RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 LIG1P18858 919 aa18■□□□□ 0.47
EFNB1-201ENST00000204961 KIAA2012Q0VF49 1180 aa18■□□□□ 0.47
EFNB1-201ENST00000204961 CLEC17AQ6ZS10 378 aa18■□□□□ 0.47
EFNB1-201ENST00000204961 LUZP1Q86V48 1076 aa18■□□□□ 0.47
EFNB1-201ENST00000204961 RUFY2Q8WXA3 655 aa18■□□□□ 0.47
EFNB1-201ENST00000204961 CCDC39Q9UFE4 941 aa18■□□□□ 0.47
EFNB1-201ENST00000204961 A0A0G2JLW4 131 aa18■□□□□ 0.47
EFNB1-201ENST00000204961 LARP1Q6PKG0 1096 aaKnown RBP18■□□□□ 0.47
EFNB1-201ENST00000204961 RAPGEF4Q8WZA2 1011 aa18■□□□□ 0.47
EFNB1-201ENST00000204961 ADCY9O60503 1353 aa17.99■□□□□ 0.47
EFNB1-201ENST00000204961 TIMM10P62072 90 aa17.99■□□□□ 0.47
EFNB1-201ENST00000204961 BLOC1S2Q6QNY1 142 aa17.99■□□□□ 0.47
EFNB1-201ENST00000204961 KSR2Q6VAB6 950 aa17.99■□□□□ 0.47
EFNB1-201ENST00000204961 RGPD8O14715 1765 aaPredicted RBP17.99■□□□□ 0.47
EFNB1-201ENST00000204961 ZNF594Q96JF6 807 aaPredicted RBP17.99■□□□□ 0.47
EFNB1-201ENST00000204961 USP31Q70CQ4 1352 aa17.98■□□□□ 0.47
EFNB1-201ENST00000204961 TFCP2Q12800 502 aa17.98■□□□□ 0.47
EFNB1-201ENST00000204961 ANAPC15P60006 121 aa17.98■□□□□ 0.47
EFNB1-201ENST00000204961 NEXNQ0ZGT2 675 aa17.98■□□□□ 0.47
EFNB1-201ENST00000204961 POLA2Q14181 598 aa17.98■□□□□ 0.47
EFNB1-201ENST00000204961 SIRT1Q96EB6 747 aa17.98■□□□□ 0.47
EFNB1-201ENST00000204961 ZNF496Q96IT1 587 aaPredicted RBP17.98■□□□□ 0.47
EFNB1-201ENST00000204961 ZBTB3Q9H5J0 574 aa17.98■□□□□ 0.47
EFNB1-201ENST00000204961 NRXN3Q9Y4C0 1643 aa17.98■□□□□ 0.47
EFNB1-201ENST00000204961 RPAP1Q9BWH6 1393 aaPredicted RBP17.98■□□□□ 0.47
EFNB1-201ENST00000204961 HAND2P61296 217 aa17.98■□□□□ 0.47
EFNB1-201ENST00000204961 MTMR6Q9Y217 621 aa17.98■□□□□ 0.47
EFNB1-201ENST00000204961 H3BQV1 296 aa17.97■□□□□ 0.47
EFNB1-201ENST00000204961 IFFO2Q5TF58 517 aa17.97■□□□□ 0.47
EFNB1-201ENST00000204961 DBNDD2Q9BQY9 259 aa17.97■□□□□ 0.47
EFNB1-201ENST00000204961 CCDC183Q5T5S1 534 aa17.97■□□□□ 0.47
EFNB1-201ENST00000204961 PROSER2Q86WR7 435 aaPredicted RBP17.97■□□□□ 0.47
EFNB1-201ENST00000204961 ZNF592Q92610 1267 aa17.97■□□□□ 0.47
EFNB1-201ENST00000204961 KAZALD1Q96I82 304 aa17.97■□□□□ 0.47
EFNB1-201ENST00000204961 NCOA5Q9HCD5 579 aaKnown RBP17.97■□□□□ 0.47
EFNB1-201ENST00000204961 DACT1Q9NYF0 836 aa17.97■□□□□ 0.47
EFNB1-201ENST00000204961 TTC6Q86TZ1 520 aa17.97■□□□□ 0.47
EFNB1-201ENST00000204961 INTS4Q96HW7 963 aaKnown RBP17.97■□□□□ 0.47
EFNB1-201ENST00000204961 CCDC171Q6TFL3 1326 aa17.96■□□□□ 0.47
EFNB1-201ENST00000204961 A0A087WZG4 1122 aa17.96■□□□□ 0.47
EFNB1-201ENST00000204961 AP5Z1O43299 807 aa17.96■□□□□ 0.47
EFNB1-201ENST00000204961 AKAP4Q5JQC9 854 aa17.96■□□□□ 0.47
EFNB1-201ENST00000204961 TTC14Q96N46 770 aa17.96■□□□□ 0.47
EFNB1-201ENST00000204961 SLC27A2O14975 620 aa17.96■□□□□ 0.47
EFNB1-201ENST00000204961 ST3GAL1Q11201 340 aa17.96■□□□□ 0.47
EFNB1-201ENST00000204961 HSP90AB4PQ58FF6 505 aa17.96■□□□□ 0.47
EFNB1-201ENST00000204961 OTUD7BQ6GQQ9 843 aa17.96■□□□□ 0.47
EFNB1-201ENST00000204961 TTC5Q8N0Z6 440 aa17.96■□□□□ 0.47
EFNB1-201ENST00000204961 KDRP35968 1356 aa17.96■□□□□ 0.47
EFNB1-201ENST00000204961 IGKV5-2P06315 115 aa17.95■□□□□ 0.46
EFNB1-201ENST00000204961 BRF1Q92994 677 aa17.95■□□□□ 0.46
EFNB1-201ENST00000204961 GOLIM4O00461 696 aa17.95■□□□□ 0.46
EFNB1-201ENST00000204961 PHF14O94880 888 aa17.95■□□□□ 0.46
EFNB1-201ENST00000204961 PLEKHG1Q9ULL1 1385 aa17.95■□□□□ 0.46
EFNB1-201ENST00000204961 ITSN1Q15811 1721 aa17.95■□□□□ 0.46
EFNB1-201ENST00000204961 IGSF3O75054 1194 aa17.95■□□□□ 0.46
EFNB1-201ENST00000204961 KRT28Q7Z3Y7 464 aa17.95■□□□□ 0.46
EFNB1-201ENST00000204961 FMNL2Q96PY5 1086 aa17.95■□□□□ 0.46
EFNB1-201ENST00000204961 SPATA31D1Q6ZQQ2 1576 aa17.94■□□□□ 0.46
EFNB1-201ENST00000204961 HTATSF1O43719 755 aaKnown RBP17.94■□□□□ 0.46
EFNB1-201ENST00000204961 DDX58O95786 925 aaKnown RBP17.94■□□□□ 0.46
EFNB1-201ENST00000204961 FKBP4Q02790 459 aaKnown RBP eCLIP17.94■□□□□ 0.46
EFNB1-201ENST00000204961 LRMPQ12912 555 aa17.94■□□□□ 0.46
EFNB1-201ENST00000204961 ISM2Q6H9L7 571 aa17.94■□□□□ 0.46
EFNB1-201ENST00000204961 SYTL4Q96C24 671 aaPredicted RBP17.94■□□□□ 0.46
EFNB1-201ENST00000204961 PDLIM2Q96JY6 352 aa17.94■□□□□ 0.46
EFNB1-201ENST00000204961 SPATA32Q96LK8 384 aa17.94■□□□□ 0.46
EFNB1-201ENST00000204961 NRBP1Q9UHY1 535 aa17.94■□□□□ 0.46
EFNB1-201ENST00000204961 NPHP1O15259 732 aa17.93■□□□□ 0.46
EFNB1-201ENST00000204961 UBE2HP62256 183 aa17.93■□□□□ 0.46
EFNB1-201ENST00000204961 ANKLE2Q86XL3 938 aa17.93■□□□□ 0.46
EFNB1-201ENST00000204961 FAM184AQ8NB25 1140 aa17.93■□□□□ 0.46
EFNB1-201ENST00000204961 VPS53Q5VIR6 699 aa17.93■□□□□ 0.46
EFNB1-201ENST00000204961 LMBR1LQ6UX01 489 aa17.93■□□□□ 0.46
EFNB1-201ENST00000204961 EVI5LQ96CN4 794 aa17.93■□□□□ 0.46
EFNB1-201ENST00000204961 TRIM5Q9C035 493 aa17.93■□□□□ 0.46
EFNB1-201ENST00000204961 GPHNQ9NQX3 736 aaPredicted RBP17.93■□□□□ 0.46
EFNB1-201ENST00000204961 PYCARDQ9ULZ3 195 aa17.92■□□□□ 0.46
EFNB1-201ENST00000204961 PTGS1P23219 599 aa17.92■□□□□ 0.46
EFNB1-201ENST00000204961 ZBTB9Q96C00 473 aa17.92■□□□□ 0.46
EFNB1-201ENST00000204961 ZHX1Q9UKY1 873 aaPredicted RBP17.92■□□□□ 0.46
EFNB1-201ENST00000204961 Q6ZUG5 572 aa17.92■□□□□ 0.46
EFNB1-201ENST00000204961 TNMDQ9H2S6 317 aa17.92■□□□□ 0.46
EFNB1-201ENST00000204961 ZNF790Q6PG37 636 aa17.91■□□□□ 0.46
EFNB1-201ENST00000204961 ANKRD13DQ6ZTN6 518 aa17.91■□□□□ 0.46
EFNB1-201ENST00000204961 DNAJC25Q9H1X3 360 aa17.91■□□□□ 0.46
EFNB1-201ENST00000204961 GJB4Q9NTQ9 266 aa17.91■□□□□ 0.46
EFNB1-201ENST00000204961 C3P01024 1663 aa17.91■□□□□ 0.46
EFNB1-201ENST00000204961 SPDYE4A6NLX3 237 aa17.91■□□□□ 0.46
EFNB1-201ENST00000204961 APOBRQ0VD83 1088 aa17.91■□□□□ 0.46
EFNB1-201ENST00000204961 NOLC1Q14978 699 aaKnown RBP eCLIP17.91■□□□□ 0.46
EFNB1-201ENST00000204961 TTLL5Q6EMB2 1281 aa17.91■□□□□ 0.46
EFNB1-201ENST00000204961 LINS1Q8NG48 757 aa17.91■□□□□ 0.46
EFNB1-201ENST00000204961 DBNLQ9UJU6 430 aaKnown RBP17.91■□□□□ 0.46
EFNB1-201ENST00000204961 STRN4Q9NRL3 753 aa17.9■□□□□ 0.46
EFNB1-201ENST00000204961 DIP2BQ9P265 1576 aa17.9■□□□□ 0.46
EFNB1-201ENST00000204961 KRT85P78386 507 aa17.9■□□□□ 0.46
EFNB1-201ENST00000204961 ANO6Q4KMQ2 910 aa17.9■□□□□ 0.46
EFNB1-201ENST00000204961 ATP6V1DQ9Y5K8 247 aa17.9■□□□□ 0.46
EFNB1-201ENST00000204961 A1BGP04217 495 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms