RNA–Protein interactions for RNA: ENST00000247295.4

FAM78A-201, Transcript of family with sequence similarity 78 member A, humanhuman

TSL 2

Gene FAM78A, Length 4,560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78A-201ENST00000247295 MAP3K19Q56UN5 1328 aa13.19□□□□□ -0.3
FAM78A-201ENST00000247295 KCNA6P17658 529 aa13.19□□□□□ -0.3
FAM78A-201ENST00000247295 ODF2Q5BJF6 829 aa13.19□□□□□ -0.3
FAM78A-201ENST00000247295 USP16Q9Y5T5 823 aa13.19□□□□□ -0.3
FAM78A-201ENST00000247295 NUP160Q12769 1436 aa13.19□□□□□ -0.3
FAM78A-201ENST00000247295 STIM1Q13586 685 aa13.19□□□□□ -0.3
FAM78A-201ENST00000247295 G2E3Q7L622 706 aa13.19□□□□□ -0.3
FAM78A-201ENST00000247295 GRM8O00222 908 aa13.18□□□□□ -0.3
FAM78A-201ENST00000247295 U2AF2P26368 475 aaKnown RBP eCLIP13.18□□□□□ -0.3
FAM78A-201ENST00000247295 CADPS2Q86UW7 1296 aa13.18□□□□□ -0.3
FAM78A-201ENST00000247295 ZNF219Q9P2Y4 722 aaPredicted RBP13.18□□□□□ -0.3
FAM78A-201ENST00000247295 CFAP65Q6ZU64 1925 aaKnown RBP13.18□□□□□ -0.3
FAM78A-201ENST00000247295 DZIP1Q86YF9 867 aaKnown RBP13.18□□□□□ -0.3
FAM78A-201ENST00000247295 NEK1Q96PY6 1258 aa13.18□□□□□ -0.3
FAM78A-201ENST00000247295 ESYT1Q9BSJ8 1104 aa13.18□□□□□ -0.3
FAM78A-201ENST00000247295 SLC12A7Q9Y666 1083 aa13.18□□□□□ -0.3
FAM78A-201ENST00000247295 CEP85Q6P2H3 762 aa13.18□□□□□ -0.3
FAM78A-201ENST00000247295 GIMAP6Q6P9H5 292 aa13.18□□□□□ -0.3
FAM78A-201ENST00000247295 FSIP1Q8NA03 581 aa13.18□□□□□ -0.3
FAM78A-201ENST00000247295 OTUD7AQ8TE49 926 aaPredicted RBP13.18□□□□□ -0.3
FAM78A-201ENST00000247295 WDR62O43379 1518 aa13.18□□□□□ -0.3
FAM78A-201ENST00000247295 MPHOSPH10O00566 681 aaKnown RBP13.17□□□□□ -0.3
FAM78A-201ENST00000247295 ATP8B2P98198 1209 aa13.17□□□□□ -0.3
FAM78A-201ENST00000247295 BMS1Q14692 1282 aaKnown RBP13.17□□□□□ -0.3
FAM78A-201ENST00000247295 C10orf67Q8IYJ2 551 aa13.17□□□□□ -0.3
FAM78A-201ENST00000247295 SLC5A1P13866 664 aa13.17□□□□□ -0.3
FAM78A-201ENST00000247295 SFPQP23246 707 aaKnown RBP eCLIP13.17□□□□□ -0.3
FAM78A-201ENST00000247295 C17orf53Q8N3J3 647 aaPredicted RBP13.17□□□□□ -0.3
FAM78A-201ENST00000247295 ORC3Q9UBD5 711 aaPredicted RBP13.17□□□□□ -0.3
FAM78A-201ENST00000247295 DACH1Q9UI36 760 aa13.17□□□□□ -0.3
FAM78A-201ENST00000247295 FBXO3Q9UK99 471 aa13.17□□□□□ -0.3
FAM78A-201ENST00000247295 ZNF518AQ6AHZ1 1483 aa13.17□□□□□ -0.3
FAM78A-201ENST00000247295 TTC21AQ8NDW8 1320 aa13.17□□□□□ -0.3
FAM78A-201ENST00000247295 GOLGA8AA7E2F4 631 aa13.17□□□□□ -0.3
FAM78A-201ENST00000247295 KIF20AO95235 890 aa13.17□□□□□ -0.3
FAM78A-201ENST00000247295 WASF1Q92558 559 aa13.17□□□□□ -0.3
FAM78A-201ENST00000247295 RBM8AQ9Y5S9 174 aaKnown RBP13.17□□□□□ -0.3
FAM78A-201ENST00000247295 KIAA0556O60303 1618 aa13.17□□□□□ -0.3
FAM78A-201ENST00000247295 DTNBO60941 627 aa13.17□□□□□ -0.3
FAM78A-201ENST00000247295 MNAT1P51948 309 aa13.17□□□□□ -0.3
FAM78A-201ENST00000247295 SMC5Q8IY18 1101 aa13.17□□□□□ -0.3
FAM78A-201ENST00000247295 CTCFLQ8NI51 663 aaPredicted RBP13.16□□□□□ -0.3
FAM78A-201ENST00000247295 ZNF526Q8TF50 670 aaPredicted RBP13.16□□□□□ -0.3
FAM78A-201ENST00000247295 DCTPP1Q9H773 170 aa13.16□□□□□ -0.3
FAM78A-201ENST00000247295 ZSWIM4Q9H7M6 989 aa13.16□□□□□ -0.3
FAM78A-201ENST00000247295 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.16□□□□□ -0.33e-9■■□□□ 12.9
FAM78A-201ENST00000247295 HMGB1P09429 215 aaKnown RBP13.16□□□□□ -0.3
FAM78A-201ENST00000247295 CEP135Q66GS9 1140 aa13.16□□□□□ -0.3
FAM78A-201ENST00000247295 KSR2Q6VAB6 950 aa13.16□□□□□ -0.3
FAM78A-201ENST00000247295 IQCA1Q86XH1 822 aa13.16□□□□□ -0.3
FAM78A-201ENST00000247295 ACSBG1Q96GR2 724 aa13.16□□□□□ -0.3
FAM78A-201ENST00000247295 ZGPATQ8N5A5 531 aaKnown RBP13.16□□□□□ -0.3
FAM78A-201ENST00000247295 WDR7Q9Y4E6 1490 aa13.16□□□□□ -0.3
FAM78A-201ENST00000247295 TMEM132AQ24JP5 1023 aa13.15□□□□□ -0.3
FAM78A-201ENST00000247295 CCDC186Q7Z3E2 898 aa13.15□□□□□ -0.3
FAM78A-201ENST00000247295 NPATQ14207 1427 aa13.15□□□□□ -0.3
FAM78A-201ENST00000247295 ITSN2Q9NZM3 1697 aa13.15□□□□□ -0.3
FAM78A-201ENST00000247295 GCP02774 474 aa13.15□□□□□ -0.3
FAM78A-201ENST00000247295 HSPA2P54652 639 aa13.15□□□□□ -0.3
FAM78A-201ENST00000247295 PLEKHM2Q8IWE5 1019 aa13.15□□□□□ -0.3
FAM78A-201ENST00000247295 ZCRB1Q8TBF4 217 aaKnown RBP13.15□□□□□ -0.3
FAM78A-201ENST00000247295 ANO10Q9NW15 660 aa13.15□□□□□ -0.31
FAM78A-201ENST00000247295 CTTNBP2Q8WZ74 1663 aa13.14□□□□□ -0.31
FAM78A-201ENST00000247295 EIF5P55010 431 aaKnown RBP13.14□□□□□ -0.31
FAM78A-201ENST00000247295 TMEM67Q5HYA8 995 aa13.14□□□□□ -0.31
FAM78A-201ENST00000247295 CHST3Q7LGC8 479 aa13.14□□□□□ -0.31
FAM78A-201ENST00000247295 RBSNQ9H1K0 784 aa13.14□□□□□ -0.31
FAM78A-201ENST00000247295 PIK3C2GO75747 1445 aa13.14□□□□□ -0.31
FAM78A-201ENST00000247295 FLT4P35916 1363 aa13.14□□□□□ -0.31
FAM78A-201ENST00000247295 CCDC196A0A1B0GTZ2 297 aa13.14□□□□□ -0.31
FAM78A-201ENST00000247295 CBFA2T2O43439 604 aa13.14□□□□□ -0.31
FAM78A-201ENST00000247295 CPA1P15085 419 aa13.14□□□□□ -0.31
FAM78A-201ENST00000247295 ZNF165P49910 485 aa13.14□□□□□ -0.31
FAM78A-201ENST00000247295 AKAP4Q5JQC9 854 aa13.14□□□□□ -0.31
FAM78A-201ENST00000247295 CPLX3Q8WVH0 158 aa13.14□□□□□ -0.31
FAM78A-201ENST00000247295 CNPY2Q9Y2B0 182 aa13.14□□□□□ -0.31
FAM78A-201ENST00000247295 C6orf229H3BNL8 230 aa13.14□□□□□ -0.31
FAM78A-201ENST00000247295 HELBQ8NG08 1087 aaPredicted RBP13.14□□□□□ -0.31
FAM78A-201ENST00000247295 SMTNL1A8MU46 457 aa13.13□□□□□ -0.31
FAM78A-201ENST00000247295 IARSP41252 1262 aaKnown RBP13.13□□□□□ -0.31
FAM78A-201ENST00000247295 TICAM2Q86XR7 235 aa13.13□□□□□ -0.31
FAM78A-201ENST00000247295 LINS1Q8NG48 757 aa13.13□□□□□ -0.31
FAM78A-201ENST00000247295 BMP2KQ9NSY1 1161 aaPredicted RBP13.13□□□□□ -0.31
FAM78A-201ENST00000247295 KIF2AO00139 706 aaPredicted RBP13.13□□□□□ -0.31
FAM78A-201ENST00000247295 ZBTB7BO15156 539 aaPredicted RBP13.13□□□□□ -0.31
FAM78A-201ENST00000247295 KLF18A0A0U1RQI7 1052 aa13.13□□□□□ -0.31
FAM78A-201ENST00000247295 ZNF76P36508 570 aa13.13□□□□□ -0.31
FAM78A-201ENST00000247295 ARHGAP29Q52LW3 1261 aa13.13□□□□□ -0.31
FAM78A-201ENST00000247295 TRMT1LQ7Z2T5 733 aaKnown RBP13.13□□□□□ -0.31
FAM78A-201ENST00000247295 VAT1LQ9HCJ6 419 aa13.13□□□□□ -0.31
FAM78A-201ENST00000247295 ZNF444Q8N0Y2 327 aaPredicted RBP13.12□□□□□ -0.31
FAM78A-201ENST00000247295 CRACR2BQ8N4Y2 399 aaPredicted RBP13.12□□□□□ -0.31
FAM78A-201ENST00000247295 CNNM3Q8NE01 707 aa13.12□□□□□ -0.31
FAM78A-201ENST00000247295 SRRTQ9BXP5 876 aaKnown RBP13.12□□□□□ -0.31
FAM78A-201ENST00000247295 TRIM35Q9UPQ4 493 aa13.12□□□□□ -0.31
FAM78A-201ENST00000247295 HSP90AA4PQ58FG1 418 aa13.12□□□□□ -0.31
FAM78A-201ENST00000247295 RSPH14Q9UHP6 348 aa13.12□□□□□ -0.31
FAM78A-201ENST00000247295 ATP2B3Q16720 1220 aa13.12□□□□□ -0.31
FAM78A-201ENST00000247295 JAKMIP3Q5VZ66 844 aa13.12□□□□□ -0.31
FAM78A-201ENST00000247295 SLC26A6Q9BXS9 759 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms