RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 MIEF2Q96C03 454 aa15.2■□□□□ 0.02
MSH2-201ENST00000233146 CLSTN2Q9H4D0 955 aa15.2■□□□□ 0.02
MSH2-201ENST00000233146 APOBRQ0VD83 1088 aa15.19■□□□□ 0.02
MSH2-201ENST00000233146 CCDC30Q5VVM6 783 aa15.19■□□□□ 0.02
MSH2-201ENST00000233146 TTLL5Q6EMB2 1281 aa15.19■□□□□ 0.02
MSH2-201ENST00000233146 OSBPL5Q9H0X9 879 aaPredicted RBP15.19■□□□□ 0.02
MSH2-201ENST00000233146 DDX19AQ9NUU7 478 aaKnown RBP15.19■□□□□ 0.02
MSH2-201ENST00000233146 PPFIA4O75335 1185 aa15.19■□□□□ 0.02
MSH2-201ENST00000233146 INHBEP58166 350 aa15.19■□□□□ 0.02
MSH2-201ENST00000233146 LONRF2Q1L5Z9 754 aa15.19■□□□□ 0.02
MSH2-201ENST00000233146 ERC1Q8IUD2 1116 aa15.19■□□□□ 0.02
MSH2-201ENST00000233146 NSD3Q9BZ95 1437 aa15.19■□□□□ 0.02
MSH2-201ENST00000233146 OSBPL3Q9H4L5 887 aa15.19■□□□□ 0.02
MSH2-201ENST00000233146 BSDC1Q9NW68 430 aaPredicted RBP15.19■□□□□ 0.02
MSH2-201ENST00000233146 DNAI1Q9UI46 699 aa15.19■□□□□ 0.02
MSH2-201ENST00000233146 AKAP2Q9Y2D5 859 aa15.19■□□□□ 0.02
MSH2-201ENST00000233146 TRAPPC8Q9Y2L5 1435 aa15.19■□□□□ 0.02
MSH2-201ENST00000233146 CHMP3Q9Y3E7 222 aa15.19■□□□□ 0.02
MSH2-201ENST00000233146 NBPF6Q5VWK0 638 aa15.19■□□□□ 0.02
MSH2-201ENST00000233146 NBPF4Q96M43 638 aa15.19■□□□□ 0.02
MSH2-201ENST00000233146 SSH2Q76I76 1423 aa15.18■□□□□ 0.02
MSH2-201ENST00000233146 GOLGA6L19H0YKK7 550 aa15.18■□□□□ 0.02
MSH2-201ENST00000233146 SRGAP3O43295 1099 aa15.18■□□□□ 0.02
MSH2-201ENST00000233146 ERLIN2O94905 339 aa15.18■□□□□ 0.02
MSH2-201ENST00000233146 MSL3Q8N5Y2 521 aaKnown RBP15.18■□□□□ 0.02
MSH2-201ENST00000233146 PLCD4Q9BRC7 762 aa15.18■□□□□ 0.02
MSH2-201ENST00000233146 PARD6BQ9BYG5 372 aa15.18■□□□□ 0.02
MSH2-201ENST00000233146 FAM107BQ9H098 131 aa15.18■□□□□ 0.02
MSH2-201ENST00000233146 NBPF9Q3BBW0 867 aa15.18■□□□□ 0.02
MSH2-201ENST00000233146 SMC3Q9UQE7 1217 aa15.18■□□□□ 0.02
MSH2-201ENST00000233146 DUOX2Q9NRD8 1548 aa15.18■□□□□ 0.02
MSH2-201ENST00000233146 UNC13BO14795 1591 aa15.18■□□□□ 0.02
MSH2-201ENST00000233146 RAPGEF6Q8TEU7 1601 aa15.18■□□□□ 0.02
MSH2-201ENST00000233146 ANKRD44Q8N8A2 993 aa15.17■□□□□ 0.02
MSH2-201ENST00000233146 GNL3LQ9NVN8 582 aaKnown RBP15.17■□□□□ 0.02
MSH2-201ENST00000233146 TRIM65Q6PJ69 517 aa15.17■□□□□ 0.02
MSH2-201ENST00000233146 RSRC2Q7L4I2 434 aaKnown RBP15.17■□□□□ 0.02
MSH2-201ENST00000233146 CHMP7Q8WUX9 453 aaPredicted RBP15.17■□□□□ 0.02
MSH2-201ENST00000233146 PDE11AQ9HCR9 933 aa15.17■□□□□ 0.02
MSH2-201ENST00000233146 KIF24Q5T7B8 1368 aa15.17■□□□□ 0.02
MSH2-201ENST00000233146 CALR3Q96L12 384 aaKnown RBP15.17■□□□□ 0.02
MSH2-201ENST00000233146 PARP3Q9Y6F1 533 aa15.17■□□□□ 0.02
MSH2-201ENST00000233146 FANCGO15287 622 aa15.16■□□□□ 0.02
MSH2-201ENST00000233146 URB2Q14146 1524 aaKnown RBP15.16■□□□□ 0.02
MSH2-201ENST00000233146 CCDC151A5D8V7 595 aa15.16■□□□□ 0.02
MSH2-201ENST00000233146 ZKSCAN8Q15776 578 aaPredicted RBP15.16■□□□□ 0.02
MSH2-201ENST00000233146 ANO2Q9NQ90 1003 aa15.16■□□□□ 0.02
MSH2-201ENST00000233146 IMPACTQ9P2X3 320 aa15.16■□□□□ 0.02
MSH2-201ENST00000233146 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.16■□□□□ 0.02
MSH2-201ENST00000233146 FANCAO15360 1455 aa15.15■□□□□ 0.02
MSH2-201ENST00000233146 IFT140Q96RY7 1462 aa15.15■□□□□ 0.02
MSH2-201ENST00000233146 URI1O94763 535 aaPredicted RBP15.15■□□□□ 0.02
MSH2-201ENST00000233146 GNAI1P63096 354 aa15.15■□□□□ 0.02
MSH2-201ENST00000233146 JAKMIP3Q5VZ66 844 aa15.15■□□□□ 0.02
MSH2-201ENST00000233146 ATP10DQ9P241 1426 aa15.15■□□□□ 0.02
MSH2-201ENST00000233146 NBPF11Q86T75 865 aa15.15■□□□□ 0.02
MSH2-201ENST00000233146 HOMER1Q86YM7 354 aa15.15■□□□□ 0.02
MSH2-201ENST00000233146 RABGGTAQ92696 567 aa15.15■□□□□ 0.02
MSH2-201ENST00000233146 FAN1Q9Y2M0 1017 aa15.15■□□□□ 0.02
MSH2-201ENST00000233146 TTC21AQ8NDW8 1320 aa15.15■□□□□ 0.02
MSH2-201ENST00000233146 VAMP4O75379 141 aa15.15■□□□□ 0.02
MSH2-201ENST00000233146 SSR1P43307 286 aaKnown RBP15.15■□□□□ 0.02
MSH2-201ENST00000233146 KRT85P78386 507 aa15.15■□□□□ 0.02
MSH2-201ENST00000233146 GBP6Q6ZN66 633 aa15.15■□□□□ 0.02
MSH2-201ENST00000233146 BORCS6Q96GS4 357 aa15.15■□□□□ 0.02
MSH2-201ENST00000233146 TTC14Q96N46 770 aa15.15■□□□□ 0.02
MSH2-201ENST00000233146 H0YHG0 523 aa15.14■□□□□ 0.01
MSH2-201ENST00000233146 SARNPP82979 210 aaKnown RBP15.14■□□□□ 0.01
MSH2-201ENST00000233146 BRD3Q15059 726 aa15.14■□□□□ 0.01
MSH2-201ENST00000233146 GIMAP7Q8NHV1 300 aa15.14■□□□□ 0.01
MSH2-201ENST00000233146 ANKRD33BA6NCL7 494 aa15.14■□□□□ 0.01
MSH2-201ENST00000233146 PDE1AP54750 535 aa15.14■□□□□ 0.01
MSH2-201ENST00000233146 TRAK1Q9UPV9 953 aa15.14■□□□□ 0.01
MSH2-201ENST00000233146 SPHKAPQ2M3C7 1700 aa15.14■□□□□ 0.01
MSH2-201ENST00000233146 ELF1P32519 619 aa15.14■□□□□ 0.01
MSH2-201ENST00000233146 LIMCH1Q9UPQ0 1083 aa15.14■□□□□ 0.01
MSH2-201ENST00000233146 IQGAP3Q86VI3 1631 aa15.13■□□□□ 0.01
MSH2-201ENST00000233146 TUBGCP6Q96RT7 1819 aa15.13■□□□□ 0.01
MSH2-201ENST00000233146 ERCC3P19447 782 aa15.13■□□□□ 0.01
MSH2-201ENST00000233146 IRX1P78414 480 aaPredicted RBP15.13■□□□□ 0.01
MSH2-201ENST00000233146 VPS53Q5VIR6 699 aa15.13■□□□□ 0.01
MSH2-201ENST00000233146 C11orf57Q6ZUT1 292 aaPredicted RBP15.13■□□□□ 0.01
MSH2-201ENST00000233146 RPAP2Q8IXW5 612 aaPredicted RBP15.13■□□□□ 0.01
MSH2-201ENST00000233146 CCDC150Q8NCX0 1101 aa15.13■□□□□ 0.01
MSH2-201ENST00000233146 HNRNPLLQ8WVV9 542 aaKnown RBP15.13■□□□□ 0.01
MSH2-201ENST00000233146 USP32Q8NFA0 1604 aa15.13■□□□□ 0.01
MSH2-201ENST00000233146 CPLX2Q6PUV4 134 aaKnown RBP15.13■□□□□ 0.01
MSH2-201ENST00000233146 RUFY3Q7L099 469 aa15.13■□□□□ 0.01
MSH2-201ENST00000233146 PLEKHA4Q9H4M7 779 aa15.13■□□□□ 0.01
MSH2-201ENST00000233146 EXOC5O00471 708 aa15.12■□□□□ 0.01
MSH2-201ENST00000233146 PTPRTO14522 1441 aa15.12■□□□□ 0.01
MSH2-201ENST00000233146 EPB41L2O43491 1005 aaKnown RBP15.12■□□□□ 0.01
MSH2-201ENST00000233146 N4BP1O75113 896 aaKnown RBP15.12■□□□□ 0.01
MSH2-201ENST00000233146 CHMLP26374 656 aa15.12■□□□□ 0.01
MSH2-201ENST00000233146 GJB2P29033 226 aa15.12■□□□□ 0.01
MSH2-201ENST00000233146 HSPA4P34932 840 aa15.12■□□□□ 0.01
MSH2-201ENST00000233146 FBXW10Q5XX13 1052 aa15.12■□□□□ 0.01
MSH2-201ENST00000233146 NAIF1Q69YI7 327 aaPredicted RBP15.12■□□□□ 0.01
MSH2-201ENST00000233146 ARMCX5Q6P1M9 558 aa15.12■□□□□ 0.01
MSH2-201ENST00000233146 MCM8Q9UJA3 840 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms