RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 NEURL4Q96JN8 1562 aa12.48□□□□□ -0.41
VPS18-201ENST00000220509 AATKQ6ZMQ8 1374 aa12.48□□□□□ -0.41
VPS18-201ENST00000220509 TTC36A6NLP5 189 aa12.48□□□□□ -0.41
VPS18-201ENST00000220509 KDM4AO75164 1064 aa12.48□□□□□ -0.41
VPS18-201ENST00000220509 MCM2P49736 904 aa12.48□□□□□ -0.41
VPS18-201ENST00000220509 LMBRD1Q9NUN5 540 aa12.48□□□□□ -0.41
VPS18-201ENST00000220509 SLAIN2Q9P270 581 aa12.48□□□□□ -0.41
VPS18-201ENST00000220509 NSFL1CQ9UNZ2 370 aaKnown RBP12.48□□□□□ -0.41
VPS18-201ENST00000220509 RIMS1Q86UR5 1692 aaKnown RBP12.48□□□□□ -0.41
VPS18-201ENST00000220509 ATP5J2-PTCD1G3V325 749 aa12.47□□□□□ -0.41
VPS18-201ENST00000220509 STK3Q13188 491 aa12.47□□□□□ -0.41
VPS18-201ENST00000220509 CT47A1Q5JQC4 288 aaPredicted RBP12.47□□□□□ -0.41
VPS18-201ENST00000220509 MYO3AQ8NEV4 1616 aa12.47□□□□□ -0.41
VPS18-201ENST00000220509 PDE1AP54750 535 aa12.47□□□□□ -0.41
VPS18-201ENST00000220509 JAKMIP1Q96N16 626 aaKnown RBP12.47□□□□□ -0.41
VPS18-201ENST00000220509 MRVI1Q9Y6F6 885 aa12.47□□□□□ -0.41
VPS18-201ENST00000220509 IFT172Q9UG01 1749 aa12.47□□□□□ -0.41
VPS18-201ENST00000220509 ERICH4A6NGS2 130 aa12.46□□□□□ -0.41
VPS18-201ENST00000220509 HCLS1P14317 486 aaPredicted RBP12.46□□□□□ -0.41
VPS18-201ENST00000220509 LRSAM1Q6UWE0 723 aa12.46□□□□□ -0.41
VPS18-201ENST00000220509 PLEKHM2Q8IWE5 1019 aa12.46□□□□□ -0.41
VPS18-201ENST00000220509 PIK3R4Q99570 1358 aa12.46□□□□□ -0.41
VPS18-201ENST00000220509 LARP1Q6PKG0 1096 aaKnown RBP12.46□□□□□ -0.41
VPS18-201ENST00000220509 GPT2Q8TD30 523 aa12.46□□□□□ -0.41
VPS18-201ENST00000220509 PHF23Q9BUL5 403 aaPredicted RBP12.46□□□□□ -0.41
VPS18-201ENST00000220509 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.46□□□□□ -0.41
VPS18-201ENST00000220509 GLRX3O76003 335 aaKnown RBP12.46□□□□□ -0.42
VPS18-201ENST00000220509 BICD2Q8TD16 824 aa12.46□□□□□ -0.42
VPS18-201ENST00000220509 PNPLA6Q8IY17 1366 aa12.45□□□□□ -0.42
VPS18-201ENST00000220509 TERF1P54274 439 aa12.45□□□□□ -0.42
VPS18-201ENST00000220509 NBPF11Q86T75 865 aa12.45□□□□□ -0.42
VPS18-201ENST00000220509 MBD3O95983 291 aa12.45□□□□□ -0.42
VPS18-201ENST00000220509 CYP46A1Q9Y6A2 500 aa12.45□□□□□ -0.42
VPS18-201ENST00000220509 CPLX1O14810 134 aa12.45□□□□□ -0.42
VPS18-201ENST00000220509 RAB11FIP3O75154 756 aa12.45□□□□□ -0.42
VPS18-201ENST00000220509 CCDC172P0C7W6 258 aa12.45□□□□□ -0.42
VPS18-201ENST00000220509 LRRFIP1Q32MZ4 808 aaKnown RBP12.45□□□□□ -0.42
VPS18-201ENST00000220509 RHPN1Q8TCX5 695 aa12.45□□□□□ -0.42
VPS18-201ENST00000220509 ADCY5O95622 1261 aa12.44□□□□□ -0.42
VPS18-201ENST00000220509 U2AF2P26368 475 aaKnown RBP eCLIP12.44□□□□□ -0.42
VPS18-201ENST00000220509 HMGN5P82970 282 aaKnown RBP12.44□□□□□ -0.42
VPS18-201ENST00000220509 NOLC1Q14978 699 aaKnown RBP eCLIP12.44□□□□□ -0.42
VPS18-201ENST00000220509 FER1L4A9Z1Z3 1794 aa12.44□□□□□ -0.42
VPS18-201ENST00000220509 PSMA5P28066 241 aa12.44□□□□□ -0.42
VPS18-201ENST00000220509 POLD1P28340 1107 aa12.44□□□□□ -0.42
VPS18-201ENST00000220509 A0A087WZG4 1122 aa12.44□□□□□ -0.42
VPS18-201ENST00000220509 CASTP20810 708 aaKnown RBP12.44□□□□□ -0.42
VPS18-201ENST00000220509 FKBP4Q02790 459 aaKnown RBP eCLIP12.44□□□□□ -0.42
VPS18-201ENST00000220509 CWF19L2Q2TBE0 894 aaKnown RBP12.44□□□□□ -0.42
VPS18-201ENST00000220509 PRPF40BQ6NWY9 871 aaKnown RBP12.44□□□□□ -0.42
VPS18-201ENST00000220509 UBE3BQ7Z3V4 1068 aa12.44□□□□□ -0.42
VPS18-201ENST00000220509 ARHGEF25Q86VW2 580 aa12.44□□□□□ -0.42
VPS18-201ENST00000220509 ZBTB3Q9H5J0 574 aa12.44□□□□□ -0.42
VPS18-201ENST00000220509 HYPKQ9NX55 129 aa12.44□□□□□ -0.42
VPS18-201ENST00000220509 KIF6Q6ZMV9 814 aa12.43□□□□□ -0.42
VPS18-201ENST00000220509 MAP3K5Q99683 1374 aa12.43□□□□□ -0.42
VPS18-201ENST00000220509 MAP2P11137 1827 aaKnown RBP12.43□□□□□ -0.42
VPS18-201ENST00000220509 ZNF445P59923 1031 aa12.43□□□□□ -0.42
VPS18-201ENST00000220509 PA2G4Q9UQ80 394 aaKnown RBP12.43□□□□□ -0.42
VPS18-201ENST00000220509 ATP8B2P98198 1209 aa12.43□□□□□ -0.42
VPS18-201ENST00000220509 TRDNQ13061 729 aa12.43□□□□□ -0.42
VPS18-201ENST00000220509 AKAP4Q5JQC9 854 aa12.43□□□□□ -0.42
VPS18-201ENST00000220509 IFNL2Q8IZJ0 200 aa12.43□□□□□ -0.42
VPS18-201ENST00000220509 HIP1O00291 1037 aa12.42□□□□□ -0.42
VPS18-201ENST00000220509 COPS6Q7L5N1 327 aa12.42□□□□□ -0.42
VPS18-201ENST00000220509 FBXW7Q969H0 707 aa12.42□□□□□ -0.42
VPS18-201ENST00000220509 IGSF1Q8N6C5 1336 aa12.42□□□□□ -0.42
VPS18-201ENST00000220509 DLC1Q96QB1 1528 aa12.42□□□□□ -0.42
VPS18-201ENST00000220509 PRAMEF22A3QJZ6 481 aa12.42□□□□□ -0.42
VPS18-201ENST00000220509 CCDC57Q2TAC2 916 aa12.42□□□□□ -0.42
VPS18-201ENST00000220509 RALYLQ86SE5 291 aaKnown RBP12.42□□□□□ -0.42
VPS18-201ENST00000220509 EFCC1Q9HA90 598 aa12.42□□□□□ -0.42
VPS18-201ENST00000220509 CALCOCO1Q9P1Z2 691 aa12.42□□□□□ -0.42
VPS18-201ENST00000220509 RSPH14Q9UHP6 348 aa12.42□□□□□ -0.42
VPS18-201ENST00000220509 GOLGA6L6A8MZA4 724 aa12.42□□□□□ -0.42
VPS18-201ENST00000220509 BLOC1S2Q6QNY1 142 aa12.42□□□□□ -0.42
VPS18-201ENST00000220509 XAGE3Q8WTP9 111 aa12.42□□□□□ -0.42
VPS18-201ENST00000220509 LRRC7Q96NW7 1537 aa12.41□□□□□ -0.42
VPS18-201ENST00000220509 CEBPZQ03701 1054 aaKnown RBP12.41□□□□□ -0.42
VPS18-201ENST00000220509 C16orf45Q96MC5 204 aaPredicted RBP12.41□□□□□ -0.42
VPS18-201ENST00000220509 CNNM1Q9NRU3 951 aa12.41□□□□□ -0.42
VPS18-201ENST00000220509 PDRG1Q9NUG6 133 aa12.41□□□□□ -0.42
VPS18-201ENST00000220509 REREQ9P2R6 1566 aa12.41□□□□□ -0.42
VPS18-201ENST00000220509 RNMTO43148 476 aaKnown RBP12.41□□□□□ -0.42
VPS18-201ENST00000220509 FMNL2Q96PY5 1086 aa12.41□□□□□ -0.42
VPS18-201ENST00000220509 ECHDC1Q9NTX5 307 aa12.41□□□□□ -0.42
VPS18-201ENST00000220509 CEP126Q9P2H0 1117 aa12.41□□□□□ -0.42
VPS18-201ENST00000220509 FERMT3Q86UX7 667 aa12.41□□□□□ -0.42
VPS18-201ENST00000220509 KIF2CQ99661 725 aa12.41□□□□□ -0.42
VPS18-201ENST00000220509 CDK12Q9NYV4 1490 aaPredicted RBP12.41□□□□□ -0.42
VPS18-201ENST00000220509 TECPR2O15040 1411 aa12.41□□□□□ -0.42
VPS18-201ENST00000220509 GADD45BO75293 160 aaPredicted RBP12.4□□□□□ -0.42
VPS18-201ENST00000220509 VPS37DQ86XT2 251 aa12.4□□□□□ -0.42
VPS18-201ENST00000220509 CCDC83Q8IWF9 413 aa12.4□□□□□ -0.42
VPS18-201ENST00000220509 CEP170BQ9Y4F5 1589 aaPredicted RBP12.4□□□□□ -0.42
VPS18-201ENST00000220509 BIRC2Q13490 618 aa12.4□□□□□ -0.42
VPS18-201ENST00000220509 NBPF9Q3BBW0 867 aa12.4□□□□□ -0.42
VPS18-201ENST00000220509 GIMAP6Q6P9H5 292 aa12.4□□□□□ -0.42
VPS18-201ENST00000220509 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.4□□□□□ -0.42
VPS18-201ENST00000220509 V9GYY5 206 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms