RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 CCDC191Q8NCU4 936 aa6.72□□□□□ -1.33
RFX4-201ENST00000229387 A1CFQ9NQ94 594 aaKnown RBP6.72□□□□□ -1.33
RFX4-201ENST00000229387 MIS18AQ9NYP9 233 aa6.72□□□□□ -1.33
RFX4-201ENST00000229387 TRIM35Q9UPQ4 493 aa6.72□□□□□ -1.33
RFX4-201ENST00000229387 VWDEQ8N2E2 1590 aa6.72□□□□□ -1.33
RFX4-201ENST00000229387 MAGEA8P43361 318 aa6.71□□□□□ -1.33
RFX4-201ENST00000229387 TRAF1Q13077 416 aa6.71□□□□□ -1.33
RFX4-201ENST00000229387 MYBPC2Q14324 1141 aa6.71□□□□□ -1.33
RFX4-201ENST00000229387 RNF20Q5VTR2 975 aa6.71□□□□□ -1.33
RFX4-201ENST00000229387 SDR16C5Q8N3Y7 309 aa6.71□□□□□ -1.33
RFX4-201ENST00000229387 TSPYL6Q8N831 410 aa6.71□□□□□ -1.33
RFX4-201ENST00000229387 GLMNQ92990 594 aa6.71□□□□□ -1.33
RFX4-201ENST00000229387 NOB1Q9ULX3 412 aaKnown RBP6.71□□□□□ -1.33
RFX4-201ENST00000229387 MYOM2P54296 1465 aa6.71□□□□□ -1.34
RFX4-201ENST00000229387 SND1Q7KZF4 910 aaKnown RBP eCLIP6.71□□□□□ -1.34
RFX4-201ENST00000229387 MIEF2Q96C03 454 aa6.71□□□□□ -1.34
RFX4-201ENST00000229387 IQGAP1P46940 1657 aa6.71□□□□□ -1.34
RFX4-201ENST00000229387 ARAP3Q8WWN8 1544 aa6.71□□□□□ -1.34
RFX4-201ENST00000229387 POLR3AO14802 1390 aaPredicted RBP6.71□□□□□ -1.34
RFX4-201ENST00000229387 METP08581 1390 aa6.71□□□□□ -1.34
RFX4-201ENST00000229387 ANKRD36BQ8N2N9 1353 aa6.71□□□□□ -1.34
RFX4-201ENST00000229387 BAG4O95429 457 aaKnown RBP6.71□□□□□ -1.34
RFX4-201ENST00000229387 RBM5P52756 815 aaKnown RBP eCLIP6.71□□□□□ -1.34
RFX4-201ENST00000229387 TPM4P67936 248 aa6.71□□□□□ -1.34
RFX4-201ENST00000229387 ZRSR2Q15696 482 aaKnown RBP6.71□□□□□ -1.34
RFX4-201ENST00000229387 KMT5BQ4FZB7 885 aa6.71□□□□□ -1.34
RFX4-201ENST00000229387 DDX46Q7L014 1031 aaKnown RBP6.71□□□□□ -1.34
RFX4-201ENST00000229387 FMNL3Q8IVF7 1028 aa6.71□□□□□ -1.34
RFX4-201ENST00000229387 PCDHB8Q9UN66 801 aa6.71□□□□□ -1.34
RFX4-201ENST00000229387 AMOTL2Q9Y2J4 779 aa6.71□□□□□ -1.34
RFX4-201ENST00000229387 PCDHB13Q9Y5F0 798 aa6.71□□□□□ -1.34
RFX4-201ENST00000229387 TSPOAP1O95153 1857 aa6.7□□□□□ -1.34
RFX4-201ENST00000229387 SYNMO15061 1565 aa6.7□□□□□ -1.34
RFX4-201ENST00000229387 YTHDC2Q9H6S0 1430 aaKnown RBP6.7□□□□□ -1.34
RFX4-201ENST00000229387 DPYSL4O14531 572 aa6.7□□□□□ -1.34
RFX4-201ENST00000229387 TPM1P09493 284 aa6.7□□□□□ -1.34
RFX4-201ENST00000229387 NUDT16Q96DE0 195 aaKnown RBP6.7□□□□□ -1.34
RFX4-201ENST00000229387 LTV1Q96GA3 475 aaPredicted RBP6.7□□□□□ -1.34
RFX4-201ENST00000229387 C22orf23Q9BZE7 217 aa6.7□□□□□ -1.34
RFX4-201ENST00000229387 ADGRB3O60242 1522 aa6.7□□□□□ -1.34
RFX4-201ENST00000229387 DEPDC5O75140 1603 aa6.7□□□□□ -1.34
RFX4-201ENST00000229387 SMC2O95347 1197 aa6.7□□□□□ -1.34
RFX4-201ENST00000229387 IVLP07476 585 aa6.7□□□□□ -1.34
RFX4-201ENST00000229387 TRIM27P14373 513 aa6.7□□□□□ -1.34
RFX4-201ENST00000229387 SCP2P22307 547 aa6.7□□□□□ -1.34
RFX4-201ENST00000229387 ICA1Q05084 483 aa6.7□□□□□ -1.34
RFX4-201ENST00000229387 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.7□□□□□ -1.34
RFX4-201ENST00000229387 PDZRN3Q9UPQ7 1066 aa6.7□□□□□ -1.34
RFX4-201ENST00000229387 HECW2Q9P2P5 1572 aa6.7□□□□□ -1.34
RFX4-201ENST00000229387 PTPRCP08575 1304 aa6.7□□□□□ -1.34
RFX4-201ENST00000229387 ADGRB1O14514 1584 aa6.69□□□□□ -1.34
RFX4-201ENST00000229387 BRD1O95696 1058 aa6.69□□□□□ -1.34
RFX4-201ENST00000229387 FAM163BP0C2L3 166 aa6.69□□□□□ -1.34
RFX4-201ENST00000229387 FOSBP53539 338 aa6.69□□□□□ -1.34
RFX4-201ENST00000229387 CCDC30Q5VVM6 783 aa6.69□□□□□ -1.34
RFX4-201ENST00000229387 NUTM1Q86Y26 1132 aa6.69□□□□□ -1.34
RFX4-201ENST00000229387 LMBRD1Q9NUN5 540 aa6.69□□□□□ -1.34
RFX4-201ENST00000229387 LRRFIP2Q9Y608 721 aaKnown RBP6.69□□□□□ -1.34
RFX4-201ENST00000229387 TULP4Q9NRJ4 1543 aa6.69□□□□□ -1.34
RFX4-201ENST00000229387 PPFIA2O75334 1257 aa6.69□□□□□ -1.34
RFX4-201ENST00000229387 RPS6KA5O75582 802 aa6.69□□□□□ -1.34
RFX4-201ENST00000229387 LTKP29376 864 aa6.69□□□□□ -1.34
RFX4-201ENST00000229387 ABCD1P33897 745 aa6.69□□□□□ -1.34
RFX4-201ENST00000229387 CAVIN1Q6NZI2 390 aaKnown RBP6.69□□□□□ -1.34
RFX4-201ENST00000229387 DZIP1LQ8IYY4 767 aaKnown RBP6.69□□□□□ -1.34
RFX4-201ENST00000229387 TMEM57Q8N5G2 664 aa6.69□□□□□ -1.34
RFX4-201ENST00000229387 NLRP7Q8WX94 980 aa6.69□□□□□ -1.34
RFX4-201ENST00000229387 UBXN6Q9BZV1 441 aa6.69□□□□□ -1.34
RFX4-201ENST00000229387 KDM5AP29375 1690 aaKnown RBP6.69□□□□□ -1.34
RFX4-201ENST00000229387 ATAD2Q6PL18 1390 aa6.69□□□□□ -1.34
RFX4-201ENST00000229387 KINO60870 393 aaKnown RBP6.69□□□□□ -1.34
RFX4-201ENST00000229387 SETSIPP0DME0 302 aa6.69□□□□□ -1.34
RFX4-201ENST00000229387 RWDD2BP57060 319 aa6.69□□□□□ -1.34
RFX4-201ENST00000229387 AP1ARQ63HQ0 302 aa6.69□□□□□ -1.34
RFX4-201ENST00000229387 PLEKHF1Q96S99 279 aa6.69□□□□□ -1.34
RFX4-201ENST00000229387 SH3GL3Q99963 347 aa6.69□□□□□ -1.34
RFX4-201ENST00000229387 SGIP1Q9BQI5 828 aa6.69□□□□□ -1.34
RFX4-201ENST00000229387 MYOM1P52179 1685 aa6.69□□□□□ -1.34
RFX4-201ENST00000229387 ATP8B1O43520 1251 aa6.68□□□□□ -1.34
RFX4-201ENST00000229387 CAND2O75155 1236 aa6.68□□□□□ -1.34
RFX4-201ENST00000229387 GRIK3Q13003 919 aa6.68□□□□□ -1.34
RFX4-201ENST00000229387 ZKSCAN2Q63HK3 967 aa6.68□□□□□ -1.34
RFX4-201ENST00000229387 WWC2Q6AWC2 1192 aa6.68□□□□□ -1.34
RFX4-201ENST00000229387 MCM10Q7L590 875 aa6.68□□□□□ -1.34
RFX4-201ENST00000229387 CCDC26Q8TAB7 109 aa6.68□□□□□ -1.34
RFX4-201ENST00000229387 PHF8Q9UPP1 1060 aa6.68□□□□□ -1.34
RFX4-201ENST00000229387 KIF1BO60333 1816 aa6.68□□□□□ -1.34
RFX4-201ENST00000229387 WASLO00401 505 aaPredicted RBP6.68□□□□□ -1.34
RFX4-201ENST00000229387 CCP110O43303 1012 aa6.68□□□□□ -1.34
RFX4-201ENST00000229387 POLD1P28340 1107 aa6.68□□□□□ -1.34
RFX4-201ENST00000229387 CORO7P57737 925 aa6.68□□□□□ -1.34
RFX4-201ENST00000229387 AMHR2Q16671 573 aa6.68□□□□□ -1.34
RFX4-201ENST00000229387 HSP90AB2PQ58FF8 381 aa6.68□□□□□ -1.34
RFX4-201ENST00000229387 SIGLEC1Q9BZZ2 1709 aa6.68□□□□□ -1.34
RFX4-201ENST00000229387 LNPKQ9C0E8 428 aa6.68□□□□□ -1.34
RFX4-201ENST00000229387 ZSCAN16Q9H4T2 348 aaPredicted RBP6.68□□□□□ -1.34
RFX4-201ENST00000229387 DIP2CQ9Y2E4 1556 aa6.68□□□□□ -1.34
RFX4-201ENST00000229387 FOXO3O43524 673 aa6.68□□□□□ -1.34
RFX4-201ENST00000229387 HTATSF1O43719 755 aaKnown RBP6.68□□□□□ -1.34
RFX4-201ENST00000229387 USP8P40818 1118 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms