RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 ZNF358Q9NW07 568 aa10.33□□□□□ -0.76
CCL1-201ENST00000225842 DCTN4Q9UJW0 460 aa10.33□□□□□ -0.76
CCL1-201ENST00000225842 CDV3Q9UKY7 258 aaKnown RBP10.33□□□□□ -0.76
CCL1-201ENST00000225842 MTUS2Q5JR59 1369 aa10.33□□□□□ -0.76
CCL1-201ENST00000225842 CCDC141Q6ZP82 1450 aa10.33□□□□□ -0.76
CCL1-201ENST00000225842 SETD5Q9C0A6 1442 aa10.33□□□□□ -0.76
CCL1-201ENST00000225842 TET3O43151 1660 aa10.32□□□□□ -0.76
CCL1-201ENST00000225842 EP400Q96L91 3159 aa10.32□□□□□ -0.76
CCL1-201ENST00000225842 SF3B2Q13435 895 aaKnown RBP10.32□□□□□ -0.76
CCL1-201ENST00000225842 IDI1Q13907 227 aa10.32□□□□□ -0.76
CCL1-201ENST00000225842 ECM1Q16610 540 aa10.32□□□□□ -0.76
CCL1-201ENST00000225842 LCE2DQ5TA82 110 aaPredicted RBP10.32□□□□□ -0.76
CCL1-201ENST00000225842 NWD1Q149M9 1564 aa10.31□□□□□ -0.76
CCL1-201ENST00000225842 M0R2N6 131 aa10.31□□□□□ -0.76
CCL1-201ENST00000225842 DIP2AQ14689 1571 aa10.31□□□□□ -0.76
CCL1-201ENST00000225842 POTEMA6NI47 508 aa10.3□□□□□ -0.76
CCL1-201ENST00000225842 ERVH48-1M5A8F1 160 aa10.3□□□□□ -0.76
CCL1-201ENST00000225842 PTCD1O75127 700 aaKnown RBP10.3□□□□□ -0.76
CCL1-201ENST00000225842 STAU1O95793 577 aaKnown RBP10.3□□□□□ -0.76
CCL1-201ENST00000225842 ARHGAP4P98171 946 aa10.3□□□□□ -0.76
CCL1-201ENST00000225842 FBXO33Q7Z6M2 555 aa10.3□□□□□ -0.76
CCL1-201ENST00000225842 ASB16Q96NS5 453 aa10.3□□□□□ -0.76
CCL1-201ENST00000225842 KDM5AP29375 1690 aaKnown RBP10.3□□□□□ -0.76
CCL1-201ENST00000225842 BLMP54132 1417 aaPredicted RBP10.3□□□□□ -0.76
CCL1-201ENST00000225842 FYCO1Q9BQS8 1478 aa10.3□□□□□ -0.76
CCL1-201ENST00000225842 LRP5O75197 1615 aa10.29□□□□□ -0.76
CCL1-201ENST00000225842 PNPLA6Q8IY17 1366 aa10.29□□□□□ -0.76
CCL1-201ENST00000225842 EFCAB6Q5THR3 1501 aa10.29□□□□□ -0.76
CCL1-201ENST00000225842 PPEF1O14829 653 aaPredicted RBP10.29□□□□□ -0.76
CCL1-201ENST00000225842 INTS6LQ5JSJ4 861 aaKnown RBP10.29□□□□□ -0.76
CCL1-201ENST00000225842 CAMSAP2Q08AD1 1489 aa10.29□□□□□ -0.76
CCL1-201ENST00000225842 ARHGAP31Q2M1Z3 1444 aa10.28□□□□□ -0.76
CCL1-201ENST00000225842 TMEM229AB2RXF0 380 aa10.28□□□□□ -0.76
CCL1-201ENST00000225842 TCF3P15923 654 aa10.28□□□□□ -0.76
CCL1-201ENST00000225842 VASH1Q7L8A9 365 aaPredicted RBP10.28□□□□□ -0.76
CCL1-201ENST00000225842 ZSCAN29Q8IWY8 852 aaPredicted RBP10.28□□□□□ -0.76
CCL1-201ENST00000225842 TNS4Q8IZW8 715 aa10.28□□□□□ -0.76
CCL1-201ENST00000225842 SCG3Q8WXD2 468 aaKnown RBP10.28□□□□□ -0.76
CCL1-201ENST00000225842 DDX17Q92841 729 aaKnown RBP10.28□□□□□ -0.76
CCL1-201ENST00000225842 IGFBP4P22692 258 aa10.27□□□□□ -0.77
CCL1-201ENST00000225842 TBX22Q9Y458 520 aa10.27□□□□□ -0.77
CCL1-201ENST00000225842 MAST1Q9Y2H9 1570 aa10.26□□□□□ -0.77
CCL1-201ENST00000225842 ATRNO75882 1429 aa10.26□□□□□ -0.77
CCL1-201ENST00000225842 HELQQ8TDG4 1101 aa10.26□□□□□ -0.77
CCL1-201ENST00000225842 KRTAP3-3Q9BYR6 98 aa10.26□□□□□ -0.77
CCL1-201ENST00000225842 KRTAP3-2Q9BYR7 98 aa10.26□□□□□ -0.77
CCL1-201ENST00000225842 PIK3C2BO00750 1634 aa10.25□□□□□ -0.77
CCL1-201ENST00000225842 ASXL1Q8IXJ9 1541 aa10.25□□□□□ -0.77
CCL1-201ENST00000225842 SENP3-EIF4A1A0A087X0R7 540 aa10.25□□□□□ -0.77
CCL1-201ENST00000225842 ZBTB24O43167 697 aaPredicted RBP10.25□□□□□ -0.77
CCL1-201ENST00000225842 SCNN1DP51172 638 aa10.25□□□□□ -0.77
CCL1-201ENST00000225842 GDF10P55107 478 aa10.25□□□□□ -0.77
CCL1-201ENST00000225842 ARID5BQ14865 1188 aa10.25□□□□□ -0.77
CCL1-201ENST00000225842 COL26A1Q96A83 441 aa10.25□□□□□ -0.77
CCL1-201ENST00000225842 CYLDQ9NQC7 956 aa10.25□□□□□ -0.77
CCL1-201ENST00000225842 SERTAD1Q9UHV2 236 aa10.25□□□□□ -0.77
CCL1-201ENST00000225842 PLEKHG1Q9ULL1 1385 aa10.25□□□□□ -0.77
CCL1-201ENST00000225842 FOXO3O43524 673 aa10.24□□□□□ -0.77
CCL1-201ENST00000225842 ERVK-9P63128 1117 aa10.24□□□□□ -0.77
CCL1-201ENST00000225842 CC2D2BQ6DHV5 1058 aa10.24□□□□□ -0.77
CCL1-201ENST00000225842 VTI1AQ96AJ9 217 aa10.24□□□□□ -0.77
CCL1-201ENST00000225842 OSBPL3Q9H4L5 887 aa10.24□□□□□ -0.77
CCL1-201ENST00000225842 TMPRSS4Q9NRS4 437 aa10.24□□□□□ -0.77
CCL1-201ENST00000225842 MROH1Q8NDA8 1641 aa10.23□□□□□ -0.77
CCL1-201ENST00000225842 VARSP26640 1264 aaKnown RBP10.23□□□□□ -0.77
CCL1-201ENST00000225842 SKOR1P84550 965 aa10.23□□□□□ -0.77
CCL1-201ENST00000225842 TRIM32Q13049 653 aa10.23□□□□□ -0.77
CCL1-201ENST00000225842 RGL4Q8IZJ4 473 aa10.23□□□□□ -0.77
CCL1-201ENST00000225842 TSPAN10Q9H1Z9 355 aaPredicted RBP10.23□□□□□ -0.77
CCL1-201ENST00000225842 MAP4K5Q9Y4K4 846 aa10.23□□□□□ -0.77
CCL1-201ENST00000225842 BACH1O14867 736 aa10.22□□□□□ -0.77
CCL1-201ENST00000225842 FAM13AO94988 1023 aa10.22□□□□□ -0.77
CCL1-201ENST00000225842 MPSTP25325 297 aa10.22□□□□□ -0.77
CCL1-201ENST00000225842 EAPPQ56P03 285 aaPredicted RBP10.22□□□□□ -0.77
CCL1-201ENST00000225842 SLC52A1Q9NWF4 448 aa10.22□□□□□ -0.77
CCL1-201ENST00000225842 CEP162Q5TB80 1403 aa10.22□□□□□ -0.77
CCL1-201ENST00000225842 NHSL1Q5SYE7 1610 aa10.22□□□□□ -0.77
CCL1-201ENST00000225842 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.21□□□□□ -0.77
CCL1-201ENST00000225842 VAMP1P23763 118 aa10.21□□□□□ -0.77
CCL1-201ENST00000225842 BAG6P46379 1132 aa10.21□□□□□ -0.77
CCL1-201ENST00000225842 R3HDM1Q15032 1099 aaKnown RBP10.21□□□□□ -0.77
CCL1-201ENST00000225842 TBCELQ5QJ74 424 aa10.21□□□□□ -0.77
CCL1-201ENST00000225842 SAP130Q9H0E3 1048 aa10.21□□□□□ -0.77
CCL1-201ENST00000225842 DCCP43146 1447 aa10.21□□□□□ -0.78
CCL1-201ENST00000225842 RECKO95980 971 aa10.2□□□□□ -0.78
CCL1-201ENST00000225842 FSHRP23945 695 aa10.2□□□□□ -0.78
CCL1-201ENST00000225842 PTCH1Q13635 1447 aa10.2□□□□□ -0.78
CCL1-201ENST00000225842 KANK1Q14678 1352 aa10.2□□□□□ -0.78
CCL1-201ENST00000225842 PLA2G2CQ5R387 149 aa10.2□□□□□ -0.78
CCL1-201ENST00000225842 TMC7Q7Z402 723 aa10.2□□□□□ -0.78
CCL1-201ENST00000225842 ETNK1Q9HBU6 452 aa10.2□□□□□ -0.78
CCL1-201ENST00000225842 BCL9LQ86UU0 1499 aa10.19□□□□□ -0.78
CCL1-201ENST00000225842 MST1RQ04912 1400 aa10.19□□□□□ -0.78
CCL1-201ENST00000225842 PIK3R4Q99570 1358 aa10.19□□□□□ -0.78
CCL1-201ENST00000225842 PPP1R12BO60237 982 aaPredicted RBP10.19□□□□□ -0.78
CCL1-201ENST00000225842 INHAP05111 366 aa10.19□□□□□ -0.78
CCL1-201ENST00000225842 P4HBP07237 508 aaKnown RBP10.19□□□□□ -0.78
CCL1-201ENST00000225842 EPHA4P54764 986 aa10.19□□□□□ -0.78
CCL1-201ENST00000225842 TSNAXIP1Q2TAA8 658 aa10.19□□□□□ -0.78
CCL1-201ENST00000225842 ZNF784Q8NCA9 323 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms