RNA–Protein interactions for RNA: ENST00000250003.3

MYOD1-201, Transcript of myogenic differentiation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MYOD1, Length 1,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYOD1-201ENST00000250003 AAMPQ13685 434 aa20.79■□□□□ 0.92
MYOD1-201ENST00000250003 GIGYF2Q6Y7W6 1299 aaKnown RBP20.79■□□□□ 0.92
MYOD1-201ENST00000250003 USP44Q9H0E7 712 aa20.79■□□□□ 0.92
MYOD1-201ENST00000250003 ERVV-1B6SEH8 477 aa20.78■□□□□ 0.92
MYOD1-201ENST00000250003 CCDC136Q96JN2 1154 aa20.78■□□□□ 0.92
MYOD1-201ENST00000250003 PCDHB15Q9Y5E8 787 aa20.78■□□□□ 0.92
MYOD1-201ENST00000250003 RFC4P35249 363 aa20.78■□□□□ 0.92
MYOD1-201ENST00000250003 TCIRG1Q13488 830 aa20.77■□□□□ 0.92
MYOD1-201ENST00000250003 NBPF7P0C2Y1 421 aaPredicted RBP20.76■□□□□ 0.91
MYOD1-201ENST00000250003 GCKRQ14397 625 aa20.76■□□□□ 0.91
MYOD1-201ENST00000250003 C9orf78Q9NZ63 289 aaPredicted RBP20.76■□□□□ 0.91
MYOD1-201ENST00000250003 GOLGB1Q14789 3259 aaKnown RBP20.76■□□□□ 0.91
MYOD1-201ENST00000250003 GNAI3P08754 354 aa20.76■□□□□ 0.91
MYOD1-201ENST00000250003 UBTFL1P0CB47 393 aaPredicted RBP20.76■□□□□ 0.91
MYOD1-201ENST00000250003 GPTP24298 496 aa20.76■□□□□ 0.91
MYOD1-201ENST00000250003 ISCA1Q9BUE6 129 aa20.76■□□□□ 0.91
MYOD1-201ENST00000250003 SRP68Q9UHB9 627 aaKnown RBP20.76■□□□□ 0.91
MYOD1-201ENST00000250003 IBTKQ9P2D0 1353 aaPredicted RBP20.75■□□□□ 0.91
MYOD1-201ENST00000250003 GRM8O00222 908 aa20.75■□□□□ 0.91
MYOD1-201ENST00000250003 HSP90AB3PQ58FF7 597 aa20.75■□□□□ 0.91
MYOD1-201ENST00000250003 NLGN1Q8N2Q7 840 aa20.75■□□□□ 0.91
MYOD1-201ENST00000250003 NLGN2Q8NFZ4 835 aa20.75■□□□□ 0.91
MYOD1-201ENST00000250003 CWC25Q9NXE8 425 aaPredicted RBP20.75■□□□□ 0.91
MYOD1-201ENST00000250003 GYS1P13807 737 aa20.74■□□□□ 0.91
MYOD1-201ENST00000250003 USPL1Q5W0Q7 1092 aa20.74■□□□□ 0.91
MYOD1-201ENST00000250003 CCDC191Q8NCU4 936 aa20.74■□□□□ 0.91
MYOD1-201ENST00000250003 NARFQ9UHQ1 456 aa20.74■□□□□ 0.91
MYOD1-201ENST00000250003 ZPR1O75312 459 aa20.73■□□□□ 0.91
MYOD1-201ENST00000250003 GNAI2P04899 355 aa20.73■□□□□ 0.91
MYOD1-201ENST00000250003 ZNF652Q9Y2D9 606 aa20.73■□□□□ 0.91
MYOD1-201ENST00000250003 CD2APQ9Y5K6 639 aa20.73■□□□□ 0.91
MYOD1-201ENST00000250003 LRRFIP2Q9Y608 721 aaKnown RBP20.73■□□□□ 0.91
MYOD1-201ENST00000250003 UBN2Q6ZU65 1347 aa20.73■□□□□ 0.91
MYOD1-201ENST00000250003 USP42Q9H9J4 1324 aaKnown RBP20.73■□□□□ 0.91
MYOD1-201ENST00000250003 MMP10P09238 476 aa20.72■□□□□ 0.91
MYOD1-201ENST00000250003 JARID2Q92833 1246 aaPredicted RBP20.72■□□□□ 0.91
MYOD1-201ENST00000250003 BCL2L12Q9HB09 334 aa20.72■□□□□ 0.91
MYOD1-201ENST00000250003 UTYO14607 1347 aa20.72■□□□□ 0.91
MYOD1-201ENST00000250003 UBE3BQ7Z3V4 1068 aa20.71■□□□□ 0.91
MYOD1-201ENST00000250003 NLRP10Q86W26 655 aa20.71■□□□□ 0.91
MYOD1-201ENST00000250003 TRIM28Q13263 835 aaKnown RBP20.71■□□□□ 0.91
MYOD1-201ENST00000250003 ZNF34Q8IZ26 560 aa20.71■□□□□ 0.91
MYOD1-201ENST00000250003 RTL5Q5HYW3 569 aaPredicted RBP20.7■□□□□ 0.9
MYOD1-201ENST00000250003 CLEC4GQ6UXB4 293 aa20.7■□□□□ 0.9
MYOD1-201ENST00000250003 NIP7Q9Y221 180 aaKnown RBP eCLIP20.7■□□□□ 0.9
MYOD1-201ENST00000250003 GPR162Q16538 588 aa20.69■□□□□ 0.9
MYOD1-201ENST00000250003 CEP85Q6P2H3 762 aa20.69■□□□□ 0.9
MYOD1-201ENST00000250003 IGHDP01880 384 aa20.69■□□□□ 0.9
MYOD1-201ENST00000250003 SIRT2Q8IXJ6 389 aa20.69■□□□□ 0.9
MYOD1-201ENST00000250003 SUCLG2Q96I99 432 aa20.69■□□□□ 0.9
MYOD1-201ENST00000250003 CASP7P55210 303 aa20.68■□□□□ 0.9
MYOD1-201ENST00000250003 RGL2O15211 777 aa20.67■□□□□ 0.9
MYOD1-201ENST00000250003 TBC1D9BQ66K14 1250 aa20.67■□□□□ 0.9
MYOD1-201ENST00000250003 H7C1W4 665 aa20.67■□□□□ 0.9
MYOD1-201ENST00000250003 BICDL1Q6ZP65 573 aa20.67■□□□□ 0.9
MYOD1-201ENST00000250003 ANKRD44Q8N8A2 993 aa20.67■□□□□ 0.9
MYOD1-201ENST00000250003 KDM2BQ8NHM5 1336 aa20.67■□□□□ 0.9
MYOD1-201ENST00000250003 FAM89AQ96GI7 184 aa20.67■□□□□ 0.9
MYOD1-201ENST00000250003 KAZALD1Q96I82 304 aa20.67■□□□□ 0.9
MYOD1-201ENST00000250003 FAM177BA6PVY3 158 aa20.66■□□□□ 0.9
MYOD1-201ENST00000250003 HDAC1Q13547 482 aaPredicted RBP20.66■□□□□ 0.9
MYOD1-201ENST00000250003 SUSD4Q5VX71 490 aa20.66■□□□□ 0.9
MYOD1-201ENST00000250003 PCCAP05165 728 aaPredicted RBP20.65■□□□□ 0.9
MYOD1-201ENST00000250003 PARP10Q53GL7 1025 aa20.65■□□□□ 0.9
MYOD1-201ENST00000250003 RPAP2Q8IXW5 612 aaPredicted RBP20.65■□□□□ 0.9
MYOD1-201ENST00000250003 ZBTB38Q8NAP3 1195 aaPredicted RBP20.65■□□□□ 0.9
MYOD1-201ENST00000250003 RWDD1Q9H446 243 aaPredicted RBP20.65■□□□□ 0.9
MYOD1-201ENST00000250003 BICC1Q9H694 974 aaKnown RBP20.65■□□□□ 0.9
MYOD1-201ENST00000250003 TRMT112Q9UI30 125 aaKnown RBP20.65■□□□□ 0.9
MYOD1-201ENST00000250003 PARP3Q9Y6F1 533 aa20.65■□□□□ 0.9
MYOD1-201ENST00000250003 YY1P25490 414 aa20.64■□□□□ 0.9
MYOD1-201ENST00000250003 HDAC5Q9UQL6 1122 aa20.64■□□□□ 0.9
MYOD1-201ENST00000250003 PNMA6EA0A0J9YXQ4 647 aa20.64■□□□□ 0.89
MYOD1-201ENST00000250003 EPHA10Q5JZY3 1008 aa20.64■□□□□ 0.89
MYOD1-201ENST00000250003 SYNE4Q8N205 404 aa20.64■□□□□ 0.89
MYOD1-201ENST00000250003 CENPQQ7L2Z9 268 aaPredicted RBP20.63■□□□□ 0.89
MYOD1-201ENST00000250003 MYH3P11055 1940 aa20.63■□□□□ 0.89
MYOD1-201ENST00000250003 LAMB2P55268 1798 aa20.63■□□□□ 0.89
MYOD1-201ENST00000250003 DDX60Q8IY21 1712 aaKnown RBP20.62■□□□□ 0.89
MYOD1-201ENST00000250003 NTSR2O95665 410 aa20.62■□□□□ 0.89
MYOD1-201ENST00000250003 TM4SF1P30408 202 aa20.62■□□□□ 0.89
MYOD1-201ENST00000250003 SETDB2Q96T68 719 aa20.62■□□□□ 0.89
MYOD1-201ENST00000250003 UTP14AQ9BVJ6 771 aaKnown RBP20.62■□□□□ 0.89
MYOD1-201ENST00000250003 PPP1R42Q7Z4L9 355 aa20.62■□□□□ 0.89
MYOD1-201ENST00000250003 SRGAP3O43295 1099 aa20.61■□□□□ 0.89
MYOD1-201ENST00000250003 YBX3P16989 372 aaKnown RBP eCLIP20.61■□□□□ 0.89
MYOD1-201ENST00000250003 ATP8B2P98198 1209 aa20.61■□□□□ 0.89
MYOD1-201ENST00000250003 DDR1Q08345 913 aa20.61■□□□□ 0.89
MYOD1-201ENST00000250003 SH3TC1Q8TE82 1336 aa20.61■□□□□ 0.89
MYOD1-201ENST00000250003 CDHR2Q9BYE9 1310 aa20.61■□□□□ 0.89
MYOD1-201ENST00000250003 NFIXQ14938 502 aa20.6■□□□□ 0.89
MYOD1-201ENST00000250003 NUTM1Q86Y26 1132 aa20.6■□□□□ 0.89
MYOD1-201ENST00000250003 HMMRO75330 724 aa20.6■□□□□ 0.89
MYOD1-201ENST00000250003 FOXO4P98177 505 aa20.6■□□□□ 0.89
MYOD1-201ENST00000250003 CARMIL3Q8ND23 1372 aa20.59■□□□□ 0.89
MYOD1-201ENST00000250003 IRS4O14654 1257 aaPredicted RBP20.59■□□□□ 0.89
MYOD1-201ENST00000250003 MTX1Q13505 466 aa20.59■□□□□ 0.89
MYOD1-201ENST00000250003 POLRMTO00411 1230 aaKnown RBP20.58■□□□□ 0.89
MYOD1-201ENST00000250003 GRIN3BO60391 1043 aa20.58■□□□□ 0.89
MYOD1-201ENST00000250003 TGFB2P61812 414 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms