RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 TFCP2L1Q9NZI6 479 aa20.78■□□□□ 0.92
POLR2E-201ENST00000215587 PCDHB15Q9Y5E8 787 aa20.78■□□□□ 0.92
POLR2E-201ENST00000215587 UTYO14607 1347 aa20.78■□□□□ 0.92
POLR2E-201ENST00000215587 ANKRD36CQ5JPF3 1778 aa20.77■□□□□ 0.92
POLR2E-201ENST00000215587 GPTP24298 496 aa20.77■□□□□ 0.92
POLR2E-201ENST00000215587 ZNF827Q17R98 1081 aa20.77■□□□□ 0.92
POLR2E-201ENST00000215587 AMIGO3Q86WK7 504 aa20.77■□□□□ 0.92
POLR2E-201ENST00000215587 USP42Q9H9J4 1324 aaKnown RBP20.77■□□□□ 0.91
POLR2E-201ENST00000215587 NBPF7P0C2Y1 421 aaPredicted RBP20.76■□□□□ 0.91
POLR2E-201ENST00000215587 USPL1Q5W0Q7 1092 aa20.76■□□□□ 0.91
POLR2E-201ENST00000215587 ZNF34Q8IZ26 560 aa20.76■□□□□ 0.91
POLR2E-201ENST00000215587 FLAD1Q8NFF5 587 aa20.76■□□□□ 0.91
POLR2E-201ENST00000215587 RWDD1Q9H446 243 aaPredicted RBP20.76■□□□□ 0.91
POLR2E-201ENST00000215587 SRP68Q9UHB9 627 aaKnown RBP20.76■□□□□ 0.91
POLR2E-201ENST00000215587 NUP98P52948 1817 aa20.76■□□□□ 0.91
POLR2E-201ENST00000215587 C4AP0C0L4 1744 aa20.75■□□□□ 0.91
POLR2E-201ENST00000215587 PARP10Q53GL7 1025 aa20.75■□□□□ 0.91
POLR2E-201ENST00000215587 UBE3BQ7Z3V4 1068 aa20.75■□□□□ 0.91
POLR2E-201ENST00000215587 NLRP10Q86W26 655 aa20.75■□□□□ 0.91
POLR2E-201ENST00000215587 STK32BQ9NY57 414 aa20.75■□□□□ 0.91
POLR2E-201ENST00000215587 LRRFIP2Q9Y608 721 aaKnown RBP20.75■□□□□ 0.91
POLR2E-201ENST00000215587 CHD4Q14839 1912 aa20.74■□□□□ 0.91
POLR2E-201ENST00000215587 RPAP2Q8IXW5 612 aaPredicted RBP20.74■□□□□ 0.91
POLR2E-201ENST00000215587 ANO8Q9HCE9 1232 aaPredicted RBP20.74■□□□□ 0.91
POLR2E-201ENST00000215587 NIP7Q9Y221 180 aaKnown RBP eCLIP20.74■□□□□ 0.91
POLR2E-201ENST00000215587 CEP350Q5VT06 3117 aa20.73■□□□□ 0.91
POLR2E-201ENST00000215587 PTGER2P43116 358 aa20.73■□□□□ 0.91
POLR2E-201ENST00000215587 CEP85Q6P2H3 762 aa20.73■□□□□ 0.91
POLR2E-201ENST00000215587 ANKRD44Q8N8A2 993 aa20.73■□□□□ 0.91
POLR2E-201ENST00000215587 H7C1W4 665 aa20.72■□□□□ 0.91
POLR2E-201ENST00000215587 PCCAP05165 728 aaPredicted RBP20.72■□□□□ 0.91
POLR2E-201ENST00000215587 HDAC1Q13547 482 aaPredicted RBP20.72■□□□□ 0.91
POLR2E-201ENST00000215587 CENPQQ7L2Z9 268 aaPredicted RBP20.72■□□□□ 0.91
POLR2E-201ENST00000215587 SUCLG2Q96I99 432 aa20.72■□□□□ 0.91
POLR2E-201ENST00000215587 BCL2L12Q9HB09 334 aa20.72■□□□□ 0.91
POLR2E-201ENST00000215587 UBN2Q6ZU65 1347 aa20.72■□□□□ 0.91
POLR2E-201ENST00000215587 HMMRO75330 724 aa20.71■□□□□ 0.91
POLR2E-201ENST00000215587 ZBTB7AO95365 584 aa20.71■□□□□ 0.91
POLR2E-201ENST00000215587 PPP1R42Q7Z4L9 355 aa20.71■□□□□ 0.91
POLR2E-201ENST00000215587 ZBTB38Q8NAP3 1195 aaPredicted RBP20.71■□□□□ 0.91
POLR2E-201ENST00000215587 TRMT112Q9UI30 125 aaKnown RBP20.71■□□□□ 0.91
POLR2E-201ENST00000215587 MSH5O43196 834 aa20.7■□□□□ 0.9
POLR2E-201ENST00000215587 SLC15A2Q16348 729 aa20.7■□□□□ 0.9
POLR2E-201ENST00000215587 UTP14AQ9BVJ6 771 aaKnown RBP20.7■□□□□ 0.9
POLR2E-201ENST00000215587 PDGFDQ9GZP0 370 aaPredicted RBP20.7■□□□□ 0.9
POLR2E-201ENST00000215587 CASP7P55210 303 aa20.69■□□□□ 0.9
POLR2E-201ENST00000215587 RTL5Q5HYW3 569 aaPredicted RBP20.69■□□□□ 0.9
POLR2E-201ENST00000215587 TBC1D9BQ66K14 1250 aa20.69■□□□□ 0.9
POLR2E-201ENST00000215587 BICDL1Q6ZP65 573 aa20.69■□□□□ 0.9
POLR2E-201ENST00000215587 JARID2Q92833 1246 aaPredicted RBP20.69■□□□□ 0.9
POLR2E-201ENST00000215587 SETDB2Q96T68 719 aa20.69■□□□□ 0.9
POLR2E-201ENST00000215587 SYT17Q9BSW7 474 aa20.69■□□□□ 0.9
POLR2E-201ENST00000215587 FHDC1Q9C0D6 1143 aaPredicted RBP20.69■□□□□ 0.9
POLR2E-201ENST00000215587 IGHDP01880 384 aa20.68■□□□□ 0.9
POLR2E-201ENST00000215587 ATP8B2P98198 1209 aa20.68■□□□□ 0.9
POLR2E-201ENST00000215587 FAM89AQ96GI7 184 aa20.68■□□□□ 0.9
POLR2E-201ENST00000215587 BICC1Q9H694 974 aaKnown RBP20.68■□□□□ 0.9
POLR2E-201ENST00000215587 TUBGCP6Q96RT7 1819 aa20.68■□□□□ 0.9
POLR2E-201ENST00000215587 PNPLA7Q6ZV29 1317 aa20.68■□□□□ 0.9
POLR2E-201ENST00000215587 KDM2BQ8NHM5 1336 aa20.68■□□□□ 0.9
POLR2E-201ENST00000215587 CDHR2Q9BYE9 1310 aa20.68■□□□□ 0.9
POLR2E-201ENST00000215587 FAM177BA6PVY3 158 aa20.67■□□□□ 0.9
POLR2E-201ENST00000215587 GYS1P13807 737 aa20.67■□□□□ 0.9
POLR2E-201ENST00000215587 HSP90B1P14625 803 aaKnown RBP20.67■□□□□ 0.9
POLR2E-201ENST00000215587 SUSD4Q5VX71 490 aa20.67■□□□□ 0.9
POLR2E-201ENST00000215587 COL23A1Q86Y22 540 aaPredicted RBP20.67■□□□□ 0.9
POLR2E-201ENST00000215587 SIRT2Q8IXJ6 389 aa20.67■□□□□ 0.9
POLR2E-201ENST00000215587 NYXQ9GZU5 481 aa20.67■□□□□ 0.9
POLR2E-201ENST00000215587 SH3TC1Q8TE82 1336 aa20.67■□□□□ 0.9
POLR2E-201ENST00000215587 MTX1Q13505 466 aa20.66■□□□□ 0.9
POLR2E-201ENST00000215587 ATF5Q9Y2D1 282 aaPredicted RBP20.66■□□□□ 0.9
POLR2E-201ENST00000215587 CARMIL3Q8ND23 1372 aa20.66■□□□□ 0.9
POLR2E-201ENST00000215587 NTSR2O95665 410 aa20.65■□□□□ 0.9
POLR2E-201ENST00000215587 KAZALD1Q96I82 304 aa20.65■□□□□ 0.9
POLR2E-201ENST00000215587 QSER1Q2KHR3 1735 aa20.64■□□□□ 0.9
POLR2E-201ENST00000215587 PNMA6EA0A0J9YXQ4 647 aa20.64■□□□□ 0.89
POLR2E-201ENST00000215587 IRS4O14654 1257 aaPredicted RBP20.64■□□□□ 0.89
POLR2E-201ENST00000215587 SRGAP3O43295 1099 aa20.64■□□□□ 0.89
POLR2E-201ENST00000215587 NBPF5PQ86XG9 351 aaPredicted RBP20.64■□□□□ 0.89
POLR2E-201ENST00000215587 PLA2G12BQ9BX93 195 aa20.64■□□□□ 0.89
POLR2E-201ENST00000215587 COL24A1Q17RW2 1714 aa20.64■□□□□ 0.89
POLR2E-201ENST00000215587 GTF2E1P29083 439 aaPredicted RBP20.63■□□□□ 0.89
POLR2E-201ENST00000215587 FOXO4P98177 505 aa20.63■□□□□ 0.89
POLR2E-201ENST00000215587 NFIXQ14938 502 aa20.63■□□□□ 0.89
POLR2E-201ENST00000215587 RABL6Q3YEC7 729 aaPredicted RBP20.63■□□□□ 0.89
POLR2E-201ENST00000215587 EPHA10Q5JZY3 1008 aa20.63■□□□□ 0.89
POLR2E-201ENST00000215587 NLGN1Q8N2Q7 840 aa20.63■□□□□ 0.89
POLR2E-201ENST00000215587 SSH3Q8TE77 659 aa20.63■□□□□ 0.89
POLR2E-201ENST00000215587 GCC1Q96CN9 775 aa20.63■□□□□ 0.89
POLR2E-201ENST00000215587 NPHP1O15259 732 aa20.62■□□□□ 0.89
POLR2E-201ENST00000215587 POLA2Q14181 598 aa20.62■□□□□ 0.89
POLR2E-201ENST00000215587 LMBR1LQ6UX01 489 aa20.62■□□□□ 0.89
POLR2E-201ENST00000215587 MTFR1LQ9H019 292 aa20.62■□□□□ 0.89
POLR2E-201ENST00000215587 PDE8AO60658 829 aa20.61■□□□□ 0.89
POLR2E-201ENST00000215587 TPTE2Q6XPS3 522 aa20.61■□□□□ 0.89
POLR2E-201ENST00000215587 SMC5Q8IY18 1101 aa20.61■□□□□ 0.89
POLR2E-201ENST00000215587 SYNE4Q8N205 404 aa20.61■□□□□ 0.89
POLR2E-201ENST00000215587 CHMP3Q9Y3E7 222 aa20.61■□□□□ 0.89
POLR2E-201ENST00000215587 CTSWP56202 376 aa20.6■□□□□ 0.89
POLR2E-201ENST00000215587 NUTM1Q86Y26 1132 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms