RNA–Protein interactions for RNA: ENST00000209728.8

CDC6-201, Transcript of cell division cycle 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC6, Length 4,810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6-201ENST00000209728 SLC12A7Q9Y666 1083 aa14.71□□□□□ -0.05
CDC6-201ENST00000209728 PTPRTO14522 1441 aa14.71□□□□□ -0.05
CDC6-201ENST00000209728 SOS1Q07889 1333 aaPredicted RBP14.71□□□□□ -0.05
CDC6-201ENST00000209728 NEMFO60524 1076 aa14.71□□□□□ -0.05
CDC6-201ENST00000209728 IL13P35225 146 aa14.71□□□□□ -0.05
CDC6-201ENST00000209728 CT47A1Q5JQC4 288 aaPredicted RBP14.71□□□□□ -0.05
CDC6-201ENST00000209728 MAGI2Q86UL8 1455 aa14.71□□□□□ -0.05
CDC6-201ENST00000209728 ZSCAN16Q9H4T2 348 aaPredicted RBP14.71□□□□□ -0.05
CDC6-201ENST00000209728 POGZQ7Z3K3 1410 aa14.71□□□□□ -0.06
CDC6-201ENST00000209728 GOLGA8AA7E2F4 631 aa14.71□□□□□ -0.06
CDC6-201ENST00000209728 EIF3JO75822 258 aaKnown RBP14.71□□□□□ -0.06
CDC6-201ENST00000209728 IGHMBP2P38935 993 aaKnown RBP14.71□□□□□ -0.06
CDC6-201ENST00000209728 EIF5P55010 431 aaKnown RBP14.71□□□□□ -0.06
CDC6-201ENST00000209728 BICDL1Q6ZP65 573 aa14.71□□□□□ -0.06
CDC6-201ENST00000209728 CTDP1Q9Y5B0 961 aaPredicted RBP14.71□□□□□ -0.06
CDC6-201ENST00000209728 ZNF518AQ6AHZ1 1483 aa14.7□□□□□ -0.06
CDC6-201ENST00000209728 CDR1P51861 262 aa14.7□□□□□ -0.06
CDC6-201ENST00000209728 CCDC181Q5TID7 509 aa14.7□□□□□ -0.06
CDC6-201ENST00000209728 KSR2Q6VAB6 950 aa14.7□□□□□ -0.06
CDC6-201ENST00000209728 Q6ZUG5 572 aa14.7□□□□□ -0.06
CDC6-201ENST00000209728 CEP131Q9UPN4 1083 aa14.7□□□□□ -0.06
CDC6-201ENST00000209728 SSBP05455 408 aaKnown RBP eCLIP14.7□□□□□ -0.06
CDC6-201ENST00000209728 CEP135Q66GS9 1140 aa14.7□□□□□ -0.06
CDC6-201ENST00000209728 TMOD3Q9NYL9 352 aa14.7□□□□□ -0.06
CDC6-201ENST00000209728 ABCC10Q5T3U5 1492 aa14.7□□□□□ -0.06
CDC6-201ENST00000209728 GCC2Q8IWJ2 1684 aa14.7□□□□□ -0.06
CDC6-201ENST00000209728 GSDMDP57764 484 aa14.7□□□□□ -0.06
CDC6-201ENST00000209728 CGNQ9P2M7 1197 aaKnown RBP14.7□□□□□ -0.06
CDC6-201ENST00000209728 TTC21AQ8NDW8 1320 aa14.7□□□□□ -0.06
CDC6-201ENST00000209728 ABCC1P33527 1531 aa14.7□□□□□ -0.06
CDC6-201ENST00000209728 LDHAL6AQ6ZMR3 332 aa14.69□□□□□ -0.06
CDC6-201ENST00000209728 UBE2Q2Q8WVN8 375 aa14.69□□□□□ -0.06
CDC6-201ENST00000209728 LRRC59Q96AG4 307 aaKnown RBP14.69□□□□□ -0.06
CDC6-201ENST00000209728 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.69□□□□□ -0.06
CDC6-201ENST00000209728 ZFYVE9O95405 1425 aa14.69□□□□□ -0.06
CDC6-201ENST00000209728 POLR3GO15318 223 aaPredicted RBP14.69□□□□□ -0.06
CDC6-201ENST00000209728 TYRO3Q06418 890 aa14.69□□□□□ -0.06
CDC6-201ENST00000209728 SNW1Q13573 536 aaKnown RBP14.69□□□□□ -0.06
CDC6-201ENST00000209728 KIF4BQ2VIQ3 1234 aa14.69□□□□□ -0.06
CDC6-201ENST00000209728 SOGA3Q5TF21 947 aa14.69□□□□□ -0.06
CDC6-201ENST00000209728 TRMT112Q9UI30 125 aaKnown RBP14.69□□□□□ -0.06
CDC6-201ENST00000209728 MAP3K19Q56UN5 1328 aa14.69□□□□□ -0.06
CDC6-201ENST00000209728 SKILP12757 684 aa14.69□□□□□ -0.06
CDC6-201ENST00000209728 HS1BP3Q53T59 392 aa14.69□□□□□ -0.06
CDC6-201ENST00000209728 KLF18A0A0U1RQI7 1052 aa14.69□□□□□ -0.06
CDC6-201ENST00000209728 IARSP41252 1262 aaKnown RBP14.69□□□□□ -0.06
CDC6-201ENST00000209728 HSP90AA4PQ58FG1 418 aa14.69□□□□□ -0.06
CDC6-201ENST00000209728 IFNL2Q8IZJ0 200 aa14.69□□□□□ -0.06
CDC6-201ENST00000209728 CWC25Q9NXE8 425 aaPredicted RBP14.69□□□□□ -0.06
CDC6-201ENST00000209728 ALDH1L1O75891 902 aa14.68□□□□□ -0.06
CDC6-201ENST00000209728 CAVIN2O95810 425 aa14.68□□□□□ -0.06
CDC6-201ENST00000209728 MAP3K12Q12852 859 aa14.68□□□□□ -0.06
CDC6-201ENST00000209728 CHRNA2Q15822 529 aa14.68□□□□□ -0.06
CDC6-201ENST00000209728 CREB3L3Q68CJ9 461 aa14.68□□□□□ -0.06
CDC6-201ENST00000209728 LMBR1LQ6UX01 489 aa14.68□□□□□ -0.06
CDC6-201ENST00000209728 RIMS2Q9UQ26 1411 aa14.68□□□□□ -0.06
CDC6-201ENST00000209728 RANBP6O60518 1105 aaKnown RBP14.68□□□□□ -0.06
CDC6-201ENST00000209728 TRMT2AQ8IZ69 625 aaKnown RBP14.68□□□□□ -0.06
CDC6-201ENST00000209728 CCDC196A0A1B0GTZ2 297 aa14.68□□□□□ -0.06
CDC6-201ENST00000209728 SNRPA1P09661 255 aaKnown RBP14.68□□□□□ -0.06
CDC6-201ENST00000209728 KIAA1328Q86T90 577 aa14.68□□□□□ -0.06
CDC6-201ENST00000209728 YTHDC2Q9H6S0 1430 aaKnown RBP14.68□□□□□ -0.06
CDC6-201ENST00000209728 MAPK8IP2Q13387 824 aaPredicted RBP14.68□□□□□ -0.06
CDC6-201ENST00000209728 CHST3Q7LGC8 479 aa14.68□□□□□ -0.06
CDC6-201ENST00000209728 KRT28Q7Z3Y7 464 aa14.68□□□□□ -0.06
CDC6-201ENST00000209728 FLT4P35916 1363 aa14.67□□□□□ -0.06
CDC6-201ENST00000209728 CASQ1P31415 396 aa14.67□□□□□ -0.06
CDC6-201ENST00000209728 TSPYL1Q9H0U9 437 aa14.67□□□□□ -0.06
CDC6-201ENST00000209728 WDR7Q9Y4E6 1490 aa14.67□□□□□ -0.06
CDC6-201ENST00000209728 PTGS1P23219 599 aa14.67□□□□□ -0.06
CDC6-201ENST00000209728 SSRP1Q08945 709 aaKnown RBP14.67□□□□□ -0.06
CDC6-201ENST00000209728 PNMA6EA0A0J9YXQ4 647 aa14.67□□□□□ -0.06
CDC6-201ENST00000209728 CHL1O00533 1208 aa14.67□□□□□ -0.06
CDC6-201ENST00000209728 MCMDC2Q4G0Z9 681 aa14.67□□□□□ -0.06
CDC6-201ENST00000209728 TMEM67Q5HYA8 995 aa14.67□□□□□ -0.06
CDC6-201ENST00000209728 LINS1Q8NG48 757 aa14.67□□□□□ -0.06
CDC6-201ENST00000209728 TTC41PQ6P2S7 1318 aa14.67□□□□□ -0.06
CDC6-201ENST00000209728 KIF5CO60282 957 aa14.67□□□□□ -0.06
CDC6-201ENST00000209728 METAP2P50579 478 aaKnown RBP eCLIP14.67□□□□□ -0.06
CDC6-201ENST00000209728 FAM173BQ6P4H8 233 aa14.67□□□□□ -0.06
CDC6-201ENST00000209728 LUZP1Q86V48 1076 aa14.67□□□□□ -0.06
CDC6-201ENST00000209728 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.67□□□□□ -0.06
CDC6-201ENST00000209728 V9GYY5 206 aaPredicted RBP14.67□□□□□ -0.06
CDC6-201ENST00000209728 ZNF521Q96K83 1311 aa14.66□□□□□ -0.06
CDC6-201ENST00000209728 NCOA7Q8NI08 942 aa14.66□□□□□ -0.06
CDC6-201ENST00000209728 ZFYVE27Q5T4F4 411 aa14.66□□□□□ -0.06
CDC6-201ENST00000209728 GSPT1P15170 499 aaKnown RBP14.66□□□□□ -0.06
CDC6-201ENST00000209728 AOPEPQ8N6M6 819 aa14.66□□□□□ -0.06
CDC6-201ENST00000209728 CENPHQ9H3R5 247 aa14.66□□□□□ -0.06
CDC6-201ENST00000209728 ZSWIM4Q9H7M6 989 aa14.66□□□□□ -0.06
CDC6-201ENST00000209728 MAST1Q9Y2H9 1570 aa14.66□□□□□ -0.06
CDC6-201ENST00000209728 NPHP3Q7Z494 1330 aa14.66□□□□□ -0.06
CDC6-201ENST00000209728 TNRQ92752 1358 aa14.66□□□□□ -0.06
CDC6-201ENST00000209728 ANKRD18BA2A2Z9 1011 aa14.66□□□□□ -0.06
CDC6-201ENST00000209728 TRERF1Q96PN7 1200 aa14.66□□□□□ -0.06
CDC6-201ENST00000209728 SLC26A6Q9BXS9 759 aa14.66□□□□□ -0.06
CDC6-201ENST00000209728 LMBRD1Q9NUN5 540 aa14.66□□□□□ -0.06
CDC6-201ENST00000209728 PAXBP1Q9Y5B6 917 aa14.65□□□□□ -0.06
CDC6-201ENST00000209728 AKAP4Q5JQC9 854 aa14.65□□□□□ -0.06
CDC6-201ENST00000209728 RUFY3Q7L099 469 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms