RNA–Protein interactions for RNA: ENST00000221847.5

EBI3-201, Transcript of Epstein-Barr virus induced 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBI3, Length 1,186 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-201ENST00000221847 ADCY9O60503 1353 aa20.5■□□□□ 0.87
EBI3-201ENST00000221847 CACNA1FO60840 1977 aa20.5■□□□□ 0.87
EBI3-201ENST00000221847 TRIM28Q13263 835 aaKnown RBP20.49■□□□□ 0.87
EBI3-201ENST00000221847 FKBP5Q13451 457 aaPredicted RBP20.49■□□□□ 0.87
EBI3-201ENST00000221847 DALRD3Q5D0E6 543 aaKnown RBP20.49■□□□□ 0.87
EBI3-201ENST00000221847 SYNE4Q8N205 404 aa20.49■□□□□ 0.87
EBI3-201ENST00000221847 TRMT112Q9UI30 125 aaKnown RBP20.49■□□□□ 0.87
EBI3-201ENST00000221847 PDZRN3Q9UPQ7 1066 aa20.49■□□□□ 0.87
EBI3-201ENST00000221847 ZBED9Q6R2W3 1325 aa20.49■□□□□ 0.87
EBI3-201ENST00000221847 KLRG2A4D1S0 409 aaPredicted RBP20.48■□□□□ 0.87
EBI3-201ENST00000221847 SSH1Q8WYL5 1049 aa20.48■□□□□ 0.87
EBI3-201ENST00000221847 ZNF622Q969S3 477 aaKnown RBP eCLIP20.48■□□□□ 0.87
EBI3-201ENST00000221847 BRCA1P38398 1863 aaKnown RBP20.47■□□□□ 0.87
EBI3-201ENST00000221847 GRIN3BO60391 1043 aa20.47■□□□□ 0.87
EBI3-201ENST00000221847 SRGNP10124 158 aa20.47■□□□□ 0.87
EBI3-201ENST00000221847 MRPL50Q8N5N7 158 aaKnown RBP20.47■□□□□ 0.87
EBI3-201ENST00000221847 GOLGB1Q14789 3259 aaKnown RBP20.47■□□□□ 0.87
EBI3-201ENST00000221847 SLC10A5Q5PT55 438 aa20.46■□□□□ 0.87
EBI3-201ENST00000221847 TTLL6Q8N841 843 aa20.46■□□□□ 0.87
EBI3-201ENST00000221847 COL11A2P13942 1736 aaPredicted RBP20.46■□□□□ 0.87
EBI3-201ENST00000221847 SH3TC1Q8TE82 1336 aa20.46■□□□□ 0.87
EBI3-201ENST00000221847 DLEC1Q9Y238 1755 aa20.45■□□□□ 0.86
EBI3-201ENST00000221847 IGKV5-2P06315 115 aa20.45■□□□□ 0.86
EBI3-201ENST00000221847 CT47B1P0C2W7 299 aaPredicted RBP20.45■□□□□ 0.86
EBI3-201ENST00000221847 HCLS1P14317 486 aaPredicted RBP20.45■□□□□ 0.86
EBI3-201ENST00000221847 C3orf67Q6ZVT6 689 aa20.45■□□□□ 0.86
EBI3-201ENST00000221847 CCDC191Q8NCU4 936 aa20.45■□□□□ 0.86
EBI3-201ENST00000221847 DNAAF4Q8WXU2 420 aa20.45■□□□□ 0.86
EBI3-201ENST00000221847 FAM89AQ96GI7 184 aa20.45■□□□□ 0.86
EBI3-201ENST00000221847 MASTLQ96GX5 879 aa20.45■□□□□ 0.86
EBI3-201ENST00000221847 BCL2L13Q9BXK5 485 aa20.45■□□□□ 0.86
EBI3-201ENST00000221847 RNF123Q5XPI4 1314 aa20.45■□□□□ 0.86
EBI3-201ENST00000221847 TNRC6CQ9HCJ0 1690 aaKnown RBP20.45■□□□□ 0.86
EBI3-201ENST00000221847 F6X3S4 739 aa20.44■□□□□ 0.86
EBI3-201ENST00000221847 NEXNQ0ZGT2 675 aa20.44■□□□□ 0.86
EBI3-201ENST00000221847 ALDH1L2Q3SY69 923 aa20.44■□□□□ 0.86
EBI3-201ENST00000221847 RTL5Q5HYW3 569 aaPredicted RBP20.44■□□□□ 0.86
EBI3-201ENST00000221847 STYK1Q6J9G0 422 aa20.44■□□□□ 0.86
EBI3-201ENST00000221847 CWC25Q9NXE8 425 aaPredicted RBP20.44■□□□□ 0.86
EBI3-201ENST00000221847 RIC1Q4ADV7 1423 aa20.44■□□□□ 0.86
EBI3-201ENST00000221847 NPR1P16066 1061 aa20.43■□□□□ 0.86
EBI3-201ENST00000221847 NLRP3Q96P20 1036 aa20.43■□□□□ 0.86
EBI3-201ENST00000221847 CWF19L2Q2TBE0 894 aaKnown RBP20.42■□□□□ 0.86
EBI3-201ENST00000221847 CRY2Q49AN0 593 aa20.42■□□□□ 0.86
EBI3-201ENST00000221847 JARID2Q92833 1246 aaPredicted RBP20.42■□□□□ 0.86
EBI3-201ENST00000221847 CNKSR1Q969H4 720 aa20.42■□□□□ 0.86
EBI3-201ENST00000221847 SMC4Q9NTJ3 1288 aa20.42■□□□□ 0.86
EBI3-201ENST00000221847 NEURL1BA8MQ27 555 aa20.41■□□□□ 0.86
EBI3-201ENST00000221847 ARHGAP27Q6ZUM4 889 aa20.41■□□□□ 0.86
EBI3-201ENST00000221847 ZBTB38Q8NAP3 1195 aaPredicted RBP20.41■□□□□ 0.86
EBI3-201ENST00000221847 IRS4O14654 1257 aaPredicted RBP20.4■□□□□ 0.86
EBI3-201ENST00000221847 PCCAP05165 728 aaPredicted RBP20.4■□□□□ 0.86
EBI3-201ENST00000221847 RARSP54136 660 aaKnown RBP20.4■□□□□ 0.86
EBI3-201ENST00000221847 RPGRQ92834 1020 aaKnown RBP20.4■□□□□ 0.86
EBI3-201ENST00000221847 ZNF219Q9P2Y4 722 aaPredicted RBP20.4■□□□□ 0.86
EBI3-201ENST00000221847 ARFGEF1Q9Y6D6 1849 aa20.39■□□□□ 0.86
EBI3-201ENST00000221847 HOXA10P31260 410 aaPredicted RBP20.39■□□□□ 0.85
EBI3-201ENST00000221847 PRPF40BQ6NWY9 871 aaKnown RBP20.39■□□□□ 0.85
EBI3-201ENST00000221847 LINS1Q8NG48 757 aa20.39■□□□□ 0.85
EBI3-201ENST00000221847 BEND3Q5T5X7 828 aa20.38■□□□□ 0.85
EBI3-201ENST00000221847 SLX4Q8IY92 1834 aa20.38■□□□□ 0.85
EBI3-201ENST00000221847 PTPRCP08575 1304 aa20.37■□□□□ 0.85
EBI3-201ENST00000221847 C21orf2O43822 256 aa20.37■□□□□ 0.85
EBI3-201ENST00000221847 ALDH1B1P30837 517 aa20.37■□□□□ 0.85
EBI3-201ENST00000221847 GCKRQ14397 625 aa20.37■□□□□ 0.85
EBI3-201ENST00000221847 SLC4A10Q6U841 1118 aa20.37■□□□□ 0.85
EBI3-201ENST00000221847 RBM17Q96I25 401 aaKnown RBP20.37■□□□□ 0.85
EBI3-201ENST00000221847 UTRNP46939 3433 aa20.37■□□□□ 0.85
EBI3-201ENST00000221847 DDX60Q8IY21 1712 aaKnown RBP20.36■□□□□ 0.85
EBI3-201ENST00000221847 CRAMP1Q96RY5 1269 aa20.36■□□□□ 0.85
EBI3-201ENST00000221847 LAMB2P55268 1798 aa20.36■□□□□ 0.85
EBI3-201ENST00000221847 CACNA1SQ13698 1873 aa20.35■□□□□ 0.85
EBI3-201ENST00000221847 H7C1W4 665 aa20.35■□□□□ 0.85
EBI3-201ENST00000221847 BRPF1P55201 1214 aaPredicted RBP20.35■□□□□ 0.85
EBI3-201ENST00000221847 NOB1Q9ULX3 412 aaKnown RBP20.35■□□□□ 0.85
EBI3-201ENST00000221847 CHD4Q14839 1912 aa20.34■□□□□ 0.85
EBI3-201ENST00000221847 SF3B3Q15393 1217 aaKnown RBP20.34■□□□□ 0.85
EBI3-201ENST00000221847 UBE3BQ7Z3V4 1068 aa20.34■□□□□ 0.85
EBI3-201ENST00000221847 C7orf43Q8WVR3 580 aa20.34■□□□□ 0.85
EBI3-201ENST00000221847 CDHR2Q9BYE9 1310 aa20.33■□□□□ 0.85
EBI3-201ENST00000221847 PDE8AO60658 829 aa20.33■□□□□ 0.85
EBI3-201ENST00000221847 BCAR3O75815 825 aa20.33■□□□□ 0.85
EBI3-201ENST00000221847 HSP90B1P14625 803 aaKnown RBP20.33■□□□□ 0.85
EBI3-201ENST00000221847 YY1P25490 414 aa20.33■□□□□ 0.85
EBI3-201ENST00000221847 OLFM4Q6UX06 510 aa20.33■□□□□ 0.85
EBI3-201ENST00000221847 DDX46Q7L014 1031 aaKnown RBP20.33■□□□□ 0.85
EBI3-201ENST00000221847 SRCIN1Q9C0H9 1055 aa20.33■□□□□ 0.85
EBI3-201ENST00000221847 ABCC4O15439 1325 aa20.32■□□□□ 0.84
EBI3-201ENST00000221847 ALDH1L1O75891 902 aa20.32■□□□□ 0.84
EBI3-201ENST00000221847 CASP7P55210 303 aa20.32■□□□□ 0.84
EBI3-201ENST00000221847 RASSF7Q02833 373 aa20.31■□□□□ 0.84
EBI3-201ENST00000221847 NFKBIEO00221 500 aa20.3■□□□□ 0.84
EBI3-201ENST00000221847 PPEF1O14829 653 aaPredicted RBP20.3■□□□□ 0.84
EBI3-201ENST00000221847 SOGA3Q5TF21 947 aa20.3■□□□□ 0.84
EBI3-201ENST00000221847 SLC51AQ86UW1 340 aa20.3■□□□□ 0.84
EBI3-201ENST00000221847 CCDC85AQ96PX6 553 aaPredicted RBP20.3■□□□□ 0.84
EBI3-201ENST00000221847 GRAPQ13588 217 aa20.29■□□□□ 0.84
EBI3-201ENST00000221847 CCDC93Q567U6 631 aa20.29■□□□□ 0.84
EBI3-201ENST00000221847 GRAPLQ8TC17 118 aaPredicted RBP20.29■□□□□ 0.84
EBI3-201ENST00000221847 YTHDC1Q96MU7 727 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms