■□□□□ 0.49
CAPN7-201ENST00000253693 KIF13AQ9H1H9 1805 aa18.12■□□□□ 0.49
CAPN7-201ENST00000253693 TRIM29Q14134 588 aa18.12■□□□□ 0.49
CAPN7-201ENST00000253693 TNNI3KQ59H18 835 aa18.12■□□□□ 0.49
CAPN7-201ENST00000253693 LRSAM1Q6UWE0 723 aa18.12■□□□□ 0.49
CAPN7-201ENST00000253693 USP48Q86UV5 1035 aa18.12■□□□□ 0.49
CAPN7-201ENST00000253693 FAM227BQ96M60 508 aa18.12■□□□□ 0.49
CAPN7-201ENST00000253693 FPGT-TNNI3KV9GXZ4 949 aa18.12■□□□□ 0.49
CAPN7-201ENST00000253693 LMBRD1Q9NUN5 540 aa18.11■□□□□ 0.49
CAPN7-201ENST00000253693 GPTP24298 496 aa18.11■□□□□ 0.49
CAPN7-201ENST00000253693 EXOC5O00471 708 aa18.11■□□□□ 0.49
CAPN7-201ENST00000253693 UBE2HP62256 183 aa18.11■□□□□ 0.49
CAPN7-201ENST00000253693 TPM4P67936 248 aa18.11■□□□□ 0.49
CAPN7-201ENST00000253693 CEBPZQ03701 1054 aaKnown RBP18.11■□□□□ 0.49
CAPN7-201ENST00000253693 IMMTQ16891 758 aaKnown RBP18.11■□□□□ 0.49
CAPN7-201ENST00000253693 ZSCAN30Q86W11 494 aa18.11■□□□□ 0.49
CAPN7-201ENST00000253693 SCAND2PQ9GZW5 306 aaPredicted RBP18.11■□□□□ 0.49
CAPN7-201ENST00000253693 MPHOSPH8Q99549 860 aa18.1■□□□□ 0.49
CAPN7-201ENST00000253693 VPS37DQ86XT2 251 aa18.1■□□□□ 0.49
CAPN7-201ENST00000253693 ZNF396Q96N95 335 aaPredicted RBP18.1■□□□□ 0.49
CAPN7-201ENST00000253693 CFAP45Q9UL16 551 aa18.1■□□□□ 0.49
CAPN7-201ENST00000253693 TRMT112Q9UI30 125 aaKnown RBP18.1■□□□□ 0.49
CAPN7-201ENST00000253693 F13A1P00488 732 aa18.09■□□□□ 0.49
CAPN7-201ENST00000253693 PI4K2BQ8TCG2 481 aa18.09■□□□□ 0.49
CAPN7-201ENST00000253693 CEMIPQ8WUJ3 1361 aa18.09■□□□□ 0.49
CAPN7-201ENST00000253693 BRD1O95696 1058 aa18.09■□□□□ 0.49
CAPN7-201ENST00000253693 CNPY2Q9Y2B0 182 aa18.09■□□□□ 0.49
CAPN7-201ENST00000253693 A1BGP04217 495 aa18.09■□□□□ 0.49
CAPN7-201ENST00000253693 SYT1P21579 422 aa18.09■□□□□ 0.49
CAPN7-201ENST00000253693 TNMDQ9H2S6 317 aa18.09■□□□□ 0.49
CAPN7-201ENST00000253693 SNRKQ9NRH2 765 aa18.09■□□□□ 0.49
CAPN7-201ENST00000253693 RGS12O14924 1447 aa18.09■□□□□ 0.49
CAPN7-201ENST00000253693 PRIM1P49642 420 aaKnown RBP18.09■□□□□ 0.49
CAPN7-201ENST00000253693 LDHAL6AQ6ZMR3 332 aa18.09■□□□□ 0.49
CAPN7-201ENST00000253693 MTX1Q13505 466 aa18.08■□□□□ 0.49
CAPN7-201ENST00000253693 DBNDD2Q9BQY9 259 aa18.08■□□□□ 0.49
CAPN7-201ENST00000253693 ANKRD18BA2A2Z9 1011 aa18.08■□□□□ 0.48
CAPN7-201ENST00000253693 NUP62CLQ9H1M0 184 aa18.08■□□□□ 0.48
CAPN7-201ENST00000253693 PAG1Q9NWQ8 432 aa18.08■□□□□ 0.48
CAPN7-201ENST00000253693 IDH1O75874 414 aaKnown RBP18.08■□□□□ 0.48
CAPN7-201ENST00000253693 LSG1Q9H089 658 aaKnown RBP18.08■□□□□ 0.48
CAPN7-201ENST00000253693 SLAIN2Q9P270 581 aa18.08■□□□□ 0.48
CAPN7-201ENST00000253693 RIMS1Q86UR5 1692 aaKnown RBP18.08■□□□□ 0.48
CAPN7-201ENST00000253693 ERVV-2B6SEH9 535 aa18.07■□□□□ 0.48
CAPN7-201ENST00000253693 CCDC191Q8NCU4 936 aa18.07■□□□□ 0.48
CAPN7-201ENST00000253693 FSD2A1L4K1 749 aa18.07■□□□□ 0.48
CAPN7-201ENST00000253693 SLC27A2O14975 620 aa18.07■□□□□ 0.48
CAPN7-201ENST00000253693 TM6SF1Q9BZW5 370 aa18.07■□□□□ 0.48
CAPN7-201ENST00000253693 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.07■□□□□ 0.48
CAPN7-201ENST00000253693 ERICH2A1L162 156 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms