RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 ATP2C2O75185 946 aa17.22■□□□□ 0.35
NDFIP2-201ENST00000218652 CTNNA2P26232 953 aa17.22■□□□□ 0.35
NDFIP2-201ENST00000218652 SLC26A6Q9BXS9 759 aa17.22■□□□□ 0.35
NDFIP2-201ENST00000218652 DACT1Q9NYF0 836 aa17.22■□□□□ 0.35
NDFIP2-201ENST00000218652 TMOD3Q9NYL9 352 aa17.22■□□□□ 0.35
NDFIP2-201ENST00000218652 GCOM1H8Y6P7 765 aaPredicted RBP17.22■□□□□ 0.35
NDFIP2-201ENST00000218652 MYZAPP0CAP1 466 aa17.22■□□□□ 0.35
NDFIP2-201ENST00000218652 ZSCAN22P10073 491 aaPredicted RBP17.22■□□□□ 0.35
NDFIP2-201ENST00000218652 TNIP1Q15025 636 aa17.22■□□□□ 0.35
NDFIP2-201ENST00000218652 DDX46Q7L014 1031 aaKnown RBP17.22■□□□□ 0.35
NDFIP2-201ENST00000218652 CNPY2Q9Y2B0 182 aa17.22■□□□□ 0.35
NDFIP2-201ENST00000218652 PAXBP1Q9Y5B6 917 aa17.22■□□□□ 0.35
NDFIP2-201ENST00000218652 NF2P35240 595 aa17.22■□□□□ 0.35
NDFIP2-201ENST00000218652 SYKP43405 635 aa17.22■□□□□ 0.35
NDFIP2-201ENST00000218652 NAIPQ13075 1403 aa17.21■□□□□ 0.35
NDFIP2-201ENST00000218652 METAP2P50579 478 aaKnown RBP eCLIP17.21■□□□□ 0.35
NDFIP2-201ENST00000218652 MNAT1P51948 309 aa17.21■□□□□ 0.35
NDFIP2-201ENST00000218652 TRIM21P19474 475 aaKnown RBP17.21■□□□□ 0.35
NDFIP2-201ENST00000218652 MEIS3Q99687 375 aa17.21■□□□□ 0.35
NDFIP2-201ENST00000218652 ARFGAP3Q9NP61 516 aa17.21■□□□□ 0.35
NDFIP2-201ENST00000218652 MAP3K2Q9Y2U5 619 aa17.21■□□□□ 0.35
NDFIP2-201ENST00000218652 FBLN1P23142 703 aa17.21■□□□□ 0.35
NDFIP2-201ENST00000218652 ANO6Q4KMQ2 910 aa17.21■□□□□ 0.35
NDFIP2-201ENST00000218652 KRT222Q8N1A0 295 aa17.21■□□□□ 0.35
NDFIP2-201ENST00000218652 POTEB2H3BUK9 544 aa17.2■□□□□ 0.34
NDFIP2-201ENST00000218652 SCLT1Q96NL6 688 aa17.2■□□□□ 0.34
NDFIP2-201ENST00000218652 HYPKQ9NX55 129 aa17.2■□□□□ 0.34
NDFIP2-201ENST00000218652 SLC5A1P13866 664 aa17.2■□□□□ 0.34
NDFIP2-201ENST00000218652 AMOTQ4VCS5 1084 aa17.2■□□□□ 0.34
NDFIP2-201ENST00000218652 RHPN1Q8TCX5 695 aa17.2■□□□□ 0.34
NDFIP2-201ENST00000218652 TAOK3Q9H2K8 898 aa17.2■□□□□ 0.34
NDFIP2-201ENST00000218652 MBIPQ9NS73 344 aa17.2■□□□□ 0.34
NDFIP2-201ENST00000218652 PTPRCP08575 1304 aa17.2■□□□□ 0.34
NDFIP2-201ENST00000218652 ANKRD18BA2A2Z9 1011 aa17.2■□□□□ 0.34
NDFIP2-201ENST00000218652 CETN1Q12798 172 aa17.2■□□□□ 0.34
NDFIP2-201ENST00000218652 FAM200AQ8TCP9 573 aa17.2■□□□□ 0.34
NDFIP2-201ENST00000218652 TROQ12816 1431 aaPredicted RBP17.2■□□□□ 0.34
NDFIP2-201ENST00000218652 USP48Q86UV5 1035 aa17.2■□□□□ 0.34
NDFIP2-201ENST00000218652 TRIM47Q96LD4 638 aa17.2■□□□□ 0.34
NDFIP2-201ENST00000218652 TSPY2A6NKD2 308 aa17.19■□□□□ 0.34
NDFIP2-201ENST00000218652 IGSF3O75054 1194 aa17.19■□□□□ 0.34
NDFIP2-201ENST00000218652 AFMP43652 599 aa17.19■□□□□ 0.34
NDFIP2-201ENST00000218652 SLC4A8Q2Y0W8 1093 aa17.19■□□□□ 0.34
NDFIP2-201ENST00000218652 CALML4Q96GE6 196 aa17.19■□□□□ 0.34
NDFIP2-201ENST00000218652 ZNF652Q9Y2D9 606 aa17.19■□□□□ 0.34
NDFIP2-201ENST00000218652 KLF18A0A0U1RQI7 1052 aa17.19■□□□□ 0.34
NDFIP2-201ENST00000218652 CCDC150Q8NCX0 1101 aa17.19■□□□□ 0.34
NDFIP2-201ENST00000218652 DNAJC25Q9H1X3 360 aa17.19■□□□□ 0.34
NDFIP2-201ENST00000218652 POLA1P09884 1462 aaPredicted RBP17.19■□□□□ 0.34
NDFIP2-201ENST00000218652 PRIM1P49642 420 aaKnown RBP17.19■□□□□ 0.34
NDFIP2-201ENST00000218652 ZSCAN16Q9H4T2 348 aaPredicted RBP17.19■□□□□ 0.34
NDFIP2-201ENST00000218652 FSD2A1L4K1 749 aa17.18■□□□□ 0.34
NDFIP2-201ENST00000218652 LMOD1P29536 600 aaPredicted RBP17.18■□□□□ 0.34
NDFIP2-201ENST00000218652 NCOA7Q8NI08 942 aa17.18■□□□□ 0.34
NDFIP2-201ENST00000218652 STX8Q9UNK0 236 aa17.18■□□□□ 0.34
NDFIP2-201ENST00000218652 PRC1O43663 620 aa17.18■□□□□ 0.34
NDFIP2-201ENST00000218652 PTGS1P23219 599 aa17.18■□□□□ 0.34
NDFIP2-201ENST00000218652 AMPD3Q01432 767 aa17.18■□□□□ 0.34
NDFIP2-201ENST00000218652 WDR78Q5VTH9 848 aa17.18■□□□□ 0.34
NDFIP2-201ENST00000218652 DNM1Q05193 864 aaKnown RBP17.18■□□□□ 0.34
NDFIP2-201ENST00000218652 SPAG5Q96R06 1193 aa17.18■□□□□ 0.34
NDFIP2-201ENST00000218652 ZKSCAN5Q9Y2L8 839 aa17.18■□□□□ 0.34
NDFIP2-201ENST00000218652 MFSD6Q6ZSS7 791 aa17.17■□□□□ 0.34
NDFIP2-201ENST00000218652 DAPK1P53355 1430 aa17.17■□□□□ 0.34
NDFIP2-201ENST00000218652 ADGRF5Q8IZF2 1346 aa17.17■□□□□ 0.34
NDFIP2-201ENST00000218652 ZPR1O75312 459 aa17.17■□□□□ 0.34
NDFIP2-201ENST00000218652 MARCKSP29966 332 aaPredicted RBP17.17■□□□□ 0.34
NDFIP2-201ENST00000218652 PDE1AP54750 535 aa17.17■□□□□ 0.34
NDFIP2-201ENST00000218652 KANK3Q6NY19 840 aa17.17■□□□□ 0.34
NDFIP2-201ENST00000218652 TIGD1Q96MW7 591 aa17.17■□□□□ 0.34
NDFIP2-201ENST00000218652 NUCB1Q02818 461 aa17.16■□□□□ 0.34
NDFIP2-201ENST00000218652 SPECC1LQ69YQ0 1117 aa17.16■□□□□ 0.34
NDFIP2-201ENST00000218652 HMG20BQ9P0W2 317 aa17.16■□□□□ 0.34
NDFIP2-201ENST00000218652 RSPH14Q9UHP6 348 aa17.16■□□□□ 0.34
NDFIP2-201ENST00000218652 SERPINA10Q9UK55 444 aa17.16■□□□□ 0.34
NDFIP2-201ENST00000218652 HOMER2Q9NSB8 354 aa17.16■□□□□ 0.34
NDFIP2-201ENST00000218652 NBPF7P0C2Y1 421 aaPredicted RBP17.16■□□□□ 0.34
NDFIP2-201ENST00000218652 C16orf71Q8IYS4 520 aaPredicted RBP17.16■□□□□ 0.34
NDFIP2-201ENST00000218652 AOPEPQ8N6M6 819 aa17.16■□□□□ 0.34
NDFIP2-201ENST00000218652 FBF1Q8TES7 1133 aa17.16■□□□□ 0.34
NDFIP2-201ENST00000218652 ATRIPQ8WXE1 791 aa17.16■□□□□ 0.34
NDFIP2-201ENST00000218652 CCDC171Q6TFL3 1326 aa17.15■□□□□ 0.34
NDFIP2-201ENST00000218652 CEP112Q8N8E3 955 aa17.15■□□□□ 0.34
NDFIP2-201ENST00000218652 RBM8AQ9Y5S9 174 aaKnown RBP17.15■□□□□ 0.34
NDFIP2-201ENST00000218652 CTAGE15A4D2H0 777 aa17.15■□□□□ 0.34
NDFIP2-201ENST00000218652 CTAGE8P0CG41 777 aa17.15■□□□□ 0.34
NDFIP2-201ENST00000218652 KIF5BP33176 963 aa17.15■□□□□ 0.34
NDFIP2-201ENST00000218652 KIAA0753Q2KHM9 967 aa17.15■□□□□ 0.34
NDFIP2-201ENST00000218652 CTAGE6Q86UF2 777 aa17.15■□□□□ 0.34
NDFIP2-201ENST00000218652 CTAGE4Q8IX94 777 aa17.15■□□□□ 0.34
NDFIP2-201ENST00000218652 CUL5Q93034 780 aa17.15■□□□□ 0.34
NDFIP2-201ENST00000218652 RRAGBQ5VZM2 374 aa17.15■□□□□ 0.34
NDFIP2-201ENST00000218652 HDAC1Q13547 482 aaPredicted RBP17.14■□□□□ 0.34
NDFIP2-201ENST00000218652 PPP4R3AQ6IN85 833 aa17.14■□□□□ 0.34
NDFIP2-201ENST00000218652 MRPS27Q92552 414 aaKnown RBP17.14■□□□□ 0.34
NDFIP2-201ENST00000218652 C6orf229H3BNL8 230 aa17.14■□□□□ 0.33
NDFIP2-201ENST00000218652 ALG1Q9BT22 464 aa17.14■□□□□ 0.33
NDFIP2-201ENST00000218652 MMRN2Q9H8L6 949 aa17.14■□□□□ 0.33
NDFIP2-201ENST00000218652 ERICH3Q5RHP9 1530 aa17.14■□□□□ 0.33
NDFIP2-201ENST00000218652 SF3B2Q13435 895 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms