RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 LUZP1Q86V48 1076 aa13.27□□□□□ -0.28
NEFM-201ENST00000221166 EAF2Q96CJ1 260 aaPredicted RBP13.27□□□□□ -0.28
NEFM-201ENST00000221166 NLRP2Q9NX02 1062 aa13.27□□□□□ -0.28
NEFM-201ENST00000221166 GRM8O00222 908 aa13.27□□□□□ -0.29
NEFM-201ENST00000221166 HIP1O00291 1037 aa13.27□□□□□ -0.29
NEFM-201ENST00000221166 HMGN5P82970 282 aaKnown RBP13.27□□□□□ -0.29
NEFM-201ENST00000221166 IP6K1Q92551 441 aa13.27□□□□□ -0.29
NEFM-201ENST00000221166 MYD88Q99836 296 aa13.27□□□□□ -0.29
NEFM-201ENST00000221166 TLR7Q9NYK1 1049 aaKnown RBP13.27□□□□□ -0.29
NEFM-201ENST00000221166 ZC3H6P61129 1189 aaKnown RBP13.27□□□□□ -0.29
NEFM-201ENST00000221166 KDRP35968 1356 aa13.27□□□□□ -0.29
NEFM-201ENST00000221166 LIG1P18858 919 aa13.26□□□□□ -0.29
NEFM-201ENST00000221166 PIBF1Q8WXW3 757 aa13.26□□□□□ -0.29
NEFM-201ENST00000221166 SLC27A2O14975 620 aa13.26□□□□□ -0.29
NEFM-201ENST00000221166 AKAP4Q5JQC9 854 aa13.26□□□□□ -0.29
NEFM-201ENST00000221166 BABAM1Q9NWV8 329 aa13.26□□□□□ -0.29
NEFM-201ENST00000221166 KIF3AQ9Y496 699 aa13.26□□□□□ -0.29
NEFM-201ENST00000221166 ADAMTS13Q76LX8 1427 aa13.26□□□□□ -0.29
NEFM-201ENST00000221166 LARP1Q6PKG0 1096 aaKnown RBP13.26□□□□□ -0.29
NEFM-201ENST00000221166 ZSWIM6Q9HCJ5 1215 aa13.26□□□□□ -0.29
NEFM-201ENST00000221166 A0A0D9SFI3 127 aa13.25□□□□□ -0.29
NEFM-201ENST00000221166 TTC6Q86TZ1 520 aa13.25□□□□□ -0.29
NEFM-201ENST00000221166 GOLGA6L19H0YKK7 550 aa13.25□□□□□ -0.29
NEFM-201ENST00000221166 RNMTO43148 476 aaKnown RBP13.25□□□□□ -0.29
NEFM-201ENST00000221166 ZNF330Q9Y3S2 320 aaPredicted RBP13.25□□□□□ -0.29
NEFM-201ENST00000221166 PTGS1P23219 599 aa13.25□□□□□ -0.29
NEFM-201ENST00000221166 CBX1P83916 185 aa13.25□□□□□ -0.29
NEFM-201ENST00000221166 ANKRD1Q15327 319 aa13.25□□□□□ -0.29
NEFM-201ENST00000221166 ZRSR1Q15695 479 aaKnown RBP13.25□□□□□ -0.29
NEFM-201ENST00000221166 ANO6Q4KMQ2 910 aa13.25□□□□□ -0.29
NEFM-201ENST00000221166 MTERF4Q7Z6M4 381 aaKnown RBP13.25□□□□□ -0.29
NEFM-201ENST00000221166 SETD1BQ9UPS6 1966 aaKnown RBP13.25□□□□□ -0.29
NEFM-201ENST00000221166 PLEKHG1Q9ULL1 1385 aa13.24□□□□□ -0.29
NEFM-201ENST00000221166 ALDH1L1O75891 902 aa13.24□□□□□ -0.29
NEFM-201ENST00000221166 TYRO3Q06418 890 aa13.24□□□□□ -0.29
NEFM-201ENST00000221166 ATP5J2-PTCD1G3V325 749 aa13.24□□□□□ -0.29
NEFM-201ENST00000221166 PTCD1O75127 700 aaKnown RBP13.24□□□□□ -0.29
NEFM-201ENST00000221166 CCDC186Q7Z3E2 898 aa13.24□□□□□ -0.29
NEFM-201ENST00000221166 TECPR2O15040 1411 aa13.24□□□□□ -0.29
NEFM-201ENST00000221166 BECN2A8MW95 431 aa13.24□□□□□ -0.29
NEFM-201ENST00000221166 EPB41L2O43491 1005 aaKnown RBP13.24□□□□□ -0.29
NEFM-201ENST00000221166 CCDC129Q6ZRS4 1044 aa13.24□□□□□ -0.29
NEFM-201ENST00000221166 LINS1Q8NG48 757 aa13.24□□□□□ -0.29
NEFM-201ENST00000221166 RAPGEF4Q8WZA2 1011 aa13.24□□□□□ -0.29
NEFM-201ENST00000221166 PYCARDQ9ULZ3 195 aa13.24□□□□□ -0.29
NEFM-201ENST00000221166 GUCY1B3Q02153 619 aa13.23□□□□□ -0.29
NEFM-201ENST00000221166 ANKRD24Q8TF21 1146 aa13.23□□□□□ -0.29
NEFM-201ENST00000221166 SPATA31D1Q6ZQQ2 1576 aa13.23□□□□□ -0.29
NEFM-201ENST00000221166 JAK2O60674 1132 aa13.23□□□□□ -0.29
NEFM-201ENST00000221166 MYRIPQ8NFW9 859 aa13.23□□□□□ -0.29
NEFM-201ENST00000221166 XAGE3Q8WTP9 111 aa13.23□□□□□ -0.29
NEFM-201ENST00000221166 SCAND2PQ9GZW5 306 aaPredicted RBP13.23□□□□□ -0.29
NEFM-201ENST00000221166 PTPRUQ92729 1446 aa13.23□□□□□ -0.29
NEFM-201ENST00000221166 GIGYF1O75420 1035 aaPredicted RBP13.23□□□□□ -0.29
NEFM-201ENST00000221166 COPS6Q7L5N1 327 aa13.23□□□□□ -0.29
NEFM-201ENST00000221166 TMEM87AQ8NBN3 555 aa13.23□□□□□ -0.29
NEFM-201ENST00000221166 FAM200AQ8TCP9 573 aa13.23□□□□□ -0.29
NEFM-201ENST00000221166 RIMS1Q86UR5 1692 aaKnown RBP13.23□□□□□ -0.29
NEFM-201ENST00000221166 SASH1O94885 1247 aa13.23□□□□□ -0.29
NEFM-201ENST00000221166 AMOTQ4VCS5 1084 aa13.23□□□□□ -0.29
NEFM-201ENST00000221166 DDX46Q7L014 1031 aaKnown RBP13.23□□□□□ -0.29
NEFM-201ENST00000221166 TTC5Q8N0Z6 440 aa13.23□□□□□ -0.29
NEFM-201ENST00000221166 KCNH5Q8NCM2 988 aa13.23□□□□□ -0.29
NEFM-201ENST00000221166 C16orf45Q96MC5 204 aaPredicted RBP13.23□□□□□ -0.29
NEFM-201ENST00000221166 CCT2P78371 535 aaKnown RBP13.22□□□□□ -0.29
NEFM-201ENST00000221166 NECTIN1Q15223 517 aa13.22□□□□□ -0.29
NEFM-201ENST00000221166 DNAJC25Q9H1X3 360 aa13.22□□□□□ -0.29
NEFM-201ENST00000221166 PRIMPOLQ96LW4 560 aa13.22□□□□□ -0.29
NEFM-201ENST00000221166 TAF6LQ9Y6J9 622 aa13.22□□□□□ -0.29
NEFM-201ENST00000221166 COL9A3Q14050 684 aaPredicted RBP13.22□□□□□ -0.29
NEFM-201ENST00000221166 UBE3BQ7Z3V4 1068 aa13.22□□□□□ -0.29
NEFM-201ENST00000221166 BRF1Q92994 677 aa13.22□□□□□ -0.29
NEFM-201ENST00000221166 TM6SF1Q9BZW5 370 aa13.22□□□□□ -0.29
NEFM-201ENST00000221166 SPDYE4A6NLX3 237 aa13.21□□□□□ -0.29
NEFM-201ENST00000221166 TPM3P06753 285 aa13.21□□□□□ -0.29
NEFM-201ENST00000221166 ZNF165P49910 485 aa13.21□□□□□ -0.29
NEFM-201ENST00000221166 TPD52L1Q16890 204 aaPredicted RBP13.21□□□□□ -0.29
NEFM-201ENST00000221166 ZNF589Q86UQ0 364 aaPredicted RBP13.21□□□□□ -0.29
NEFM-201ENST00000221166 ITSN1Q15811 1721 aa13.21□□□□□ -0.29
NEFM-201ENST00000221166 HOXB7P09629 217 aa13.21□□□□□ -0.29
NEFM-201ENST00000221166 RPS6KB1P23443 525 aa13.21□□□□□ -0.29
NEFM-201ENST00000221166 Q6ZUG5 572 aa13.21□□□□□ -0.29
NEFM-201ENST00000221166 NEK1Q96PY6 1258 aa13.21□□□□□ -0.29
NEFM-201ENST00000221166 SEC62Q99442 399 aaKnown RBP13.21□□□□□ -0.29
NEFM-201ENST00000221166 ADCY9O60503 1353 aa13.21□□□□□ -0.29
NEFM-201ENST00000221166 RIMBP3CA6NJZ7 1639 aa13.21□□□□□ -0.3
NEFM-201ENST00000221166 RIMBP3BA6NNM3 1639 aa13.21□□□□□ -0.3
NEFM-201ENST00000221166 RIMBP3Q9UFD9 1639 aa13.21□□□□□ -0.3
NEFM-201ENST00000221166 PPP4R3BQ5MIZ7 849 aa13.21□□□□□ -0.3
NEFM-201ENST00000221166 MAP4K1Q92918 833 aa13.21□□□□□ -0.3
NEFM-201ENST00000221166 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.21□□□□□ -0.3
NEFM-201ENST00000221166 GCP02774 474 aa13.2□□□□□ -0.3
NEFM-201ENST00000221166 LRMPQ12912 555 aa13.2□□□□□ -0.3
NEFM-201ENST00000221166 SF3A1Q15459 793 aaKnown RBP13.2□□□□□ -0.3
NEFM-201ENST00000221166 FILIP1Q7Z7B0 1213 aa13.2□□□□□ -0.3
NEFM-201ENST00000221166 TFCP2Q12800 502 aa13.2□□□□□ -0.3
NEFM-201ENST00000221166 GORABQ5T7V8 394 aa13.2□□□□□ -0.3
NEFM-201ENST00000221166 CBX8Q9HC52 389 aa13.2□□□□□ -0.3
NEFM-201ENST00000221166 AP5Z1O43299 807 aa13.19□□□□□ -0.3
NEFM-201ENST00000221166 CHGBP05060 677 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms