RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 ORC3Q9UBD5 711 aaPredicted RBP20.58■□□□□ 0.88
EXTL3-201ENST00000220562 TSPY2A6NKD2 308 aa20.58■□□□□ 0.88
EXTL3-201ENST00000220562 GCOM1H8Y6P7 765 aaPredicted RBP20.58■□□□□ 0.88
EXTL3-201ENST00000220562 MYZAPP0CAP1 466 aa20.58■□□□□ 0.88
EXTL3-201ENST00000220562 CUL7Q14999 1698 aa20.57■□□□□ 0.88
EXTL3-201ENST00000220562 PLB1Q6P1J6 1458 aa20.57■□□□□ 0.88
EXTL3-201ENST00000220562 HMGXB3Q12766 1538 aa20.57■□□□□ 0.88
EXTL3-201ENST00000220562 PI4KAP2A4QPH2 592 aa20.57■□□□□ 0.88
EXTL3-201ENST00000220562 C6orf229H3BNL8 230 aa20.57■□□□□ 0.88
EXTL3-201ENST00000220562 PDE4BQ07343 736 aa20.57■□□□□ 0.88
EXTL3-201ENST00000220562 PI4KAP1Q8N8J0 262 aa20.57■□□□□ 0.88
EXTL3-201ENST00000220562 WDR78Q5VTH9 848 aa20.57■□□□□ 0.88
EXTL3-201ENST00000220562 UBE3BQ7Z3V4 1068 aa20.57■□□□□ 0.88
EXTL3-201ENST00000220562 TMCO5BA8MYB1 307 aa20.56■□□□□ 0.88
EXTL3-201ENST00000220562 TCERG1LQ5VWI1 586 aa20.56■□□□□ 0.88
EXTL3-201ENST00000220562 TRMT1LQ7Z2T5 733 aaKnown RBP20.56■□□□□ 0.88
EXTL3-201ENST00000220562 EXOC5O00471 708 aa20.56■□□□□ 0.88
EXTL3-201ENST00000220562 KRT28Q7Z3Y7 464 aa20.56■□□□□ 0.88
EXTL3-201ENST00000220562 HMG20BQ9P0W2 317 aa20.56■□□□□ 0.88
EXTL3-201ENST00000220562 IFNL2Q8IZJ0 200 aa20.56■□□□□ 0.88
EXTL3-201ENST00000220562 TTLL12Q14166 644 aaPredicted RBP20.56■□□□□ 0.88
EXTL3-201ENST00000220562 FAM114A1Q8IWE2 563 aa20.56■□□□□ 0.88
EXTL3-201ENST00000220562 CDC5LQ99459 802 aaKnown RBP20.56■□□□□ 0.88
EXTL3-201ENST00000220562 IDEP14735 1019 aa20.55■□□□□ 0.88
EXTL3-201ENST00000220562 UBE2HP62256 183 aa20.55■□□□□ 0.88
EXTL3-201ENST00000220562 SNW1Q13573 536 aaKnown RBP20.55■□□□□ 0.88
EXTL3-201ENST00000220562 FERMT2Q96AC1 680 aa20.55■□□□□ 0.88
EXTL3-201ENST00000220562 ZSCAN23Q3MJ62 389 aa20.55■□□□□ 0.88
EXTL3-201ENST00000220562 CTNNA2P26232 953 aa20.54■□□□□ 0.88
EXTL3-201ENST00000220562 UBE4AQ14139 1066 aa20.54■□□□□ 0.88
EXTL3-201ENST00000220562 NUCB1Q02818 461 aa20.54■□□□□ 0.88
EXTL3-201ENST00000220562 RNF187Q5TA31 235 aaPredicted RBP20.54■□□□□ 0.88
EXTL3-201ENST00000220562 POTEB2H3BUK9 544 aa20.54■□□□□ 0.88
EXTL3-201ENST00000220562 KANK3Q6NY19 840 aa20.54■□□□□ 0.88
EXTL3-201ENST00000220562 HLTFQ14527 1009 aaKnown RBP eCLIP20.53■□□□□ 0.88
EXTL3-201ENST00000220562 PRPF4BQ13523 1007 aaKnown RBP20.53■□□□□ 0.88
EXTL3-201ENST00000220562 ANKRD24Q8TF21 1146 aa20.53■□□□□ 0.88
EXTL3-201ENST00000220562 TEX13AQ9BXU3 409 aaPredicted RBP20.53■□□□□ 0.88
EXTL3-201ENST00000220562 CETN1Q12798 172 aa20.53■□□□□ 0.88
EXTL3-201ENST00000220562 TBC1D32Q96NH3 1257 aa20.53■□□□□ 0.88
EXTL3-201ENST00000220562 BAG3O95817 575 aa20.53■□□□□ 0.88
EXTL3-201ENST00000220562 DDX46Q7L014 1031 aaKnown RBP20.53■□□□□ 0.88
EXTL3-201ENST00000220562 HOOK3Q86VS8 718 aa20.53■□□□□ 0.88
EXTL3-201ENST00000220562 NECAB1Q8N987 351 aa20.53■□□□□ 0.88
EXTL3-201ENST00000220562 SYCP3Q8IZU3 236 aa20.53■□□□□ 0.88
EXTL3-201ENST00000220562 PYM1Q9BRP8 204 aaKnown RBP20.53■□□□□ 0.88
EXTL3-201ENST00000220562 NAA15Q9BXJ9 866 aaKnown RBP20.53■□□□□ 0.88
EXTL3-201ENST00000220562 DHX29Q7Z478 1369 aaKnown RBP20.53■□□□□ 0.88
EXTL3-201ENST00000220562 ZNF165P49910 485 aa20.52■□□□□ 0.88
EXTL3-201ENST00000220562 CCDC102BQ68D86 513 aa20.52■□□□□ 0.88
EXTL3-201ENST00000220562 PRC1O43663 620 aa20.52■□□□□ 0.88
EXTL3-201ENST00000220562 ANXA1P04083 346 aa20.52■□□□□ 0.88
EXTL3-201ENST00000220562 NOP2P46087 812 aaKnown RBP20.52■□□□□ 0.88
EXTL3-201ENST00000220562 MAPK8IP2Q13387 824 aaPredicted RBP20.52■□□□□ 0.88
EXTL3-201ENST00000220562 CEP135Q66GS9 1140 aa20.52■□□□□ 0.88
EXTL3-201ENST00000220562 IDI1Q13907 227 aa20.52■□□□□ 0.87
EXTL3-201ENST00000220562 GIMAP6Q6P9H5 292 aa20.52■□□□□ 0.87
EXTL3-201ENST00000220562 ZSCAN22P10073 491 aaPredicted RBP20.51■□□□□ 0.87
EXTL3-201ENST00000220562 CTR9Q6PD62 1173 aa20.51■□□□□ 0.87
EXTL3-201ENST00000220562 TAOK3Q9H2K8 898 aa20.51■□□□□ 0.87
EXTL3-201ENST00000220562 MMRN2Q9H8L6 949 aa20.51■□□□□ 0.87
EXTL3-201ENST00000220562 ANKRD36BQ8N2N9 1353 aa20.51■□□□□ 0.87
EXTL3-201ENST00000220562 IL16Q14005 1332 aa20.51■□□□□ 0.87
EXTL3-201ENST00000220562 MCM5P33992 734 aa20.51■□□□□ 0.87
EXTL3-201ENST00000220562 UBA7P41226 1012 aa20.51■□□□□ 0.87
EXTL3-201ENST00000220562 SMC1AQ14683 1233 aaKnown RBP20.51■□□□□ 0.87
EXTL3-201ENST00000220562 TMX3Q96JJ7 454 aa20.51■□□□□ 0.87
EXTL3-201ENST00000220562 LDHCP07864 332 aa20.51■□□□□ 0.87
EXTL3-201ENST00000220562 FEZ1Q99689 392 aa20.51■□□□□ 0.87
EXTL3-201ENST00000220562 EXOC1Q9NV70 894 aa20.51■□□□□ 0.87
EXTL3-201ENST00000220562 SAMM50Q9Y512 469 aa20.51■□□□□ 0.87
EXTL3-201ENST00000220562 MYCNP04198 464 aaPredicted RBP20.51■□□□□ 0.87
EXTL3-201ENST00000220562 RHPN1Q8TCX5 695 aa20.51■□□□□ 0.87
EXTL3-201ENST00000220562 ZSCAN16Q9H4T2 348 aaPredicted RBP20.51■□□□□ 0.87
EXTL3-201ENST00000220562 SNRPA1P09661 255 aaKnown RBP20.5■□□□□ 0.87
EXTL3-201ENST00000220562 UVSSAQ2YD98 709 aa20.5■□□□□ 0.87
EXTL3-201ENST00000220562 ACEP12821 1306 aa20.5■□□□□ 0.87
EXTL3-201ENST00000220562 KLF18A0A0U1RQI7 1052 aa20.5■□□□□ 0.87
EXTL3-201ENST00000220562 GIMAP7Q8NHV1 300 aa20.5■□□□□ 0.87
EXTL3-201ENST00000220562 JADE2Q9NQC1 790 aa20.5■□□□□ 0.87
EXTL3-201ENST00000220562 CHPF2Q9P2E5 772 aa20.5■□□□□ 0.87
EXTL3-201ENST00000220562 CEBPAP49715 358 aaPredicted RBP20.5■□□□□ 0.87
EXTL3-201ENST00000220562 SDSP20132 328 aa20.5■□□□□ 0.87
EXTL3-201ENST00000220562 SPECC1Q5M775 1068 aa20.5■□□□□ 0.87
EXTL3-201ENST00000220562 STXBP4Q6ZWJ1 553 aa20.5■□□□□ 0.87
EXTL3-201ENST00000220562 CRNKL1Q9BZJ0 848 aaKnown RBP20.5■□□□□ 0.87
EXTL3-201ENST00000220562 CNPY2Q9Y2B0 182 aa20.49■□□□□ 0.87
EXTL3-201ENST00000220562 GOLGA6L9A6NEM1 432 aa20.49■□□□□ 0.87
EXTL3-201ENST00000220562 HLA-DOAP06340 250 aa20.49■□□□□ 0.87
EXTL3-201ENST00000220562 WTAPQ15007 396 aa20.49■□□□□ 0.87
EXTL3-201ENST00000220562 LRRC2Q9BYS8 371 aa20.49■□□□□ 0.87
EXTL3-201ENST00000220562 MICALCLQ6ZW33 695 aa20.49■□□□□ 0.87
EXTL3-201ENST00000220562 TRIM47Q96LD4 638 aa20.49■□□□□ 0.87
EXTL3-201ENST00000220562 CABP5Q9NP86 173 aa20.49■□□□□ 0.87
EXTL3-201ENST00000220562 UQCRFS1P1P0C7P4 283 aa20.49■□□□□ 0.87
EXTL3-201ENST00000220562 PPP4R3BQ5MIZ7 849 aa20.49■□□□□ 0.87
EXTL3-201ENST00000220562 MAATS1Q7Z4T9 603 aa20.49■□□□□ 0.87
EXTL3-201ENST00000220562 ABCA10Q8WWZ4 1543 aa20.49■□□□□ 0.87
EXTL3-201ENST00000220562 SYKP43405 635 aa20.48■□□□□ 0.87
EXTL3-201ENST00000220562 BRF1Q92994 677 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms