RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 GPATCH3Q96I76 525 aa10.98□□□□□ -0.65
SYDE2-201ENST00000234668 SLC52A2Q9HAB3 445 aa10.98□□□□□ -0.65
SYDE2-201ENST00000234668 CYP46A1Q9Y6A2 500 aa10.98□□□□□ -0.65
SYDE2-201ENST00000234668 TCHHQ07283 1943 aa10.98□□□□□ -0.65
SYDE2-201ENST00000234668 TTC41PQ6P2S7 1318 aa10.98□□□□□ -0.65
SYDE2-201ENST00000234668 CYP27B1O15528 508 aa10.98□□□□□ -0.65
SYDE2-201ENST00000234668 TATP17735 454 aaPredicted RBP10.98□□□□□ -0.65
SYDE2-201ENST00000234668 MTX1Q13505 466 aa10.98□□□□□ -0.65
SYDE2-201ENST00000234668 GCKRQ14397 625 aa10.98□□□□□ -0.65
SYDE2-201ENST00000234668 GIMAP6Q6P9H5 292 aa10.98□□□□□ -0.65
SYDE2-201ENST00000234668 RUFY2Q8WXA3 655 aa10.98□□□□□ -0.65
SYDE2-201ENST00000234668 EVI5LQ96CN4 794 aa10.98□□□□□ -0.65
SYDE2-201ENST00000234668 CCDC85AQ96PX6 553 aaPredicted RBP10.98□□□□□ -0.65
SYDE2-201ENST00000234668 ADGRL3Q9HAR2 1447 aa10.97□□□□□ -0.65
SYDE2-201ENST00000234668 LRRC37A3O60309 1634 aa10.97□□□□□ -0.65
SYDE2-201ENST00000234668 MBD3O95983 291 aa10.97□□□□□ -0.65
SYDE2-201ENST00000234668 PHKG2P15735 406 aa10.97□□□□□ -0.65
SYDE2-201ENST00000234668 NPHP3Q7Z494 1330 aa10.97□□□□□ -0.65
SYDE2-201ENST00000234668 NECTIN1Q15223 517 aa10.97□□□□□ -0.65
SYDE2-201ENST00000234668 LARP1Q6PKG0 1096 aaKnown RBP10.97□□□□□ -0.65
SYDE2-201ENST00000234668 DDX46Q7L014 1031 aaKnown RBP10.97□□□□□ -0.65
SYDE2-201ENST00000234668 TTC5Q8N0Z6 440 aa10.97□□□□□ -0.65
SYDE2-201ENST00000234668 TSPY26PQ9H489 355 aa10.97□□□□□ -0.65
SYDE2-201ENST00000234668 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.97□□□□□ -0.65
SYDE2-201ENST00000234668 TFIP11Q9UBB9 837 aaKnown RBP10.97□□□□□ -0.65
SYDE2-201ENST00000234668 CCDC171Q6TFL3 1326 aa10.97□□□□□ -0.65
SYDE2-201ENST00000234668 A0A087WZG4 1122 aa10.96□□□□□ -0.65
SYDE2-201ENST00000234668 SLC27A2O14975 620 aa10.96□□□□□ -0.65
SYDE2-201ENST00000234668 PTMAP06454 111 aaKnown RBP10.96□□□□□ -0.65
SYDE2-201ENST00000234668 ZKSCAN1P17029 563 aaPredicted RBP10.96□□□□□ -0.65
SYDE2-201ENST00000234668 NEUROD6Q96NK8 337 aa10.96□□□□□ -0.65
SYDE2-201ENST00000234668 PXDNLA1KZ92 1463 aa10.96□□□□□ -0.66
SYDE2-201ENST00000234668 F13A1P00488 732 aa10.96□□□□□ -0.66
SYDE2-201ENST00000234668 HCLS1P14317 486 aaPredicted RBP10.96□□□□□ -0.66
SYDE2-201ENST00000234668 ATF3P18847 181 aa10.96□□□□□ -0.66
SYDE2-201ENST00000234668 ERC1Q8IUD2 1116 aa10.96□□□□□ -0.66
SYDE2-201ENST00000234668 DBNDD2Q9BQY9 259 aa10.96□□□□□ -0.66
SYDE2-201ENST00000234668 DBNLQ9UJU6 430 aaKnown RBP10.96□□□□□ -0.66
SYDE2-201ENST00000234668 TIMM10P62072 90 aa10.95□□□□□ -0.66
SYDE2-201ENST00000234668 DDX11Q96FC9 970 aa10.95□□□□□ -0.66
SYDE2-201ENST00000234668 USP25Q9UHP3 1055 aa10.95□□□□□ -0.66
SYDE2-201ENST00000234668 TAOK2Q9UL54 1235 aa10.95□□□□□ -0.66
SYDE2-201ENST00000234668 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.95□□□□□ -0.66
SYDE2-201ENST00000234668 CABP4P57796 275 aa10.95□□□□□ -0.66
SYDE2-201ENST00000234668 CAMK4Q16566 473 aa10.95□□□□□ -0.66
SYDE2-201ENST00000234668 ZNF594Q96JF6 807 aaPredicted RBP10.95□□□□□ -0.66
SYDE2-201ENST00000234668 METTL22Q9BUU2 404 aaPredicted RBP10.95□□□□□ -0.66
SYDE2-201ENST00000234668 C19orf44Q9H6X5 657 aa10.95□□□□□ -0.66
SYDE2-201ENST00000234668 ZSWIM6Q9HCJ5 1215 aa10.95□□□□□ -0.66
SYDE2-201ENST00000234668 MTMR6Q9Y217 621 aa10.95□□□□□ -0.66
SYDE2-201ENST00000234668 R3HCC1Q9Y3T6 440 aaKnown RBP10.95□□□□□ -0.66
SYDE2-201ENST00000234668 A1BGP04217 495 aa10.95□□□□□ -0.66
SYDE2-201ENST00000234668 HSPA2P54652 639 aa10.95□□□□□ -0.66
SYDE2-201ENST00000234668 LARP1BQ659C4 914 aaKnown RBP10.95□□□□□ -0.66
SYDE2-201ENST00000234668 LMBR1LQ6UX01 489 aa10.95□□□□□ -0.66
SYDE2-201ENST00000234668 TTLL7Q6ZT98 887 aa10.95□□□□□ -0.66
SYDE2-201ENST00000234668 ZBTB3Q9H5J0 574 aa10.95□□□□□ -0.66
SYDE2-201ENST00000234668 A0A0G2JLW4 131 aa10.94□□□□□ -0.66
SYDE2-201ENST00000234668 PTPN12Q05209 780 aaKnown RBP10.94□□□□□ -0.66
SYDE2-201ENST00000234668 CDC37L1Q7L3B6 337 aa10.94□□□□□ -0.66
SYDE2-201ENST00000234668 IFNL2Q8IZJ0 200 aa10.94□□□□□ -0.66
SYDE2-201ENST00000234668 C17orf53Q8N3J3 647 aaPredicted RBP10.94□□□□□ -0.66
SYDE2-201ENST00000234668 MAP4K1Q92918 833 aa10.94□□□□□ -0.66
SYDE2-201ENST00000234668 CHMP4AQ9BY43 222 aa10.94□□□□□ -0.66
SYDE2-201ENST00000234668 HEG1Q9ULI3 1381 aa10.94□□□□□ -0.66
SYDE2-201ENST00000234668 USP42Q9H9J4 1324 aaKnown RBP10.94□□□□□ -0.66
SYDE2-201ENST00000234668 NPHP4O75161 1426 aaPredicted RBP10.94□□□□□ -0.66
SYDE2-201ENST00000234668 JAK2O60674 1132 aa10.93□□□□□ -0.66
SYDE2-201ENST00000234668 SNRPA1P09661 255 aaKnown RBP10.93□□□□□ -0.66
SYDE2-201ENST00000234668 VPS53Q5VIR6 699 aa10.93□□□□□ -0.66
SYDE2-201ENST00000234668 NAP1L2Q9ULW6 460 aaPredicted RBP10.93□□□□□ -0.66
SYDE2-201ENST00000234668 RBM10P98175 930 aaKnown RBP10.93□□□□□ -0.66
SYDE2-201ENST00000234668 CEBPZQ03701 1054 aaKnown RBP10.93□□□□□ -0.66
SYDE2-201ENST00000234668 BLOC1S2Q6QNY1 142 aa10.93□□□□□ -0.66
SYDE2-201ENST00000234668 PDLIM2Q96JY6 352 aa10.93□□□□□ -0.66
SYDE2-201ENST00000234668 ARID3AQ99856 593 aa10.93□□□□□ -0.66
SYDE2-201ENST00000234668 KDM6AO15550 1401 aaPredicted RBP10.93□□□□□ -0.66
SYDE2-201ENST00000234668 CACNA1FO60840 1977 aa10.93□□□□□ -0.66
SYDE2-201ENST00000234668 CHST3Q7LGC8 479 aa10.93□□□□□ -0.66
SYDE2-201ENST00000234668 TNNI3KQ59H18 835 aa10.92□□□□□ -0.66
SYDE2-201ENST00000234668 SYAP1Q96A49 352 aaPredicted RBP10.92□□□□□ -0.66
SYDE2-201ENST00000234668 FPGT-TNNI3KV9GXZ4 949 aa10.92□□□□□ -0.66
SYDE2-201ENST00000234668 NBPF26B4DH59 902 aa10.92□□□□□ -0.66
SYDE2-201ENST00000234668 NBPF14Q5TI25 921 aa10.92□□□□□ -0.66
SYDE2-201ENST00000234668 NBPF10Q6P3W6 841 aaKnown RBP10.92□□□□□ -0.66
SYDE2-201ENST00000234668 NBPF15Q8N660 670 aa10.92□□□□□ -0.66
SYDE2-201ENST00000234668 IL17RAQ96F46 866 aa10.92□□□□□ -0.66
SYDE2-201ENST00000234668 TTC12Q9H892 705 aaPredicted RBP10.92□□□□□ -0.66
SYDE2-201ENST00000234668 STRN4Q9NRL3 753 aa10.92□□□□□ -0.66
SYDE2-201ENST00000234668 COL15A1P39059 1388 aa10.92□□□□□ -0.66
SYDE2-201ENST00000234668 TUBGCP6Q96RT7 1819 aa10.91□□□□□ -0.66
SYDE2-201ENST00000234668 GOLIM4O00461 696 aa10.91□□□□□ -0.66
SYDE2-201ENST00000234668 TAF5LO75529 589 aa10.91□□□□□ -0.66
SYDE2-201ENST00000234668 LRP10Q7Z4F1 713 aa10.91□□□□□ -0.66
SYDE2-201ENST00000234668 FMNL2Q96PY5 1086 aa10.91□□□□□ -0.66
SYDE2-201ENST00000234668 SNRKQ9NRH2 765 aa10.91□□□□□ -0.66
SYDE2-201ENST00000234668 NOL7Q9UMY1 257 aaKnown RBP10.91□□□□□ -0.66
SYDE2-201ENST00000234668 MEGF6O75095 1541 aa10.91□□□□□ -0.66
SYDE2-201ENST00000234668 CHD2O14647 1828 aaKnown RBP10.91□□□□□ -0.66
SYDE2-201ENST00000234668 C1orf167Q5SNV9 1468 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms