RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 RAD50Q92878 1312 aa11.55□□□□□ -0.56
CSTF1-201ENST00000217109 KINO60870 393 aaKnown RBP11.55□□□□□ -0.56
CSTF1-201ENST00000217109 ADCY5O95622 1261 aa11.55□□□□□ -0.56
CSTF1-201ENST00000217109 BRD1O95696 1058 aa11.55□□□□□ -0.56
CSTF1-201ENST00000217109 ZNF790Q6PG37 636 aa11.55□□□□□ -0.56
CSTF1-201ENST00000217109 CPLX2Q6PUV4 134 aaKnown RBP11.55□□□□□ -0.56
CSTF1-201ENST00000217109 GIGYF1O75420 1035 aaPredicted RBP11.55□□□□□ -0.56
CSTF1-201ENST00000217109 IFIT1P09914 478 aaKnown RBP11.55□□□□□ -0.56
CSTF1-201ENST00000217109 BRF1Q92994 677 aa11.55□□□□□ -0.56
CSTF1-201ENST00000217109 CNNM1Q9NRU3 951 aa11.55□□□□□ -0.56
CSTF1-201ENST00000217109 BABAM1Q9NWV8 329 aa11.55□□□□□ -0.56
CSTF1-201ENST00000217109 PTH1RQ03431 593 aa11.55□□□□□ -0.56
CSTF1-201ENST00000217109 ZNF445P59923 1031 aa11.54□□□□□ -0.56
CSTF1-201ENST00000217109 COL3A1P02461 1466 aaPredicted RBP11.54□□□□□ -0.56
CSTF1-201ENST00000217109 HAND2P61296 217 aa11.54□□□□□ -0.56
CSTF1-201ENST00000217109 TPM4P67936 248 aa11.54□□□□□ -0.56
CSTF1-201ENST00000217109 RAB11FIP4Q86YS3 637 aa11.54□□□□□ -0.56
CSTF1-201ENST00000217109 NEK1Q96PY6 1258 aa11.54□□□□□ -0.56
CSTF1-201ENST00000217109 CCDC171Q6TFL3 1326 aa11.54□□□□□ -0.56
CSTF1-201ENST00000217109 TFCP2Q12800 502 aa11.54□□□□□ -0.56
CSTF1-201ENST00000217109 ATP2B1P20020 1258 aa11.53□□□□□ -0.56
CSTF1-201ENST00000217109 CREBRFQ8IUR6 639 aa11.53□□□□□ -0.56
CSTF1-201ENST00000217109 ZNF496Q96IT1 587 aaPredicted RBP11.53□□□□□ -0.56
CSTF1-201ENST00000217109 TTC12Q9H892 705 aaPredicted RBP11.53□□□□□ -0.56
CSTF1-201ENST00000217109 NEURL4Q96JN8 1562 aa11.53□□□□□ -0.56
CSTF1-201ENST00000217109 HOXB7P09629 217 aa11.53□□□□□ -0.56
CSTF1-201ENST00000217109 KIF6Q6ZMV9 814 aa11.53□□□□□ -0.56
CSTF1-201ENST00000217109 EAF2Q96CJ1 260 aaPredicted RBP11.53□□□□□ -0.56
CSTF1-201ENST00000217109 STAP2Q9UGK3 403 aa11.53□□□□□ -0.56
CSTF1-201ENST00000217109 NSFL1CQ9UNZ2 370 aaKnown RBP11.53□□□□□ -0.56
CSTF1-201ENST00000217109 NLRP1Q9C000 1473 aa11.53□□□□□ -0.56
CSTF1-201ENST00000217109 STK38Q15208 465 aa11.53□□□□□ -0.56
CSTF1-201ENST00000217109 CCDC129Q6ZRS4 1044 aa11.53□□□□□ -0.56
CSTF1-201ENST00000217109 SCAND2PQ9GZW5 306 aaPredicted RBP11.53□□□□□ -0.56
CSTF1-201ENST00000217109 GPTP24298 496 aa11.52□□□□□ -0.56
CSTF1-201ENST00000217109 TRIM29Q14134 588 aa11.52□□□□□ -0.56
CSTF1-201ENST00000217109 RRP12Q5JTH9 1297 aaKnown RBP11.52□□□□□ -0.56
CSTF1-201ENST00000217109 RUFY3Q7L099 469 aa11.52□□□□□ -0.56
CSTF1-201ENST00000217109 CHST3Q7LGC8 479 aa11.52□□□□□ -0.56
CSTF1-201ENST00000217109 CHMP4CQ96CF2 233 aa11.52□□□□□ -0.56
CSTF1-201ENST00000217109 IDH1O75874 414 aaKnown RBP11.52□□□□□ -0.57
CSTF1-201ENST00000217109 TIMM10P62072 90 aa11.52□□□□□ -0.57
CSTF1-201ENST00000217109 ADCK5Q3MIX3 580 aa11.52□□□□□ -0.57
CSTF1-201ENST00000217109 CFAP45Q9UL16 551 aa11.52□□□□□ -0.57
CSTF1-201ENST00000217109 USP16Q9Y5T5 823 aa11.52□□□□□ -0.57
CSTF1-201ENST00000217109 VPS53Q5VIR6 699 aa11.51□□□□□ -0.57
CSTF1-201ENST00000217109 FILIP1Q7Z7B0 1213 aa11.51□□□□□ -0.57
CSTF1-201ENST00000217109 U3KPZ7 1027 aaPredicted RBP11.51□□□□□ -0.57
CSTF1-201ENST00000217109 ARHGEF28Q8N1W1 1705 aaKnown RBP11.51□□□□□ -0.57
CSTF1-201ENST00000217109 DBNDD2Q9BQY9 259 aa11.51□□□□□ -0.57
CSTF1-201ENST00000217109 DACT1Q9NYF0 836 aa11.51□□□□□ -0.57
CSTF1-201ENST00000217109 ZKSCAN5Q9Y2L8 839 aa11.51□□□□□ -0.57
CSTF1-201ENST00000217109 Q6ZUG5 572 aa11.51□□□□□ -0.57
CSTF1-201ENST00000217109 CWC25Q9NXE8 425 aaPredicted RBP11.51□□□□□ -0.57
CSTF1-201ENST00000217109 AOX1Q06278 1338 aa11.51□□□□□ -0.57
CSTF1-201ENST00000217109 METTL24Q5JXM2 366 aa11.5□□□□□ -0.57
CSTF1-201ENST00000217109 ZNF396Q96N95 335 aaPredicted RBP11.5□□□□□ -0.57
CSTF1-201ENST00000217109 C19orf44Q9H6X5 657 aa11.5□□□□□ -0.57
CSTF1-201ENST00000217109 SLC27A2O14975 620 aa11.5□□□□□ -0.57
CSTF1-201ENST00000217109 TLR7Q9NYK1 1049 aaKnown RBP11.5□□□□□ -0.57
CSTF1-201ENST00000217109 CRB1P82279 1406 aa11.5□□□□□ -0.57
CSTF1-201ENST00000217109 GCKRQ14397 625 aa11.49□□□□□ -0.57
CSTF1-201ENST00000217109 ZDHHC9Q9Y397 364 aa11.49□□□□□ -0.57
CSTF1-201ENST00000217109 A0A0D9SFI3 127 aa11.49□□□□□ -0.57
CSTF1-201ENST00000217109 TPD52L1Q16890 204 aaPredicted RBP11.49□□□□□ -0.57
CSTF1-201ENST00000217109 LSG1Q9H089 658 aaKnown RBP11.49□□□□□ -0.57
CSTF1-201ENST00000217109 TBC1D2BQ9UPU7 963 aa11.49□□□□□ -0.57
CSTF1-201ENST00000217109 ATP10DQ9P241 1426 aa11.49□□□□□ -0.57
CSTF1-201ENST00000217109 ME3Q16798 604 aa11.49□□□□□ -0.57
CSTF1-201ENST00000217109 MCMDC2Q4G0Z9 681 aa11.49□□□□□ -0.57
CSTF1-201ENST00000217109 HSP90AB3PQ58FF7 597 aa11.49□□□□□ -0.57
CSTF1-201ENST00000217109 SHPRHQ149N8 1683 aa11.49□□□□□ -0.57
CSTF1-201ENST00000217109 AKAP17AQ02040 695 aaKnown RBP11.49□□□□□ -0.57
CSTF1-201ENST00000217109 PI4K2BQ8TCG2 481 aa11.49□□□□□ -0.57
CSTF1-201ENST00000217109 TMOD3Q9NYL9 352 aa11.49□□□□□ -0.57
CSTF1-201ENST00000217109 HMG20BQ9P0W2 317 aa11.49□□□□□ -0.57
CSTF1-201ENST00000217109 MAP2P11137 1827 aaKnown RBP11.49□□□□□ -0.57
CSTF1-201ENST00000217109 RRP9O43818 475 aaKnown RBP11.48□□□□□ -0.57
CSTF1-201ENST00000217109 DHX16O60231 1041 aaKnown RBP11.48□□□□□ -0.57
CSTF1-201ENST00000217109 IMMTQ16891 758 aaKnown RBP11.48□□□□□ -0.57
CSTF1-201ENST00000217109 METTL22Q9BUU2 404 aaPredicted RBP11.48□□□□□ -0.57
CSTF1-201ENST00000217109 SLC52A2Q9HAB3 445 aa11.48□□□□□ -0.57
CSTF1-201ENST00000217109 TMEM131LA2VDJ0 1609 aa11.48□□□□□ -0.57
CSTF1-201ENST00000217109 ERBB4Q15303 1308 aa11.48□□□□□ -0.57
CSTF1-201ENST00000217109 SMC2O95347 1197 aa11.48□□□□□ -0.57
CSTF1-201ENST00000217109 IFIT5Q13325 482 aaKnown RBP11.48□□□□□ -0.57
CSTF1-201ENST00000217109 ARHGEF25Q86VW2 580 aa11.48□□□□□ -0.57
CSTF1-201ENST00000217109 VPS37DQ86XT2 251 aa11.48□□□□□ -0.57
CSTF1-201ENST00000217109 A1BGP04217 495 aa11.48□□□□□ -0.57
CSTF1-201ENST00000217109 POLR3DP05423 398 aaPredicted RBP11.48□□□□□ -0.57
CSTF1-201ENST00000217109 ZNF165P49910 485 aa11.48□□□□□ -0.57
CSTF1-201ENST00000217109 CUL4AQ13619 759 aa11.48□□□□□ -0.57
CSTF1-201ENST00000217109 ZNF594Q96JF6 807 aaPredicted RBP11.48□□□□□ -0.57
CSTF1-201ENST00000217109 SEC62Q99442 399 aaKnown RBP11.48□□□□□ -0.57
CSTF1-201ENST00000217109 CLTCQ00610 1675 aaKnown RBP11.48□□□□□ -0.57
CSTF1-201ENST00000217109 CCDC82Q8N4S0 544 aa11.47□□□□□ -0.57
CSTF1-201ENST00000217109 DCAF5Q96JK2 942 aa11.47□□□□□ -0.57
CSTF1-201ENST00000217109 CTNNA3Q9UI47 895 aa11.47□□□□□ -0.57
CSTF1-201ENST00000217109 PREX1Q8TCU6 1659 aa11.47□□□□□ -0.57
CSTF1-201ENST00000217109 NEURL1BA8MQ27 555 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms