RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 STYK1Q6J9G0 422 aa16.66■□□□□ 0.26
PDZD11-201ENST00000239666 C16orf71Q8IYS4 520 aaPredicted RBP16.66■□□□□ 0.26
PDZD11-201ENST00000239666 SPRYD3Q8NCJ5 442 aa16.66■□□□□ 0.26
PDZD11-201ENST00000239666 ZNF526Q8TF50 670 aaPredicted RBP16.66■□□□□ 0.26
PDZD11-201ENST00000239666 ZNF622Q969S3 477 aaKnown RBP eCLIP16.66■□□□□ 0.26
PDZD11-201ENST00000239666 MASTLQ96GX5 879 aa16.66■□□□□ 0.26
PDZD11-201ENST00000239666 CFAP44Q96MT7 982 aa16.66■□□□□ 0.26
PDZD11-201ENST00000239666 LAMB4A4D0S4 1761 aa16.65■□□□□ 0.26
PDZD11-201ENST00000239666 BCORQ6W2J9 1755 aa16.65■□□□□ 0.26
PDZD11-201ENST00000239666 RNF181Q9P0P0 153 aa16.65■□□□□ 0.26
PDZD11-201ENST00000239666 NIP7Q9Y221 180 aaKnown RBP eCLIP16.65■□□□□ 0.26
PDZD11-201ENST00000239666 KDM3BQ7LBC6 1761 aa16.64■□□□□ 0.25
PDZD11-201ENST00000239666 ALDH1B1P30837 517 aa16.64■□□□□ 0.25
PDZD11-201ENST00000239666 CALD1Q05682 793 aaKnown RBP16.64■□□□□ 0.25
PDZD11-201ENST00000239666 DPY19L2Q6NUT2 758 aa16.64■□□□□ 0.25
PDZD11-201ENST00000239666 SP7Q8TDD2 431 aaPredicted RBP16.64■□□□□ 0.25
PDZD11-201ENST00000239666 MIS18AQ9NYP9 233 aa16.64■□□□□ 0.25
PDZD11-201ENST00000239666 NBPF26B4DH59 902 aa16.63■□□□□ 0.25
PDZD11-201ENST00000239666 NBPF10Q6P3W6 841 aaKnown RBP16.63■□□□□ 0.25
PDZD11-201ENST00000239666 NBPF15Q8N660 670 aa16.63■□□□□ 0.25
PDZD11-201ENST00000239666 PRKRIP1Q9H875 184 aaPredicted RBP16.63■□□□□ 0.25
PDZD11-201ENST00000239666 PRAMEF22A3QJZ6 481 aa16.62■□□□□ 0.25
PDZD11-201ENST00000239666 TTLL13PA6NNM8 815 aa16.62■□□□□ 0.25
PDZD11-201ENST00000239666 SRGNP10124 158 aa16.62■□□□□ 0.25
PDZD11-201ENST00000239666 NPR1P16066 1061 aa16.62■□□□□ 0.25
PDZD11-201ENST00000239666 GRIPAP1Q4V328 841 aa16.62■□□□□ 0.25
PDZD11-201ENST00000239666 BMP2KQ9NSY1 1161 aaPredicted RBP16.62■□□□□ 0.25
PDZD11-201ENST00000239666 RRP7AQ9Y3A4 280 aaKnown RBP16.62■□□□□ 0.25
PDZD11-201ENST00000239666 SBF1O95248 1867 aa16.61■□□□□ 0.25
PDZD11-201ENST00000239666 MAP3K15Q6ZN16 1313 aa16.61■□□□□ 0.25
PDZD11-201ENST00000239666 KLRG2A4D1S0 409 aaPredicted RBP16.6■□□□□ 0.25
PDZD11-201ENST00000239666 KIF3CO14782 793 aa16.6■□□□□ 0.25
PDZD11-201ENST00000239666 HOXB7P09629 217 aa16.6■□□□□ 0.25
PDZD11-201ENST00000239666 HSPA6P17066 643 aa16.6■□□□□ 0.25
PDZD11-201ENST00000239666 HSP90AB3PQ58FF7 597 aa16.6■□□□□ 0.25
PDZD11-201ENST00000239666 PPP1R42Q7Z4L9 355 aa16.6■□□□□ 0.25
PDZD11-201ENST00000239666 LTBP3Q9NS15 1303 aa16.6■□□□□ 0.25
PDZD11-201ENST00000239666 PIP4K2AP48426 406 aaPredicted RBP16.59■□□□□ 0.25
PDZD11-201ENST00000239666 PARP10Q53GL7 1025 aa16.59■□□□□ 0.25
PDZD11-201ENST00000239666 RBM46Q8TBY0 533 aaKnown RBP16.59■□□□□ 0.25
PDZD11-201ENST00000239666 IBTKQ9P2D0 1353 aaPredicted RBP16.59■□□□□ 0.25
PDZD11-201ENST00000239666 GLTPD2A6NH11 291 aa16.58■□□□□ 0.24
PDZD11-201ENST00000239666 C21orf2O43822 256 aa16.58■□□□□ 0.24
PDZD11-201ENST00000239666 MYL6BP14649 208 aa16.58■□□□□ 0.24
PDZD11-201ENST00000239666 FSTL1Q12841 308 aa16.58■□□□□ 0.24
PDZD11-201ENST00000239666 NEUROD2Q15784 382 aa16.58■□□□□ 0.24
PDZD11-201ENST00000239666 CC2D2BQ6DHV5 1058 aa16.58■□□□□ 0.24
PDZD11-201ENST00000239666 GIGYF2Q6Y7W6 1299 aaKnown RBP16.58■□□□□ 0.24
PDZD11-201ENST00000239666 RTKN2Q8IZC4 609 aa16.58■□□□□ 0.24
PDZD11-201ENST00000239666 NGEFQ8N5V2 710 aa16.58■□□□□ 0.24
PDZD11-201ENST00000239666 EFCAB3Q8N7B9 438 aa16.58■□□□□ 0.24
PDZD11-201ENST00000239666 THUMPD2Q9BTF0 503 aaKnown RBP16.58■□□□□ 0.24
PDZD11-201ENST00000239666 TMX4Q9H1E5 349 aaPredicted RBP16.58■□□□□ 0.24
PDZD11-201ENST00000239666 TAOK3Q9H2K8 898 aa16.58■□□□□ 0.24
PDZD11-201ENST00000239666 RYDENQ9NUL5 291 aaKnown RBP16.58■□□□□ 0.24
PDZD11-201ENST00000239666 ADAMTS8Q9UP79 889 aa16.58■□□□□ 0.24
PDZD11-201ENST00000239666 RNF123Q5XPI4 1314 aa16.58■□□□□ 0.24
PDZD11-201ENST00000239666 ANKRD31Q8N7Z5 1873 aa16.58■□□□□ 0.24
PDZD11-201ENST00000239666 CHL1O00533 1208 aa16.57■□□□□ 0.24
PDZD11-201ENST00000239666 VEGFAP15692 232 aaPredicted RBP16.57■□□□□ 0.24
PDZD11-201ENST00000239666 APLP1P51693 650 aa16.57■□□□□ 0.24
PDZD11-201ENST00000239666 PRPF40BQ6NWY9 871 aaKnown RBP16.57■□□□□ 0.24
PDZD11-201ENST00000239666 DCBLD2Q96PD2 775 aa16.57■□□□□ 0.24
PDZD11-201ENST00000239666 NUP98P52948 1817 aa16.56■□□□□ 0.24
PDZD11-201ENST00000239666 EIF2S2P20042 333 aaKnown RBP16.56■□□□□ 0.24
PDZD11-201ENST00000239666 MKRN3Q13064 507 aaKnown RBP16.56■□□□□ 0.24
PDZD11-201ENST00000239666 CCDC93Q567U6 631 aa16.56■□□□□ 0.24
PDZD11-201ENST00000239666 TNRC6CQ9HCJ0 1690 aaKnown RBP16.56■□□□□ 0.24
PDZD11-201ENST00000239666 HLFQ16534 295 aa16.55■□□□□ 0.24
PDZD11-201ENST00000239666 ERFEQ4G0M1 354 aa16.55■□□□□ 0.24
PDZD11-201ENST00000239666 ARFGEF2Q9Y6D5 1785 aa16.55■□□□□ 0.24
PDZD11-201ENST00000239666 CCDC88AQ3V6T2 1871 aa16.54■□□□□ 0.24
PDZD11-201ENST00000239666 RIC1Q4ADV7 1423 aa16.54■□□□□ 0.24
PDZD11-201ENST00000239666 CCDC146Q8IYE0 955 aa16.54■□□□□ 0.24
PDZD11-201ENST00000239666 RPGRQ92834 1020 aaKnown RBP16.54■□□□□ 0.24
PDZD11-201ENST00000239666 DDX21Q9NR30 783 aaKnown RBP eCLIP16.54■□□□□ 0.24
PDZD11-201ENST00000239666 FER1L6Q2WGJ9 1857 aa16.54■□□□□ 0.24
PDZD11-201ENST00000239666 DICER1Q9UPY3 1922 aaKnown RBP16.53■□□□□ 0.24
PDZD11-201ENST00000239666 NFKBIEO00221 500 aa16.53■□□□□ 0.24
PDZD11-201ENST00000239666 GNAI1P63096 354 aa16.53■□□□□ 0.24
PDZD11-201ENST00000239666 RASSF7Q02833 373 aa16.53■□□□□ 0.24
PDZD11-201ENST00000239666 ZNF34Q8IZ26 560 aa16.53■□□□□ 0.24
PDZD11-201ENST00000239666 CCDC24Q8N4L8 307 aa16.53■□□□□ 0.24
PDZD11-201ENST00000239666 RBM17Q96I25 401 aaKnown RBP16.53■□□□□ 0.24
PDZD11-201ENST00000239666 NLRP3Q96P20 1036 aa16.53■□□□□ 0.24
PDZD11-201ENST00000239666 RRAGCQ9HB90 399 aa16.53■□□□□ 0.24
PDZD11-201ENST00000239666 NMRK2Q9NPI5 230 aa16.53■□□□□ 0.24
PDZD11-201ENST00000239666 DBF4Q9UBU7 674 aaPredicted RBP16.53■□□□□ 0.24
PDZD11-201ENST00000239666 TRIM35Q9UPQ4 493 aa16.53■□□□□ 0.24
PDZD11-201ENST00000239666 LAS1LQ9Y4W2 734 aaKnown RBP16.53■□□□□ 0.24
PDZD11-201ENST00000239666 FAM177BA6PVY3 158 aa16.52■□□□□ 0.24
PDZD11-201ENST00000239666 HSP90B1P14625 803 aaKnown RBP16.52■□□□□ 0.24
PDZD11-201ENST00000239666 CRY2Q49AN0 593 aa16.52■□□□□ 0.24
PDZD11-201ENST00000239666 TTLL7Q6ZT98 887 aa16.52■□□□□ 0.24
PDZD11-201ENST00000239666 SMC1BQ8NDV3 1235 aa16.52■□□□□ 0.24
PDZD11-201ENST00000239666 ZBTB3Q9H5J0 574 aa16.52■□□□□ 0.24
PDZD11-201ENST00000239666 ATMINO43313 823 aaPredicted RBP16.51■□□□□ 0.23
PDZD11-201ENST00000239666 GTPBP6O43824 516 aaPredicted RBP16.51■□□□□ 0.23
PDZD11-201ENST00000239666 HOXA10P31260 410 aaPredicted RBP16.51■□□□□ 0.23
PDZD11-201ENST00000239666 FKBP4Q02790 459 aaKnown RBP eCLIP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms