RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 A0A0G2JS52 829 aa15.04■□□□□ -0
RAB3IP-201ENST00000247833 CCDC171Q6TFL3 1326 aa15.04■□□□□ -0
RAB3IP-201ENST00000247833 LRRC2Q9BYS8 371 aa15.04■□□□□ -0
RAB3IP-201ENST00000247833 TPM2P07951 284 aa15.04■□□□□ -0
RAB3IP-201ENST00000247833 HOXB7P09629 217 aa15.04■□□□□ -0
RAB3IP-201ENST00000247833 BICD2Q8TD16 824 aa15.04■□□□□ -0
RAB3IP-201ENST00000247833 ADCY9O60503 1353 aa15.03■□□□□ -0
RAB3IP-201ENST00000247833 AXIN2Q9Y2T1 843 aa15.03■□□□□ -0
RAB3IP-201ENST00000247833 UQCRHLA0A096LP55 91 aa15.03■□□□□ -0
RAB3IP-201ENST00000247833 UQCRHP07919 91 aa15.03■□□□□ -0
RAB3IP-201ENST00000247833 UBE2HP62256 183 aa15.03■□□□□ -0
RAB3IP-201ENST00000247833 FAM184AQ8NB25 1140 aa15.03■□□□□ -0
RAB3IP-201ENST00000247833 ZSCAN31Q96LW9 406 aaPredicted RBP15.03■□□□□ -0
RAB3IP-201ENST00000247833 TTC12Q9H892 705 aaPredicted RBP15.03■□□□□ -0
RAB3IP-201ENST00000247833 NOL7Q9UMY1 257 aaKnown RBP15.03■□□□□ -0
RAB3IP-201ENST00000247833 OFD1O75665 1012 aa15.03■□□□□ -0
RAB3IP-201ENST00000247833 ADCY5O95622 1261 aa15.03■□□□□ -0
RAB3IP-201ENST00000247833 A0A0D9SFI3 127 aa15.02■□□□□ -0
RAB3IP-201ENST00000247833 ME3Q16798 604 aa15.02■□□□□ -0
RAB3IP-201ENST00000247833 CKAP2LQ8IYA6 745 aa15.02■□□□□ -0
RAB3IP-201ENST00000247833 DDX21Q9NR30 783 aaKnown RBP eCLIP15.02■□□□□ -0
RAB3IP-201ENST00000247833 HIP1O00291 1037 aa15.02□□□□□ -0.01
RAB3IP-201ENST00000247833 KRT85P78386 507 aa15.02□□□□□ -0.01
RAB3IP-201ENST00000247833 DDX46Q7L014 1031 aaKnown RBP15.02□□□□□ -0.01
RAB3IP-201ENST00000247833 CCDC85AQ96PX6 553 aaPredicted RBP15.02□□□□□ -0.01
RAB3IP-201ENST00000247833 A0A087WZG4 1122 aa15.01□□□□□ -0.01
RAB3IP-201ENST00000247833 C17orf53Q8N3J3 647 aaPredicted RBP15.01□□□□□ -0.01
RAB3IP-201ENST00000247833 FBXW7Q969H0 707 aa15.01□□□□□ -0.01
RAB3IP-201ENST00000247833 SH2B1Q9NRF2 756 aaPredicted RBP15.01□□□□□ -0.01
RAB3IP-201ENST00000247833 UBR1Q8IWV7 1749 aa15.01□□□□□ -0.01
RAB3IP-201ENST00000247833 SASH1O94885 1247 aa15.01□□□□□ -0.01
RAB3IP-201ENST00000247833 ZNF790Q6PG37 636 aa15.01□□□□□ -0.01
RAB3IP-201ENST00000247833 CCDC129Q6ZRS4 1044 aa15.01□□□□□ -0.01
RAB3IP-201ENST00000247833 ANKRD13DQ6ZTN6 518 aa15.01□□□□□ -0.01
RAB3IP-201ENST00000247833 GORABQ5T7V8 394 aa15.01□□□□□ -0.01
RAB3IP-201ENST00000247833 ARHGEF25Q86VW2 580 aa15.01□□□□□ -0.01
RAB3IP-201ENST00000247833 VPS53Q5VIR6 699 aa15□□□□□ -0.01
RAB3IP-201ENST00000247833 ZNF496Q96IT1 587 aaPredicted RBP15□□□□□ -0.01
RAB3IP-201ENST00000247833 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15□□□□□ -0.01
RAB3IP-201ENST00000247833 ATF3P18847 181 aa15□□□□□ -0.01
RAB3IP-201ENST00000247833 CABP4P57796 275 aa15□□□□□ -0.01
RAB3IP-201ENST00000247833 SLC27A2O14975 620 aa14.99□□□□□ -0.01
RAB3IP-201ENST00000247833 TTC14Q96N46 770 aa14.99□□□□□ -0.01
RAB3IP-201ENST00000247833 TPCN1Q9ULQ1 816 aa14.99□□□□□ -0.01
RAB3IP-201ENST00000247833 TFCP2Q12800 502 aa14.99□□□□□ -0.01
RAB3IP-201ENST00000247833 USP16Q9Y5T5 823 aa14.99□□□□□ -0.01
RAB3IP-201ENST00000247833 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.99□□□□□ -0.01
RAB3IP-201ENST00000247833 PDCP20941 246 aa14.99□□□□□ -0.01
RAB3IP-201ENST00000247833 SPATA32Q96LK8 384 aa14.99□□□□□ -0.01
RAB3IP-201ENST00000247833 BCL11BQ9C0K0 894 aaPredicted RBP14.99□□□□□ -0.01
RAB3IP-201ENST00000247833 CDC37L1Q7L3B6 337 aa14.98□□□□□ -0.01
RAB3IP-201ENST00000247833 MTMR6Q9Y217 621 aa14.98□□□□□ -0.01
RAB3IP-201ENST00000247833 RRP9O43818 475 aaKnown RBP14.98□□□□□ -0.01
RAB3IP-201ENST00000247833 RGPD8O14715 1765 aaPredicted RBP14.98□□□□□ -0.01
RAB3IP-201ENST00000247833 CEMIPQ8WUJ3 1361 aa14.98□□□□□ -0.01
RAB3IP-201ENST00000247833 LETM1O95202 739 aaPredicted RBP14.98□□□□□ -0.01
RAB3IP-201ENST00000247833 SEC62Q99442 399 aaKnown RBP14.98□□□□□ -0.01
RAB3IP-201ENST00000247833 ANKARQ7Z5J8 1434 aa14.97□□□□□ -0.01
RAB3IP-201ENST00000247833 CHGBP05060 677 aa14.97□□□□□ -0.01
RAB3IP-201ENST00000247833 EPHA10Q5JZY3 1008 aa14.97□□□□□ -0.01
RAB3IP-201ENST00000247833 ZNF589Q86UQ0 364 aaPredicted RBP14.97□□□□□ -0.01
RAB3IP-201ENST00000247833 NUP62CLQ9H1M0 184 aa14.97□□□□□ -0.01
RAB3IP-201ENST00000247833 CCDC192P0DO97 292 aa14.97□□□□□ -0.01
RAB3IP-201ENST00000247833 HS1BP3Q53T59 392 aa14.97□□□□□ -0.01
RAB3IP-201ENST00000247833 PDLIM2Q96JY6 352 aa14.97□□□□□ -0.01
RAB3IP-201ENST00000247833 TNMDQ9H2S6 317 aa14.97□□□□□ -0.01
RAB3IP-201ENST00000247833 IGKV5-2P06315 115 aa14.97□□□□□ -0.01
RAB3IP-201ENST00000247833 GCKRQ14397 625 aa14.97□□□□□ -0.01
RAB3IP-201ENST00000247833 DBNDD2Q9BQY9 259 aa14.97□□□□□ -0.01
RAB3IP-201ENST00000247833 ZSWIM6Q9HCJ5 1215 aa14.97□□□□□ -0.01
RAB3IP-201ENST00000247833 TAF6LQ9Y6J9 622 aa14.97□□□□□ -0.01
RAB3IP-201ENST00000247833 RPAP1Q9BWH6 1393 aaPredicted RBP14.97□□□□□ -0.01
RAB3IP-201ENST00000247833 ANKRD1Q15327 319 aa14.96□□□□□ -0.01
RAB3IP-201ENST00000247833 LMBR1LQ6UX01 489 aa14.96□□□□□ -0.01
RAB3IP-201ENST00000247833 ZBTB3Q9H5J0 574 aa14.96□□□□□ -0.01
RAB3IP-201ENST00000247833 NEURL1BA8MQ27 555 aa14.96□□□□□ -0.01
RAB3IP-201ENST00000247833 GOLIM4O00461 696 aa14.96□□□□□ -0.01
RAB3IP-201ENST00000247833 GUCY1B3Q02153 619 aa14.96□□□□□ -0.01
RAB3IP-201ENST00000247833 TAF7LQ5H9L4 462 aa14.96□□□□□ -0.01
RAB3IP-201ENST00000247833 COL9A3Q14050 684 aaPredicted RBP14.96□□□□□ -0.02
RAB3IP-201ENST00000247833 CCT2P78371 535 aaKnown RBP14.95□□□□□ -0.02
RAB3IP-201ENST00000247833 IFNL2Q8IZJ0 200 aa14.95□□□□□ -0.02
RAB3IP-201ENST00000247833 BRF1Q92994 677 aa14.95□□□□□ -0.02
RAB3IP-201ENST00000247833 JAK2O60674 1132 aa14.95□□□□□ -0.02
RAB3IP-201ENST00000247833 MAP3K11Q16584 847 aa14.95□□□□□ -0.02
RAB3IP-201ENST00000247833 DACT1Q9NYF0 836 aa14.95□□□□□ -0.02
RAB3IP-201ENST00000247833 KDM4AO75164 1064 aa14.95□□□□□ -0.02
RAB3IP-201ENST00000247833 SNRPA1P09661 255 aaKnown RBP14.95□□□□□ -0.02
RAB3IP-201ENST00000247833 NECTIN1Q15223 517 aa14.95□□□□□ -0.02
RAB3IP-201ENST00000247833 SLC52A2Q9HAB3 445 aa14.95□□□□□ -0.02
RAB3IP-201ENST00000247833 FKBP4Q02790 459 aaKnown RBP eCLIP14.94□□□□□ -0.02
RAB3IP-201ENST00000247833 NEK1Q96PY6 1258 aa14.94□□□□□ -0.02
RAB3IP-201ENST00000247833 EPB41L2O43491 1005 aaKnown RBP14.94□□□□□ -0.02
RAB3IP-201ENST00000247833 MTX1Q13505 466 aa14.94□□□□□ -0.02
RAB3IP-201ENST00000247833 WASHC4Q2M389 1173 aa14.94□□□□□ -0.02
RAB3IP-201ENST00000247833 SASS6Q6UVJ0 657 aa14.94□□□□□ -0.02
RAB3IP-201ENST00000247833 CHST3Q7LGC8 479 aa14.94□□□□□ -0.02
RAB3IP-201ENST00000247833 FMNL2Q96PY5 1086 aa14.94□□□□□ -0.02
RAB3IP-201ENST00000247833 TRIM5Q9C035 493 aa14.94□□□□□ -0.02
RAB3IP-201ENST00000247833 SNRKQ9NRH2 765 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms