RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 PTGER2P43116 358 aa25.54■■□□□ 1.68
RHBDD3-201ENST00000216085 ST5P78524 1137 aa25.54■■□□□ 1.68
RHBDD3-201ENST00000216085 BEND3Q5T5X7 828 aa25.54■■□□□ 1.68
RHBDD3-201ENST00000216085 ALDH1L1O75891 902 aa25.54■■□□□ 1.68
RHBDD3-201ENST00000216085 SGIP1Q9BQI5 828 aa25.54■■□□□ 1.68
RHBDD3-201ENST00000216085 PPP1R1BQ9UD71 204 aaPredicted RBP25.54■■□□□ 1.68
RHBDD3-201ENST00000216085 TRMT112Q9UI30 125 aaKnown RBP25.54■■□□□ 1.68
RHBDD3-201ENST00000216085 IGKV5-2P06315 115 aa25.53■■□□□ 1.68
RHBDD3-201ENST00000216085 CWF19L2Q2TBE0 894 aaKnown RBP25.53■■□□□ 1.68
RHBDD3-201ENST00000216085 ABCC4O15439 1325 aa25.53■■□□□ 1.68
RHBDD3-201ENST00000216085 AFDNP55196 1824 aaKnown RBP25.52■■□□□ 1.68
RHBDD3-201ENST00000216085 SUSD4Q5VX71 490 aa25.52■■□□□ 1.68
RHBDD3-201ENST00000216085 DZIP1LQ8IYY4 767 aaKnown RBP25.52■■□□□ 1.68
RHBDD3-201ENST00000216085 HSP90B1P14625 803 aaKnown RBP25.51■■□□□ 1.67
RHBDD3-201ENST00000216085 CLUAP1Q96AJ1 413 aa25.51■■□□□ 1.67
RHBDD3-201ENST00000216085 SH3TC1Q8TE82 1336 aa25.51■■□□□ 1.67
RHBDD3-201ENST00000216085 NTSR2O95665 410 aa25.5■■□□□ 1.67
RHBDD3-201ENST00000216085 GCKRQ14397 625 aa25.5■■□□□ 1.67
RHBDD3-201ENST00000216085 NRXN2Q9P2S2 1712 aa25.5■■□□□ 1.67
RHBDD3-201ENST00000216085 PRR5LQ6MZQ0 368 aa25.49■■□□□ 1.67
RHBDD3-201ENST00000216085 ZBTB38Q8NAP3 1195 aaPredicted RBP25.49■■□□□ 1.67
RHBDD3-201ENST00000216085 C9orf78Q9NZ63 289 aaPredicted RBP25.49■■□□□ 1.67
RHBDD3-201ENST00000216085 N4BP2Q86UW6 1770 aaPredicted RBP25.48■■□□□ 1.67
RHBDD3-201ENST00000216085 LRP5O75197 1615 aa25.48■■□□□ 1.67
RHBDD3-201ENST00000216085 RRP1P56182 461 aaKnown RBP25.48■■□□□ 1.67
RHBDD3-201ENST00000216085 INTS3Q68E01 1043 aaKnown RBP25.48■■□□□ 1.67
RHBDD3-201ENST00000216085 PCCAP05165 728 aaPredicted RBP25.47■■□□□ 1.67
RHBDD3-201ENST00000216085 NUTM1Q86Y26 1132 aa25.46■■□□□ 1.67
RHBDD3-201ENST00000216085 C10orf71Q711Q0 1435 aa25.46■■□□□ 1.67
RHBDD3-201ENST00000216085 PLIN1O60240 522 aa25.46■■□□□ 1.67
RHBDD3-201ENST00000216085 PDE3AQ14432 1141 aa25.46■■□□□ 1.67
RHBDD3-201ENST00000216085 KLHL34Q8N239 644 aa25.46■■□□□ 1.67
RHBDD3-201ENST00000216085 GRM8O00222 908 aa25.45■■□□□ 1.66
RHBDD3-201ENST00000216085 ERFEQ4G0M1 354 aa25.45■■□□□ 1.66
RHBDD3-201ENST00000216085 FAM89AQ96GI7 184 aa25.45■■□□□ 1.66
RHBDD3-201ENST00000216085 BRIP1Q9BX63 1249 aa25.44■■□□□ 1.66
RHBDD3-201ENST00000216085 CDHR2Q9BYE9 1310 aa25.44■■□□□ 1.66
RHBDD3-201ENST00000216085 PDE6BP35913 854 aa25.44■■□□□ 1.66
RHBDD3-201ENST00000216085 UBE3BQ7Z3V4 1068 aa25.44■■□□□ 1.66
RHBDD3-201ENST00000216085 ITPRIPQ8IWB1 547 aa25.44■■□□□ 1.66
RHBDD3-201ENST00000216085 TMEM57Q8N5G2 664 aa25.44■■□□□ 1.66
RHBDD3-201ENST00000216085 PDZRN3Q9UPQ7 1066 aa25.44■■□□□ 1.66
RHBDD3-201ENST00000216085 HDAC5Q9UQL6 1122 aa25.44■■□□□ 1.66
RHBDD3-201ENST00000216085 TNNQ9UQP3 1299 aa25.44■■□□□ 1.66
RHBDD3-201ENST00000216085 CD2APQ9Y5K6 639 aa25.44■■□□□ 1.66
RHBDD3-201ENST00000216085 RIC1Q4ADV7 1423 aa25.43■■□□□ 1.66
RHBDD3-201ENST00000216085 RTL5Q5HYW3 569 aaPredicted RBP25.43■■□□□ 1.66
RHBDD3-201ENST00000216085 IRS4O14654 1257 aaPredicted RBP25.42■■□□□ 1.66
RHBDD3-201ENST00000216085 ABCC12Q96J65 1359 aa25.42■■□□□ 1.66
RHBDD3-201ENST00000216085 H7C1W4 665 aa25.41■■□□□ 1.66
RHBDD3-201ENST00000216085 SLC10A5Q5PT55 438 aa25.41■■□□□ 1.66
RHBDD3-201ENST00000216085 PANK1Q8TE04 598 aa25.41■■□□□ 1.66
RHBDD3-201ENST00000216085 CCDC24Q8N4L8 307 aa25.41■■□□□ 1.66
RHBDD3-201ENST00000216085 NLRP3Q96P20 1036 aa25.41■■□□□ 1.66
RHBDD3-201ENST00000216085 CHMP4BQ9H444 224 aaKnown RBP25.41■■□□□ 1.66
RHBDD3-201ENST00000216085 SUPT16HQ9Y5B9 1047 aaKnown RBP25.4■■□□□ 1.66
RHBDD3-201ENST00000216085 RLBP1P12271 317 aa25.39■■□□□ 1.66
RHBDD3-201ENST00000216085 GNAI3P08754 354 aa25.39■■□□□ 1.65
RHBDD3-201ENST00000216085 UBTFL1P0CB47 393 aaPredicted RBP25.39■■□□□ 1.65
RHBDD3-201ENST00000216085 HCLS1P14317 486 aaPredicted RBP25.39■■□□□ 1.65
RHBDD3-201ENST00000216085 TGFB2P61812 414 aa25.39■■□□□ 1.65
RHBDD3-201ENST00000216085 KIF13BQ9NQT8 1826 aa25.38■■□□□ 1.65
RHBDD3-201ENST00000216085 UTYO14607 1347 aa25.38■■□□□ 1.65
RHBDD3-201ENST00000216085 PDE8AO60658 829 aa25.38■■□□□ 1.65
RHBDD3-201ENST00000216085 MVPQ14764 893 aaKnown RBP25.38■■□□□ 1.65
RHBDD3-201ENST00000216085 USP44Q9H0E7 712 aa25.38■■□□□ 1.65
RHBDD3-201ENST00000216085 DDX19BQ9UMR2 479 aa25.38■■□□□ 1.65
RHBDD3-201ENST00000216085 LAMB2P55268 1798 aa25.38■■□□□ 1.65
RHBDD3-201ENST00000216085 H0YIN7 160 aa25.37■■□□□ 1.65
RHBDD3-201ENST00000216085 JARID2Q92833 1246 aaPredicted RBP25.37■■□□□ 1.65
RHBDD3-201ENST00000216085 FHDC1Q9C0D6 1143 aaPredicted RBP25.37■■□□□ 1.65
RHBDD3-201ENST00000216085 SYNE4Q8N205 404 aa25.36■■□□□ 1.65
RHBDD3-201ENST00000216085 SRCAPQ6ZRS2 3230 aa25.36■■□□□ 1.65
RHBDD3-201ENST00000216085 NBPF7P0C2Y1 421 aaPredicted RBP25.36■■□□□ 1.65
RHBDD3-201ENST00000216085 CASP7P55210 303 aa25.35■■□□□ 1.65
RHBDD3-201ENST00000216085 C2CD5Q86YS7 1000 aa25.35■■□□□ 1.65
RHBDD3-201ENST00000216085 RPGRQ92834 1020 aaKnown RBP25.35■■□□□ 1.65
RHBDD3-201ENST00000216085 PLA2G12BQ9BX93 195 aa25.35■■□□□ 1.65
RHBDD3-201ENST00000216085 COG6Q9Y2V7 657 aa25.35■■□□□ 1.65
RHBDD3-201ENST00000216085 DDX60Q8IY21 1712 aaKnown RBP25.34■■□□□ 1.65
RHBDD3-201ENST00000216085 ANKRD31Q8N7Z5 1873 aa25.34■■□□□ 1.65
RHBDD3-201ENST00000216085 KLRG2A4D1S0 409 aaPredicted RBP25.33■■□□□ 1.65
RHBDD3-201ENST00000216085 MEIS3Q99687 375 aa25.33■■□□□ 1.65
RHBDD3-201ENST00000216085 CTSWP56202 376 aa25.33■■□□□ 1.65
RHBDD3-201ENST00000216085 CCDC152Q4G0S7 254 aa25.33■■□□□ 1.65
RHBDD3-201ENST00000216085 C20orf194Q5TEA3 1177 aa25.33■■□□□ 1.65
RHBDD3-201ENST00000216085 TNRC6CQ9HCJ0 1690 aaKnown RBP25.33■■□□□ 1.64
RHBDD3-201ENST00000216085 NPR1P16066 1061 aa25.32■■□□□ 1.64
RHBDD3-201ENST00000216085 CRY2Q49AN0 593 aa25.32■■□□□ 1.64
RHBDD3-201ENST00000216085 SF3B3Q15393 1217 aaKnown RBP25.31■■□□□ 1.64
RHBDD3-201ENST00000216085 MASTLQ96GX5 879 aa25.31■■□□□ 1.64
RHBDD3-201ENST00000216085 SYT17Q9BSW7 474 aa25.31■■□□□ 1.64
RHBDD3-201ENST00000216085 RBM17Q96I25 401 aaKnown RBP25.31■■□□□ 1.64
RHBDD3-201ENST00000216085 MYH3P11055 1940 aa25.3■■□□□ 1.64
RHBDD3-201ENST00000216085 GNAI2P04899 355 aa25.3■■□□□ 1.64
RHBDD3-201ENST00000216085 SRGNP10124 158 aa25.3■■□□□ 1.64
RHBDD3-201ENST00000216085 SUCLG2Q96I99 432 aa25.3■■□□□ 1.64
RHBDD3-201ENST00000216085 ZBTB7BO15156 539 aaPredicted RBP25.29■■□□□ 1.64
RHBDD3-201ENST00000216085 DPEP1P16444 411 aa25.29■■□□□ 1.64
RHBDD3-201ENST00000216085 CHRNA5P30532 468 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms