RNA–Protein interactions for RNA: ENST00000223122.3

C1GALT1-201, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1GALT1, Length 6,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-201ENST00000223122 ZBTB9Q96C00 473 aa9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 ORC3Q9UBD5 711 aaPredicted RBP9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 DENND4BO75064 1496 aaPredicted RBP9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 COL17A1Q9UMD9 1497 aaPredicted RBP9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 F13A1P00488 732 aa9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 PIP4K2BP78356 416 aa9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 CAVIN4Q5BKX8 364 aa9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 PLEKHM2Q8IWE5 1019 aa9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 PHACTR3Q96KR7 559 aa9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 MKNK2Q9HBH9 465 aa9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 NEFHP12036 1026 aa9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 METAP2P50579 478 aaKnown RBP eCLIP9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 MTHFSDQ2M296 383 aaKnown RBP9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 ZSWIM4Q9H7M6 989 aa9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 SEC63Q9UGP8 760 aaKnown RBP9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 DMRT2Q9Y5R5 561 aa9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 TRAPPC8Q9Y2L5 1435 aa9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 KIF2AO00139 706 aaPredicted RBP9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 ATP8B2P98198 1209 aa9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 SLC39A6Q13433 755 aa9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 SPA17Q15506 151 aa9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 DNAJC25Q9H1X3 360 aa9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 BMP2KQ9NSY1 1161 aaPredicted RBP9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 POLKQ9UBT6 870 aa9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 PIK3C2GO75747 1445 aa9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 VAMP4O75379 141 aa9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 CLCN1P35523 988 aa9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 TAF4BQ92750 862 aa9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 TTC12Q9H892 705 aaPredicted RBP9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 ZBTB40Q9NUA8 1239 aa9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 CWC25Q9NXE8 425 aaPredicted RBP9.44□□□□□ -0.9
C1GALT1-201ENST00000223122 AK2P54819 239 aa9.43□□□□□ -0.9
C1GALT1-201ENST00000223122 NOLC1Q14978 699 aaKnown RBP eCLIP9.43□□□□□ -0.9
C1GALT1-201ENST00000223122 CHST3Q7LGC8 479 aa9.43□□□□□ -0.9
C1GALT1-201ENST00000223122 TXLNBQ8N3L3 684 aa9.43□□□□□ -0.9
C1GALT1-201ENST00000223122 UBA5Q9GZZ9 404 aa9.43□□□□□ -0.9
C1GALT1-201ENST00000223122 ADAMTS12P58397 1594 aa9.43□□□□□ -0.9
C1GALT1-201ENST00000223122 A0A1W2PP64 1363 aa9.43□□□□□ -0.9
C1GALT1-201ENST00000223122 MATR3P43243 847 aaKnown RBP eCLIP9.43□□□□□ -0.98e-10■□□□□ 11.2
C1GALT1-201ENST00000223122 KDM2BQ8NHM5 1336 aa9.43□□□□□ -0.9
C1GALT1-201ENST00000223122 MCM5P33992 734 aa9.43□□□□□ -0.9
C1GALT1-201ENST00000223122 DZIP1Q86YF9 867 aaKnown RBP9.43□□□□□ -0.9
C1GALT1-201ENST00000223122 OTUD7AQ8TE49 926 aaPredicted RBP9.43□□□□□ -0.9
C1GALT1-201ENST00000223122 ANKIB1Q9P2G1 1089 aa9.43□□□□□ -0.9
C1GALT1-201ENST00000223122 PPP1R1BQ9UD71 204 aaPredicted RBP9.43□□□□□ -0.9
C1GALT1-201ENST00000223122 PLCH2O75038 1416 aa9.43□□□□□ -0.9
C1GALT1-201ENST00000223122 KLF18A0A0U1RQI7 1052 aa9.43□□□□□ -0.9
C1GALT1-201ENST00000223122 IBSPP21815 317 aaPredicted RBP9.43□□□□□ -0.9
C1GALT1-201ENST00000223122 CHRNA2Q15822 529 aa9.43□□□□□ -0.9
C1GALT1-201ENST00000223122 KRT28Q7Z3Y7 464 aa9.43□□□□□ -0.9
C1GALT1-201ENST00000223122 SMC5Q8IY18 1101 aa9.43□□□□□ -0.9
C1GALT1-201ENST00000223122 CNKSR2Q8WXI2 1034 aa9.43□□□□□ -0.9
C1GALT1-201ENST00000223122 NCKAP5LQ9HCH0 1330 aa9.43□□□□□ -0.9
C1GALT1-201ENST00000223122 DYNC1I1O14576 645 aa9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 CPA1P15085 419 aa9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 CCDC178Q5BJE1 867 aa9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 FKBP15Q5T1M5 1219 aa9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 CCDC186Q7Z3E2 898 aa9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 AOPEPQ8N6M6 819 aa9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 HMG20BQ9P0W2 317 aa9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 ANKRD62A6NC57 917 aa9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 LIG1P18858 919 aa9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 GTF2F1P35269 517 aaKnown RBP eCLIP9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 IARSP41252 1262 aaKnown RBP9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 GSDMDP57764 484 aa9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 NCOA7Q8NI08 942 aa9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 CTCFLQ8NI51 663 aaPredicted RBP9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 CRACR2AQ9BSW2 395 aa9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 DACT1Q9NYF0 836 aa9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 DTNBO60941 627 aa9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 JAKMIP3Q5VZ66 844 aa9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 XAGE3Q8WTP9 111 aa9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 USP26Q9BXU7 913 aa9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 A2MP01023 1474 aa9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 CACNA2D4Q7Z3S7 1137 aa9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 V9GYY5 206 aaPredicted RBP9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 PER1O15534 1290 aaPredicted RBP9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 MARCKSP29966 332 aaPredicted RBP9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 SSR1P43307 286 aaKnown RBP9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 SEPT7Q16181 437 aaKnown RBP9.42□□□□□ -0.9
C1GALT1-201ENST00000223122 CCDC196A0A1B0GTZ2 297 aa9.41□□□□□ -0.9
C1GALT1-201ENST00000223122 CATIPQ7Z7H3 387 aa9.41□□□□□ -0.9
C1GALT1-201ENST00000223122 LRRC59Q96AG4 307 aaKnown RBP9.41□□□□□ -0.9
C1GALT1-201ENST00000223122 PBRM1Q86U86 1689 aa9.41□□□□□ -0.9
C1GALT1-201ENST00000223122 TSG101Q99816 390 aa9.41□□□□□ -0.9
C1GALT1-201ENST00000223122 ARHGEF12Q9NZN5 1544 aa9.41□□□□□ -0.9
C1GALT1-201ENST00000223122 NEMFO60524 1076 aa9.41□□□□□ -0.9
C1GALT1-201ENST00000223122 AFMP43652 599 aa9.41□□□□□ -0.9
C1GALT1-201ENST00000223122 DCTPP1Q9H773 170 aa9.41□□□□□ -0.9
C1GALT1-201ENST00000223122 VAT1LQ9HCJ6 419 aa9.41□□□□□ -0.9
C1GALT1-201ENST00000223122 BCCIPQ9P287 314 aaKnown RBP eCLIP9.41□□□□□ -0.9
C1GALT1-201ENST00000223122 KIF21AQ7Z4S6 1674 aa9.41□□□□□ -0.9
C1GALT1-201ENST00000223122 MAST1Q9Y2H9 1570 aa9.41□□□□□ -0.9
C1GALT1-201ENST00000223122 CWF19L2Q2TBE0 894 aaKnown RBP9.41□□□□□ -0.9
C1GALT1-201ENST00000223122 LDHAL6AQ6ZMR3 332 aa9.41□□□□□ -0.9
C1GALT1-201ENST00000223122 IQCA1Q86XH1 822 aa9.4□□□□□ -0.9
C1GALT1-201ENST00000223122 GOPCQ9HD26 462 aa9.4□□□□□ -0.9
C1GALT1-201ENST00000223122 RRAGDQ9NQL2 400 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms