RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 IBSPP21815 317 aaPredicted RBP16.98■□□□□ 0.31
PRDM4-201ENST00000228437 LRRC8AQ8IWT6 810 aa16.98■□□□□ 0.31
PRDM4-201ENST00000228437 CPLX3Q8WVH0 158 aa16.98■□□□□ 0.31
PRDM4-201ENST00000228437 CARD6Q9BX69 1037 aa16.98■□□□□ 0.31
PRDM4-201ENST00000228437 IRX5P78411 483 aaPredicted RBP16.97■□□□□ 0.31
PRDM4-201ENST00000228437 RIC3Q7Z5B4 369 aa16.97■□□□□ 0.31
PRDM4-201ENST00000228437 CLSTN2Q9H4D0 955 aa16.97■□□□□ 0.31
PRDM4-201ENST00000228437 HYPKQ9NX55 129 aa16.97■□□□□ 0.31
PRDM4-201ENST00000228437 SOS1Q07889 1333 aaPredicted RBP16.97■□□□□ 0.31
PRDM4-201ENST00000228437 GPATCH11Q8N954 259 aa16.97■□□□□ 0.31
PRDM4-201ENST00000228437 EDC3Q96F86 508 aaKnown RBP16.97■□□□□ 0.31
PRDM4-201ENST00000228437 FAM193AP78312 1265 aa16.97■□□□□ 0.31
PRDM4-201ENST00000228437 VPS53Q5VIR6 699 aa16.97■□□□□ 0.31
PRDM4-201ENST00000228437 C11orf57Q6ZUT1 292 aaPredicted RBP16.97■□□□□ 0.31
PRDM4-201ENST00000228437 NEMFO60524 1076 aa16.96■□□□□ 0.31
PRDM4-201ENST00000228437 GYS2P54840 703 aa16.96■□□□□ 0.31
PRDM4-201ENST00000228437 OTUD7BQ6GQQ9 843 aa16.96■□□□□ 0.31
PRDM4-201ENST00000228437 HNRNPH2P55795 449 aaKnown RBP16.96■□□□□ 0.31
PRDM4-201ENST00000228437 ANKRD7Q92527 254 aa16.96■□□□□ 0.31
PRDM4-201ENST00000228437 EPC1Q9H2F5 836 aa16.96■□□□□ 0.31
PRDM4-201ENST00000228437 ZNF853P0CG23 659 aa16.96■□□□□ 0.31
PRDM4-201ENST00000228437 NCBP3Q53F19 620 aaKnown RBP16.96■□□□□ 0.31
PRDM4-201ENST00000228437 DHX37Q8IY37 1157 aaKnown RBP16.96■□□□□ 0.31
PRDM4-201ENST00000228437 UTP14AQ9BVJ6 771 aaKnown RBP16.96■□□□□ 0.31
PRDM4-201ENST00000228437 ZCCHC17Q9NP64 241 aaKnown RBP16.96■□□□□ 0.31
PRDM4-201ENST00000228437 TTC37Q6PGP7 1564 aa16.96■□□□□ 0.31
PRDM4-201ENST00000228437 GOLGA8FQ08AF8 430 aa16.95■□□□□ 0.3
PRDM4-201ENST00000228437 GOLGA8DPQ0D2H9 430 aa16.95■□□□□ 0.3
PRDM4-201ENST00000228437 Q6ZUG5 572 aa16.95■□□□□ 0.3
PRDM4-201ENST00000228437 KIF2AO00139 706 aaPredicted RBP16.95■□□□□ 0.3
PRDM4-201ENST00000228437 MYL6BP14649 208 aa16.95■□□□□ 0.3
PRDM4-201ENST00000228437 WASHC4Q2M389 1173 aa16.95■□□□□ 0.3
PRDM4-201ENST00000228437 OLFM4Q6UX06 510 aa16.95■□□□□ 0.3
PRDM4-201ENST00000228437 IQSEC2Q5JU85 1478 aa16.95■□□□□ 0.3
PRDM4-201ENST00000228437 KLHDC4Q8TBB5 520 aa16.95■□□□□ 0.3
PRDM4-201ENST00000228437 DNAAF4Q8WXU2 420 aa16.95■□□□□ 0.3
PRDM4-201ENST00000228437 GNAT3A8MTJ3 354 aa16.94■□□□□ 0.3
PRDM4-201ENST00000228437 WASLO00401 505 aaPredicted RBP16.94■□□□□ 0.3
PRDM4-201ENST00000228437 KARSQ15046 597 aaKnown RBP16.94■□□□□ 0.3
PRDM4-201ENST00000228437 CCDC129Q6ZRS4 1044 aa16.94■□□□□ 0.3
PRDM4-201ENST00000228437 RSPH14Q9UHP6 348 aa16.94■□□□□ 0.3
PRDM4-201ENST00000228437 ARHGEF5Q12774 1597 aa16.94■□□□□ 0.3
PRDM4-201ENST00000228437 TOP1P11387 765 aaKnown RBP16.94■□□□□ 0.3
PRDM4-201ENST00000228437 LSG1Q9H089 658 aaKnown RBP16.94■□□□□ 0.3
PRDM4-201ENST00000228437 USP44Q9H0E7 712 aa16.94■□□□□ 0.3
PRDM4-201ENST00000228437 NCOA5Q9HCD5 579 aaKnown RBP16.94■□□□□ 0.3
PRDM4-201ENST00000228437 APPP05067 770 aa16.94■□□□□ 0.3
PRDM4-201ENST00000228437 SLC3A2P08195 630 aaKnown RBP16.94■□□□□ 0.3
PRDM4-201ENST00000228437 EVCP57679 992 aa16.94■□□□□ 0.3
PRDM4-201ENST00000228437 GSDMDP57764 484 aa16.94■□□□□ 0.3
PRDM4-201ENST00000228437 OSBPL3Q9H4L5 887 aa16.94■□□□□ 0.3
PRDM4-201ENST00000228437 CHPF2Q9P2E5 772 aa16.94■□□□□ 0.3
PRDM4-201ENST00000228437 A0A0G2JS52 829 aa16.93■□□□□ 0.3
PRDM4-201ENST00000228437 MARCKSP29966 332 aaPredicted RBP16.93■□□□□ 0.3
PRDM4-201ENST00000228437 NOM1Q5C9Z4 860 aaKnown RBP16.93■□□□□ 0.3
PRDM4-201ENST00000228437 NEK1Q96PY6 1258 aa16.93■□□□□ 0.3
PRDM4-201ENST00000228437 ADGRL1O94910 1474 aa16.93■□□□□ 0.3
PRDM4-201ENST00000228437 PLXNC1O60486 1568 aa16.93■□□□□ 0.3
PRDM4-201ENST00000228437 PAXIP1Q6ZW49 1069 aaPredicted RBP16.93■□□□□ 0.3
PRDM4-201ENST00000228437 PTCH1Q13635 1447 aa16.93■□□□□ 0.3
PRDM4-201ENST00000228437 CASQ1P31415 396 aa16.93■□□□□ 0.3
PRDM4-201ENST00000228437 EVI5LQ96CN4 794 aa16.93■□□□□ 0.3
PRDM4-201ENST00000228437 SBNO2Q9Y2G9 1366 aa16.92■□□□□ 0.3
PRDM4-201ENST00000228437 CWF19L2Q2TBE0 894 aaKnown RBP16.92■□□□□ 0.3
PRDM4-201ENST00000228437 TMEM51Q9NW97 253 aa16.92■□□□□ 0.3
PRDM4-201ENST00000228437 SLC52A1Q9NWF4 448 aa16.92■□□□□ 0.3
PRDM4-201ENST00000228437 SLFN14P0C7P3 912 aa16.92■□□□□ 0.3
PRDM4-201ENST00000228437 DDX46Q7L014 1031 aaKnown RBP16.92■□□□□ 0.3
PRDM4-201ENST00000228437 PUF60Q9UHX1 559 aaKnown RBP16.92■□□□□ 0.3
PRDM4-201ENST00000228437 CROCC2H7BZ55 1655 aa16.92■□□□□ 0.3
PRDM4-201ENST00000228437 ANKRD65E5RJM6 399 aa16.92■□□□□ 0.3
PRDM4-201ENST00000228437 NEXNQ0ZGT2 675 aa16.92■□□□□ 0.3
PRDM4-201ENST00000228437 HIP1O00291 1037 aa16.91■□□□□ 0.3
PRDM4-201ENST00000228437 HAND2P61296 217 aa16.91■□□□□ 0.3
PRDM4-201ENST00000228437 XPO4Q9C0E2 1151 aaKnown RBP16.91■□□□□ 0.3
PRDM4-201ENST00000228437 RPAP1Q9BWH6 1393 aaPredicted RBP16.91■□□□□ 0.3
PRDM4-201ENST00000228437 SLC27A2O14975 620 aa16.91■□□□□ 0.3
PRDM4-201ENST00000228437 OAS2P29728 719 aaKnown RBP16.91■□□□□ 0.3
PRDM4-201ENST00000228437 APOBRQ0VD83 1088 aa16.91■□□□□ 0.3
PRDM4-201ENST00000228437 UBASH3AP57075 661 aa16.91■□□□□ 0.3
PRDM4-201ENST00000228437 CCDC12Q8WUD4 166 aaPredicted RBP16.91■□□□□ 0.3
PRDM4-201ENST00000228437 ARFGAP3Q9NP61 516 aa16.91■□□□□ 0.3
PRDM4-201ENST00000228437 VPS18Q9P253 973 aa16.91■□□□□ 0.3
PRDM4-201ENST00000228437 HDAC5Q9UQL6 1122 aa16.91■□□□□ 0.3
PRDM4-201ENST00000228437 MADDQ8WXG6 1647 aa16.91■□□□□ 0.3
PRDM4-201ENST00000228437 KLHL10Q6JEL2 608 aa16.91■□□□□ 0.3
PRDM4-201ENST00000228437 CAPN2P17655 700 aa16.9■□□□□ 0.3
PRDM4-201ENST00000228437 CLCN6P51797 869 aa16.9■□□□□ 0.3
PRDM4-201ENST00000228437 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.9■□□□□ 0.3
PRDM4-201ENST00000228437 CTAGE5O15320 804 aa16.9■□□□□ 0.3
PRDM4-201ENST00000228437 IRX3P78415 501 aaPredicted RBP16.9■□□□□ 0.3
PRDM4-201ENST00000228437 AXDND1Q5T1B0 1012 aaPredicted RBP16.9■□□□□ 0.3
PRDM4-201ENST00000228437 RABEP2Q9H5N1 569 aa16.9■□□□□ 0.3
PRDM4-201ENST00000228437 FANCAO15360 1455 aa16.9■□□□□ 0.3
PRDM4-201ENST00000228437 ERC1Q8IUD2 1116 aa16.89■□□□□ 0.29
PRDM4-201ENST00000228437 CFAP74Q9C0B2 1584 aa16.89■□□□□ 0.29
PRDM4-201ENST00000228437 MPRIPQ6WCQ1 1025 aa16.89■□□□□ 0.29
PRDM4-201ENST00000228437 RASSF4Q9H2L5 321 aa16.89■□□□□ 0.29
PRDM4-201ENST00000228437 MAP3K2Q9Y2U5 619 aa16.89■□□□□ 0.29
PRDM4-201ENST00000228437 TXLNBQ8N3L3 684 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms